chr15 : 75,195,843 75,196,256
413 bp 103 TFs 1 linked gene
This 413 bp open chromatin element is linked to C15orf39 and is bound by 103 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
C15orf39 5.6 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr15:75,190,843 – 75,201,256
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
103 transcription factors
Source
Cell type
AGO1 1 dataset
ChIP Hep-G2 ENCSR555ZMV.AGO1.Hep-G2 196 bp overlap
ASCL1 4 datasets
ChIP NCI-H2107 GSE69394.ASCL1.NCI-H2107 137 bp overlap
ChIP NCI-H889 GSE69394.ASCL1.NCI-H889 112 bp overlap
ChIP SCLC_ASCLP GSE61197.ASCL1.SCLC_ASCLP 100 bp overlap
ChIP SCLC_ASCLP GSE61197.ASCL1.SCLC_ASCLP 163 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 413 bp overlap
ASXL3 2 datasets
ChIP NCI-H1963_Ab1 GSE145028.ASXL3.NCI-H1963_Ab1 366 bp overlap
ChIP NCI-H1963_Ab2 GSE145028.ASXL3.NCI-H1963_Ab2 371 bp overlap
BAP1 1 dataset
ChIP NCI-H1963_shNONT GSE145028.BAP1.NCI-H1963_shNONT 154 bp overlap
BCOR 1 dataset
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 156 bp overlap
BRD4 9 datasets
ChIP MCF-10A ERP003925.BRD4.MCF-10A 316 bp overlap
ChIP NCI-H1963 GSE145028.BRD4.NCI-H1963 413 bp overlap
ChIP NCI-H1963_dBET6 GSE145028.BRD4.NCI-H1963_dBET6 342 bp overlap
ChIP NCI-H1963_shASXL3 GSE145028.BRD4.NCI-H1963_shASXL3 413 bp overlap
ChIP NCI-H1963_shNONT GSE145028.BRD4.NCI-H1963_shNONT 413 bp overlap
ChIP retina_AB1-FW13 GSE86981.BRD4.retina_AB1-FW13 97 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 340 bp overlap
ChIP retina_AB1-FW20 GSE86981.BRD4.retina_AB1-FW20 220 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 413 bp overlap
CDK9 1 dataset
ChIP HCT-116 GSE72622.CDK9.HCT-116 171 bp overlap
CHD1 2 datasets
ChIP HeLa-S3 ENCSR392EAA.CHD1.HeLa-S3 114 bp overlap
ChIP hMSC-TERT GSE89179.CHD1.hMSC-TERT 399 bp overlap
CTCF 1 dataset
ChIP neural cell ENCFF335ADI 120 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF335XTP 162 bp overlap
E2F6 3 datasets
ChIP H1 ENCFF785DWK 231 bp overlap
ChIP H1 ENCFF785DWK 295 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 211 bp overlap
EGR1 1 dataset
ChIP A-375 GSE116190.EGR1.A-375 150 bp overlap
EGR2 1 dataset
ChIP HEK293 ENCFF336LFH 301 bp overlap
ERG 4 datasets
ChIP MCF-7 GSE23730.ERG.MCF-7 86 bp overlap
ChIP ME-1 GSE46044.ERG.ME-1 200 bp overlap
ChIP SEM GSE117864.ERG.SEM 337 bp overlap
ChIP TSU-1621MT GSE60477.ERG.TSU-1621MT 125 bp overlap
ESR1 5 datasets
ChIP Ishikawa_DMSO GSE132426.ESR1.Ishikawa_DMSO 160 bp overlap
ChIP Ishikawa_DMSO_D538G_clone3 GSE132426.ESR1.Ishikawa_DMSO_D538G_clone3 245 bp overlap
ChIP Ishikawa_E2 GSE132426.ESR1.Ishikawa_E2 377 bp overlap
ChIP Ishikawa_E2_D538G_clone2 GSE132426.ESR1.Ishikawa_E2_D538G_clone2 331 bp overlap
ChIP MCF-7_DHT GSE99626.ESR1.MCF-7_DHT 271 bp overlap
FLI1 2 datasets
ChIP UAE GSE23730.FLI1.UAE 213 bp overlap
ChIP UAE_ZINC GSE23730.FLI1.UAE_ZINC 150 bp overlap
FOXO1 1 dataset
ChIP CD34 GSE80773.FOXO1.CD34 203 bp overlap
GLIS1 2 datasets
ChIP HEK293 ENCFF299RSE 363 bp overlap
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 413 bp overlap
GLIS2 1 dataset
ChIP HEK293 ENCSR535DIA.GLIS2.HEK293 413 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 413 bp overlap
HCFC1R1 1 dataset
ChIP cartilage GSE100311.HCFC1R1.cartilage 111 bp overlap
HDAC2 2 datasets
ChIP H1 ENCFF353UJQ 413 bp overlap
ChIP WA01 ENCSR000AVB.HDAC2.WA01 320 bp overlap
HEXIM1 1 dataset
ChIP HCT-116 GSE72622.HEXIM1.HCT-116 249 bp overlap
HIF1A 1 dataset
ChIP BEAS-2B_arsenic GSE145834.HIF1A.BEAS-2B_arsenic 266 bp overlap
HNRNPK 1 dataset
ChIP Hep-G2 GSE120104.HNRNPK.Hep-G2 134 bp overlap
HNRNPL 2 datasets
ChIP Hep-G2 ENCSR315JJE.HNRNPL.Hep-G2 246 bp overlap
ChIP Hep-G2 GSE120104.HNRNPL.Hep-G2 252 bp overlap
HNRNPLL 2 datasets
ChIP Hep-G2 ENCSR804HMZ.HNRNPLL.Hep-G2 342 bp overlap
ChIP Hep-G2 GSE120104.HNRNPLL.Hep-G2 265 bp overlap
JUN 3 datasets
ChIP DE_D2 S54-DE-d2-JUN-exp2 197 bp overlap
ChIP ESC S34-ESC-d0-JUN-exp2 216 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 158 bp overlap
JUND 2 datasets
ChIP H1 ENCFF468JZD 200 bp overlap
ChIP WA01 ENCSR000BKP.JUND.WA01 99 bp overlap
KDM4A 1 dataset
ChIP WA01 ENCSR000AVC.KDM4A.WA01 289 bp overlap
KDM5B 1 dataset
ChIP T-47D GSE46055.KDM5B.T-47D 135 bp overlap
KLF1 2 datasets
ChIP HEK293 ENCFF159QSW 362 bp overlap
ChIP HEK293 ENCSR859BMR.KLF1.HEK293 364 bp overlap
KLF17 3 datasets
ChIP HEK293 ENCFF658MHR 268 bp overlap
ChIP HEK293 ENCFF658MHR 364 bp overlap
ChIP HEK293 ENCSR065WUF.KLF17.HEK293 413 bp overlap
KLF9 1 dataset
ChIP GBM1A GSE62211.KLF9.GBM1A 307 bp overlap
KMT2A 1 dataset
ChIP RCH-ACV GSE83671.KMT2A.RCH-ACV 150 bp overlap
MAX 5 datasets
ChIP H1 ENCFF914VQY 146 bp overlap
ChIP NCI-H128 GSE41105.MAX.NCI-H128 337 bp overlap
ChIP NCI-H2171 GSE41105.MAX.NCI-H2171 413 bp overlap
ChIP NCI-H2171 GSE36354.MAX.NCI-H2171 413 bp overlap
ChIP P493-6_24HR GSE125863.MAX.P493-6_24HR 220 bp overlap
MAZ 2 datasets
ChIP HEK293 ENCSR290SSQ.MAZ.HEK293 413 bp overlap
ChIP HEK293 GSE76494.MAZ.HEK293 200 bp overlap
MED1 2 datasets
ChIP HUVEC-C_siCTL GSE124892.MED1.HUVEC-C_siCTL 236 bp overlap
ChIP NCI-H2171 GSE36354.MED1.NCI-H2171 406 bp overlap
MTA2 1 dataset
ChIP RH4 GSE155861.MTA2.RH4 192 bp overlap
MYC 2 datasets
ChIP NCI-H128 GSE41105.MYC.NCI-H128 413 bp overlap
ChIP NCI-H2171 GSE36354.MYC.NCI-H2171 413 bp overlap
MYCN 3 datasets
ChIP COG-N-415 GSE138295.MYCN.COG-N-415 248 bp overlap
ChIP Kelly GSE94782.MYCN.Kelly 106 bp overlap
ChIP LA-N-5 GSE138295.MYCN.LA-N-5 355 bp overlap
MYNN 1 dataset
ChIP Hep-G2 ENCSR398TMP.MYNN.Hep-G2 184 bp overlap
MYOCD 1 dataset
ChIP A-549 GSE128921.MYOCD.A-549 330 bp overlap
MYOD1 2 datasets
ChIP IMR-90_GM GSE128527.MYOD1.IMR-90_GM 328 bp overlap
ChIP myoblast GSE50413.MYOD1.myoblast 193 bp overlap
NCAPH2 1 dataset
ChIP HEK293 GSE97540.NCAPH2.HEK293 208 bp overlap
NELFE 1 dataset
ChIP K-562_NHS GSE112379.NELFE.K-562_NHS 69 bp overlap
NFIA 1 dataset
ChIP HepG2 ENCFF815HWK 391 bp overlap
NFIC 3 datasets
ChIP Ishikawa ENCSR000BUT.NFIC.Ishikawa 133 bp overlap
ChIP K-562 ENCSR796ITY.NFIC.K-562 230 bp overlap
ChIP K562 ENCFF167YID 413 bp overlap
OGG1 4 datasets
ChIP HEK293 GSE89017.OGG1.HEK293 225 bp overlap
ChIP HEK293_15min GSE89017.OGG1.HEK293_15min 262 bp overlap
ChIP HEK293_30_min GSE89017.OGG1.HEK293_30_min 133 bp overlap
ChIP HEK293_60_min GSE89017.OGG1.HEK293_60_min 311 bp overlap
OLIG2 1 dataset
ChIP brain-prefrontal-cortex_2018006 GSE129039.OLIG2.brain-prefrontal-cortex_2018006 169 bp overlap
PATZ1 3 datasets
ChIP HEK293 ENCFF016MNJ 87 bp overlap
ChIP HEK293 ENCFF016MNJ 287 bp overlap
ChIP HEK293 ENCSR966ULI.PATZ1.HEK293 348 bp overlap
PBX1 1 dataset
ChIP RCH-ACV GSE85988.PBX1.RCH-ACV 82 bp overlap
PCBP1 2 datasets
ChIP Hep-G2 ENCSR872EVQ.PCBP1.Hep-G2 244 bp overlap
ChIP Hep-G2 GSE120104.PCBP1.Hep-G2 278 bp overlap
PCGF1 1 dataset
ChIP WA01 GSE104690.PCGF1.WA01 386 bp overlap
POLR2A 1 dataset
ChIP upper lobe of left lung ENCFF640VPA 87 bp overlap
POU5F1 1 dataset
ChIP SKM-1 GSE93706.POU5F1.SKM-1 75 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 368 bp overlap
PRDM10 1 dataset
ChIP HEK293 ENCFF145WQQ 207 bp overlap
PRDM15 1 dataset
ChIP WTC11 ENCFF108TMF 345 bp overlap
PTBP1 2 datasets
ChIP Hep-G2 ENCSR156APP.PTBP1.Hep-G2 140 bp overlap
ChIP Hep-G2 GSE120104.PTBP1.Hep-G2 131 bp overlap
RARA 1 dataset
ChIP TSU-1621MT GSE60477.RARA.TSU-1621MT 257 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 150 bp overlap
RORC 1 dataset
ChIP HCC70_XY018 GSE126380.RORC.HCC70_XY018 143 bp overlap
RUNX1 4 datasets
ChIP AML GSE111821.RUNX1.AML 166 bp overlap
ChIP AML_Blast GSE60130.RUNX1.AML_Blast 135 bp overlap
ChIP BCP-ALL_patient1 GSE109377.RUNX1.BCP-ALL_patient1 206 bp overlap
ChIP CD34 GSE64862.RUNX1.CD34 135 bp overlap
RUNX1T1 1 dataset
ChIP Kasumi-1_CEBPA-ER_E2 GSE102697.RUNX1T1.Kasumi-1_CEBPA-ER_E2 114 bp overlap
RUNX2 1 dataset
ChIP Karpas-45 GSE151819.RUNX2.Karpas-45 112 bp overlap
RYBP 1 dataset
ChIP WA01 GSE104690.RYBP.WA01 201 bp overlap
SIN3A 1 dataset
ChIP WA01 ENCSR000EBO.SIN3A.WA01 124 bp overlap
SP1 4 datasets
ChIP HEK293 GSE76494.SP1.HEK293 187 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 228 bp overlap
ChIP WTC11 ENCFF688PEU 399 bp overlap
ChIP WTC11 ENCFF688PEU 197 bp overlap
SP2 1 dataset
ChIP HEK293 ENCSR807LQP.SP2.HEK293 208 bp overlap
SP7 1 dataset
ChIP HEK293 ENCFF733RBE 264 bp overlap
SREBP2 2 datasets
ChIP HCC70 GSE126380.SREBP2.HCC70 227 bp overlap
ChIP HCC70_XY018 GSE126380.SREBP2.HCC70_XY018 234 bp overlap
SRSF7 1 dataset
ChIP Hep-G2 GSE120104.SRSF7.Hep-G2 278 bp overlap
SS18 2 datasets
ChIP Aska-SS_BAF47KO1 GSE108025.SS18.Aska-SS_BAF47KO1 184 bp overlap
ChIP SYO-1 GSE108025.SS18.SYO-1 264 bp overlap
STAT3 1 dataset
ChIP WA01 ERP004237.STAT3.WA01 210 bp overlap
SUZ12 1 dataset
ChIP CRL-7250_shSS18 GSE108025.SUZ12.CRL-7250_shSS18 146 bp overlap
TAF15 3 datasets
ChIP Hep-G2 ENCSR825MZS.TAF15.Hep-G2 66 bp overlap
ChIP Hep-G2 GSE120104.TAF15.Hep-G2 99 bp overlap
ChIP K-562 ENCSR047LSJ.TAF15.K-562 218 bp overlap
TCF12 4 datasets
ChIP H1 ENCFF203EBH 171 bp overlap
ChIP Ishikawa ENCFF467DDW 81 bp overlap
ChIP WA01 ENCSR000BIT.TCF12.WA01 191 bp overlap
ChIP WA01 ENCSR000BIT.TCF12.WA01 121 bp overlap
TCF21 1 dataset
ChIP HCASMC GSE124011.TCF21.HCASMC 171 bp overlap
TCF3 2 datasets
ChIP NPC GSE154479.TCF3.NPC 356 bp overlap
ChIP RCH-ACV GSE85988.TCF3.RCH-ACV 388 bp overlap
TCF4 2 datasets
ChIP CAL-1 GSE76147.TCF4.CAL-1 107 bp overlap
ChIP CAL-1 GSE76147.TCF4.CAL-1 105 bp overlap
TFIIIC 1 dataset
ChIP HEK293 GSE119418.TFIIIC.HEK293 240 bp overlap
TP63 1 dataset
ChIP keratinocyte_diff GSE33571.TP63.keratinocyte_diff 221 bp overlap
TWIST1 2 datasets
ChIP BE2C GSE80151.TWIST1.BE2C 248 bp overlap
ChIP SK-N-BE2-C GSE80151.TWIST1.SK-N-BE2-C 248 bp overlap
USF2 1 dataset
ChIP WTC11 ENCFF139JAW 276 bp overlap
ZBTB10 3 datasets
ChIP HEK293 ENCFF679BCK 166 bp overlap
ChIP HEK293 ENCFF679BCK 369 bp overlap
ChIP HEK293 ENCSR004PLU.ZBTB10.HEK293 230 bp overlap
ZBTB20 2 datasets
ChIP HEK293 ENCFF524ADK 380 bp overlap
ChIP HEK293 ENCSR460MBI.ZBTB20.HEK293 262 bp overlap
ZBTB33 1 dataset
ChIP WTC11 ENCFF048CFR 324 bp overlap
ZBTB42 1 dataset
ChIP HEK293 GSE76494.ZBTB42.HEK293 173 bp overlap
ZBTB7A 2 datasets
ChIP Ishikawa ENCSR000BSZ.ZBTB7A.Ishikawa 50 bp overlap
ChIP Ishikawa ENCSR000BSZ.ZBTB7A.Ishikawa 207 bp overlap
ZBTB8A 2 datasets
ChIP HEK293 ENCFF303WRD 192 bp overlap
ChIP HEK293 ENCSR481FEC.ZBTB8A.HEK293 128 bp overlap
ZFX 1 dataset
ChIP HEK293T_FLAG GSE145160.ZFX.HEK293T_FLAG 413 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 413 bp overlap
ZNF398 2 datasets
ChIP HEK293 ENCFF184XEW 272 bp overlap
ChIP HEK293 ENCSR676ZEF.ZNF398.HEK293 413 bp overlap
ZNF423 1 dataset
ChIP WTC11 ENCFF574PBR 317 bp overlap
ZNF467 1 dataset
ChIP HEK293 GSE76494.ZNF467.HEK293 211 bp overlap
ZNF600 1 dataset
ChIP HEK293 ENCFF785JSX 330 bp overlap
ZNF687 2 datasets
ChIP HepG2 ENCFF653WIX 274 bp overlap
ChIP HepG2 ENCFF653WIX 413 bp overlap