chr13 : 112,053,492 112,054,375
883 bp 96 TFs 0 linked genes
This 883 bp open chromatin element has no linked target genes and is bound by 96 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr13:112,048,492 – 112,059,375
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
96 transcription factors
Source
Cell type
AATF 1 dataset
ChIP NALM-6 GSE93626.AATF.NALM-6 277 bp overlap
AGO1 2 datasets
ChIP Hep-G2 ENCSR555ZMV.AGO1.Hep-G2 281 bp overlap
ChIP Hep-G2 GSE120104.AGO1.Hep-G2 281 bp overlap
AR 2 datasets
ChIP VCaP GSE92347.AR.VCaP 130 bp overlap
ChIP VCaP_DHT GSE79128.AR.VCaP_DHT 338 bp overlap
ARNTL 1 dataset
ChIP NSC_hNP1 GSE134972.ARNTL.NSC_hNP1 209 bp overlap
ASH2L 3 datasets
ChIP H1 ENCFF399KAM 621 bp overlap
ChIP H1 ENCFF399KAM 400 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 856 bp overlap
BCOR 1 dataset
ChIP WA01_KDM2B_KO GSE104690.BCOR.WA01_KDM2B_KO 883 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 147 bp overlap
BRD4 11 datasets
ChIP CLL_patient2_4h_CpG_BET GSE109411.BRD4.CLL_patient2_4h_CpG_BET 193 bp overlap
ChIP CLL_patient3_4h_CpG GSE109411.BRD4.CLL_patient3_4h_CpG 208 bp overlap
ChIP COLO-741 GSE73319.BRD4.COLO-741 240 bp overlap
ChIP COLO-741 GSE73319.BRD4.COLO-741 225 bp overlap
ChIP MCF-10A ERP003925.BRD4.MCF-10A 369 bp overlap
ChIP MCF-10A ERP003925.BRD4.MCF-10A 166 bp overlap
ChIP MDA-MB-157 ERP003925.BRD4.MDA-MB-157 338 bp overlap
ChIP cortical-interneuron_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_KCl-pos_JQ1-neg 113 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 839 bp overlap
ChIP retina_AB1-FW20 GSE86981.BRD4.retina_AB1-FW20 365 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 402 bp overlap
CBFB 1 dataset
ChIP ME-1 GSE46044.CBFB.ME-1 573 bp overlap
CBX7 2 datasets
ChIP hESC GSE133412.CBX7.hESC 210 bp overlap
ChIP hESC_TKO GSE133412.CBX7.hESC_TKO 210 bp overlap
CBX8 1 dataset
ChIP H1 ENCFF095JHA 248 bp overlap
CDK9 1 dataset
ChIP HCT-116 GSE72622.CDK9.HCT-116 232 bp overlap
CHD1 1 dataset
ChIP WA01 ENCSR000AQK.CHD1.WA01 530 bp overlap
CHD7 2 datasets
ChIP WA01 ENCSR000AVA.CHD7.WA01 137 bp overlap
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 283 bp overlap
CTBP2 2 datasets
ChIP WA01 ENCSR000EUO.CTBP2.WA01 375 bp overlap
ChIP WA01 ENCSR000EUO.CTBP2.WA01 468 bp overlap
CTCF 4 datasets
ChIP T-47D_NaCl-isotonic GSE111923.CTCF.T-47D_NaCl-isotonic 459 bp overlap
ChIP T-47D_NaCl-isotonic-triptolide GSE111923.CTCF.T-47D_NaCl-isotonic-triptolide 428 bp overlap
ChIP T-47D_NaCl-triptolide GSE111923.CTCF.T-47D_NaCl-triptolide 286 bp overlap
ChIP T-47D_triptolide GSE111923.CTCF.T-47D_triptolide 298 bp overlap
Cebpa 2 datasets
ChIP BLaER1 ENCFF031ISE 456 bp overlap
ChIP BLaER1 ENCFF274GAT 88 bp overlap
E2F6 1 dataset
ChIP WA01 ENCSR000BSI.E2F6.WA01 136 bp overlap
EED 2 datasets
ChIP ProEs GSE59087.EED.ProEs 194 bp overlap
ChIP ProEs GSE59087.EED.ProEs 364 bp overlap
EGR1 1 dataset
ChIP A-375 GSE116190.EGR1.A-375 457 bp overlap
EP300 2 datasets
ChIP neural ENCSR843ZUP.EP300.neural 201 bp overlap
ChIP neural cell ENCFF442QNK 80 bp overlap
ERG 2 datasets
ChIP CD34_NR29 GSE23730.ERG.CD34_NR29 251 bp overlap
ChIP VCaP_DHT GSE79128.ERG.VCaP_DHT 506 bp overlap
ESR1 3 datasets
ChIP Ishikawa GSE99905.ESR1.Ishikawa 238 bp overlap
ChIP Ishikawa_E2-1h GSE129803.ESR1.Ishikawa_E2-1h 224 bp overlap
ChIP MCF-7_LTED_E2 GSE86538.ESR1.MCF-7_LTED_E2 150 bp overlap
ETS1 1 dataset
ChIP cardiomyocyte_D0 GSE129986.ETS1.cardiomyocyte_D0 214 bp overlap
EZH2 48 datasets
ChIP A673 ENCFF790MVL 369 bp overlap
ChIP A673 ENCFF790MVL 637 bp overlap
ChIP A673 ENCFF955JRZ 369 bp overlap
ChIP GM23338 ENCFF613YON 190 bp overlap
ChIP GM23338 ENCFF613YON 739 bp overlap
ChIP GM23338 ENCFF886DXX 453 bp overlap
ChIP H1 ENCFF232NZA 883 bp overlap
ChIP HUVEC-C GSE109625.EZH2.HUVEC-C 883 bp overlap
ChIP HUVEC-C_VEGF_12h GSE109625.EZH2.HUVEC-C_VEGF_12h 808 bp overlap
ChIP HUVEC-C_VEGF_1h GSE109625.EZH2.HUVEC-C_VEGF_1h 847 bp overlap
ChIP HUVEC-C_VEGF_4h GSE109625.EZH2.HUVEC-C_VEGF_4h 312 bp overlap
ChIP HUVEC-C_VEGF_4h GSE109625.EZH2.HUVEC-C_VEGF_4h 508 bp overlap
ChIP LNCaP GSE39459.EZH2.LNCaP 291 bp overlap
ChIP LNCaP GSE39459.EZH2.LNCaP 244 bp overlap
ChIP RCH-ACV GSE135024.EZH2.RCH-ACV 883 bp overlap
ChIP T98G GSE112240.EZH2.T98G 173 bp overlap
ChIP T98G GSE112240.EZH2.T98G 87 bp overlap
ChIP THP-1 GSE135024.EZH2.THP-1 267 bp overlap
ChIP THP-1 GSE135024.EZH2.THP-1 97 bp overlap
ChIP VCaP_ETOH GSE28950.EZH2.VCaP_ETOH 205 bp overlap
ChIP astrocyte ENCFF365JTP 320 bp overlap
ChIP dermal-fibroblast_Preneoplastic GSE126396.EZH2.dermal-fibroblast_Preneoplastic 102 bp overlap
ChIP dermal-fibroblast_Transformed GSE126396.EZH2.dermal-fibroblast_Transformed 236 bp overlap
ChIP dermal-fibroblast_Transformed GSE126396.EZH2.dermal-fibroblast_Transformed 267 bp overlap
ChIP dermal-fibroblast_Untransformed GSE126396.EZH2.dermal-fibroblast_Untransformed 115 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 559 bp overlap
ChIP epithelial_mammary ENCSR000ARE.EZH2.epithelial_mammary 469 bp overlap
ChIP fibroblast of dermis ENCFF029VZK 635 bp overlap
ChIP fibroblast of dermis ENCFF029VZK 427 bp overlap
ChIP fibroblast of dermis ENCFF029VZK 227 bp overlap
ChIP fibroblast of lung ENCFF479BAW 466 bp overlap
ChIP fibroblast of lung ENCFF479BAW 236 bp overlap
ChIP fibroblast_LUNG ENCSR000ARO.EZH2.fibroblast_LUNG 189 bp overlap
ChIP fibroblast_LUNG ENCSR000ARO.EZH2.fibroblast_LUNG 332 bp overlap
ChIP hESC GSE113817.EZH2.hESC 621 bp overlap
ChIP hepatocyte ENCFF552DZB 883 bp overlap
ChIP keratinocyte ENCFF070STK 258 bp overlap
ChIP keratinocyte ENCFF070STK 438 bp overlap
ChIP keratinocyte ENCFF070STK 237 bp overlap
ChIP mammary epithelial cell ENCFF224GAI 291 bp overlap
ChIP myoblast_skeletal_muscle ENCSR000ARH.EZH2.myoblast_skeletal_muscle 109 bp overlap
ChIP neural ENCSR511CUH.EZH2.neural 252 bp overlap
ChIP neural progenitor cell ENCFF018MKA 883 bp overlap
ChIP neural progenitor cell ENCFF472NFV 883 bp overlap
ChIP prostate-cancer_HA GSE107780.EZH2.prostate-cancer_HA 258 bp overlap
ChIP prostate-cancer_plko GSE107780.EZH2.prostate-cancer_plko 701 bp overlap
ChIP prostate-cancer_shEZH2 GSE107780.EZH2.prostate-cancer_shEZH2 527 bp overlap
ChIP skeletal muscle myoblast ENCFF338LNF 136 bp overlap
FLI1 2 datasets
ChIP TSU-1621MT GSE60477.FLI1.TSU-1621MT 369 bp overlap
ChIP UAE_ZINC GSE23730.FLI1.UAE_ZINC 224 bp overlap
FOXA1 2 datasets
ChIP breast_tumor_Male_13 GSE104399.FOXA1.breast_tumor_Male_13 191 bp overlap
ChIP breast_tumor_Male_13 GSE104399.FOXA1.breast_tumor_Male_13 172 bp overlap
FOXO1 1 dataset
ChIP CD34 GSE80773.FOXO1.CD34 212 bp overlap
GABPA 1 dataset
ChIP WA01 ENCSR000BIW.GABPA.WA01 750 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 759 bp overlap
HCFC1R1 1 dataset
ChIP cartilage GSE100311.HCFC1R1.cartilage 298 bp overlap
HDAC2 2 datasets
ChIP WA01 ENCSR000BNR.HDAC2.WA01 102 bp overlap
ChIP WA01 ENCSR000AVB.HDAC2.WA01 427 bp overlap
HEXIM1 1 dataset
ChIP HCT-116 GSE72622.HEXIM1.HCT-116 376 bp overlap
JARID2 2 datasets
ChIP AMIPS6 GSE48516.JARID2.AMIPS6 883 bp overlap
ChIP AMIPS8 GSE48516.JARID2.AMIPS8 883 bp overlap
JUN 3 datasets
ChIP DE_D1 S40-DE-d1-JUN-exp2 294 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 477 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 433 bp overlap
KDM4A 3 datasets
ChIP WA01 ENCSR000AVC.KDM4A.WA01 684 bp overlap
ChIP hiPSC_IA12 GSE106870.KDM4A.hiPSC_IA12 273 bp overlap
ChIP hiPSC_IID12 GSE106870.KDM4A.hiPSC_IID12 193 bp overlap
KDM4C 1 dataset
ChIP SW1783 GSE92483.KDM4C.SW1783 179 bp overlap
LMO2 1 dataset
ChIP CCRF-CEM GSE33850.LMO2.CCRF-CEM 157 bp overlap
MYCN 2 datasets
ChIP NB-1643 GSE138295.MYCN.NB-1643 362 bp overlap
ChIP NB-1643 GSE138295.MYCN.NB-1643 219 bp overlap
MYOD1 1 dataset
ChIP IMR-90_GM GSE128527.MYOD1.IMR-90_GM 374 bp overlap
NANOG 3 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 883 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 319 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 168 bp overlap
NELFE 1 dataset
ChIP K-562_HS GSE112379.NELFE.K-562_HS 159 bp overlap
OGG1 4 datasets
ChIP HEK293 GSE89017.OGG1.HEK293 686 bp overlap
ChIP HEK293_15min GSE89017.OGG1.HEK293_15min 681 bp overlap
ChIP HEK293_30_min GSE89017.OGG1.HEK293_30_min 626 bp overlap
ChIP HEK293_60_min GSE89017.OGG1.HEK293_60_min 670 bp overlap
PCGF2 2 datasets
ChIP NT2-D1 GSE101538.PCGF2.NT2-D1 380 bp overlap
ChIP NT2-D1 GSE101538.PCGF2.NT2-D1 135 bp overlap
PDX1 1 dataset
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 191 bp overlap
POLR2A 1 dataset
ChIP neural cell ENCFF604SPB 89 bp overlap
POU5F1 4 datasets
ChIP BG03 GSE21614.POU5F1.BG03 190 bp overlap
ChIP DE_D1 DED1-OCT4_Batch_II 883 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 462 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 883 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 812 bp overlap
RAD21 2 datasets
ChIP hiPSC_CVI GSE106870.RAD21.hiPSC_CVI 182 bp overlap
ChIP neural ENCSR198ZYJ.RAD21.neural 278 bp overlap
RBBP5 2 datasets
ChIP WA01 ENCSR000AQC.RBBP5.WA01 195 bp overlap
ChIP WA01 ENCSR000AQC.RBBP5.WA01 306 bp overlap
RELA 2 datasets
ChIP HEK293_60_min GSE89017.RELA.HEK293_60_min 497 bp overlap
ChIP HEK293_TNF-1h GSE75562.RELA.HEK293_TNF-1h 582 bp overlap
REST 1 dataset
ChIP neural ENCSR000BTV.REST.neural 125 bp overlap
RING1 1 dataset
ChIP SYO-1_shRING1A-B GSE139053.RING1.SYO-1_shRING1A-B 206 bp overlap
RNF2 6 datasets
ChIP H1 ENCFF239FFS 259 bp overlap
ChIP H1 ENCFF239FFS 637 bp overlap
ChIP HUES-64 GSE104059.RNF2.HUES-64 320 bp overlap
ChIP HUES-64 GSE104059.RNF2.HUES-64 143 bp overlap
ChIP SYO-1_shRING1A-B GSE139053.RNF2.SYO-1_shRING1A-B 581 bp overlap
ChIP SYO-1_shRING1A-B GSE139053.RNF2.SYO-1_shRING1A-B 173 bp overlap
RORC 2 datasets
ChIP HCC70 GSE126380.RORC.HCC70 869 bp overlap
ChIP HCC70_XY018 GSE126380.RORC.HCC70_XY018 883 bp overlap
RUNX1 2 datasets
ChIP Jurkat GSE85524.RUNX1.Jurkat 245 bp overlap
ChIP epididymis_HEE GSE109061.RUNX1.epididymis_HEE 88 bp overlap
RUNX2 1 dataset
ChIP LNCaP-C4-2B GSE33889.RUNX2.LNCaP-C4-2B 360 bp overlap
RXR 1 dataset
ChIP TSU-1621MT GSE60477.RXR.TSU-1621MT 262 bp overlap
SIRT6 1 dataset
ChIP SK-MEL-239_L-C-B GSE102813.SIRT6.SK-MEL-239_L-C-B 289 bp overlap
SMAD2 1 dataset
ChIP hESC_activinA_15h GSE99202.SMAD2.hESC_activinA_15h 255 bp overlap
SMAD2-3 4 datasets
ChIP HUES-8 GSE109524.SMAD2-3.HUES-8 674 bp overlap
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 398 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 113 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 805 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 696 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 133 bp overlap
ChIP ESC S33-ESC-d0-SMAD2_3-exp2 687 bp overlap
SMARCA4 4 datasets
ChIP HS-SY-2_HA-tagged GSE108926.SMARCA4.HS-SY-2_HA-tagged 883 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 314 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 240 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 449 bp overlap
SMARCC1 4 datasets
ChIP ESC S25-ESC-d0-BAF155-exp1 403 bp overlap
ChIP SYO-1_shCt GSE139053.SMARCC1.SYO-1_shCt 704 bp overlap
ChIP SYO-1_shRING1A-B GSE139053.SMARCC1.SYO-1_shRING1A-B 244 bp overlap
ChIP SYO-1_shRING1A-B GSE139053.SMARCC1.SYO-1_shRING1A-B 403 bp overlap
SMC3 2 datasets
ChIP neural ENCSR404BPV.SMC3.neural 148 bp overlap
ChIP neural cell ENCFF795YGY 292 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 556 bp overlap
SOX2 2 datasets
ChIP HNSC GSE69479.SOX2.HNSC 348 bp overlap
ChIP RENVM GSE49404.SOX2.RENVM 157 bp overlap
SP1 1 dataset
ChIP WTC11 ENCFF688PEU 501 bp overlap
SP5 1 dataset
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
SREBP2 2 datasets
ChIP HCC70 GSE126380.SREBP2.HCC70 811 bp overlap
ChIP HCC70_XY018 GSE126380.SREBP2.HCC70_XY018 777 bp overlap
SS18 1 dataset
ChIP SYO-1_shRING1A-B GSE139053.SS18.SYO-1_shRING1A-B 515 bp overlap
SS18-SSX 1 dataset
ChIP fibroblast_W164A GSE139053.SS18-SSX.fibroblast_W164A 226 bp overlap
STAT3 1 dataset
ChIP WA01 ERP004237.STAT3.WA01 253 bp overlap
SUZ12 13 datasets
ChIP H1 ENCFF507HGF 271 bp overlap
ChIP H1 ENCFF507HGF 127 bp overlap
ChIP H1 ENCFF881NFR 883 bp overlap
ChIP HEK293T_PCGF135fl GSE119618.SUZ12.HEK293T_PCGF135fl 109 bp overlap
ChIP LNCaP GSE39459.SUZ12.LNCaP 883 bp overlap
ChIP LNCaP-abl GSE39459.SUZ12.LNCaP-abl 393 bp overlap
ChIP LNCaP-abl GSE39459.SUZ12.LNCaP-abl 278 bp overlap
ChIP NT2-D1 GSE101538.SUZ12.NT2-D1 780 bp overlap
ChIP NT2/D1 ENCFF574SXS 357 bp overlap
ChIP NT2/D1 ENCFF574SXS 149 bp overlap
ChIP NT2/D1 ENCFF574SXS 73 bp overlap
ChIP SYO-1_shCt GSE139053.SUZ12.SYO-1_shCt 269 bp overlap
ChIP WA01 ENCSR000EUQ.SUZ12.WA01 371 bp overlap
TAF1 1 dataset
ChIP neural ENCSR000BTX.TAF1.neural 80 bp overlap
TAF15 1 dataset
ChIP Hep-G2 GSE120104.TAF15.Hep-G2 248 bp overlap
TBP 2 datasets
ChIP H1 ENCFF859IIO 377 bp overlap
ChIP WA01 ENCSR000ECB.TBP.WA01 242 bp overlap
TCF12 1 dataset
ChIP WA01 ENCSR000BIT.TCF12.WA01 281 bp overlap
TFAP2A 1 dataset
Motif DE_12h DE_12h-TFAP2A_MA0810.2 11 bp overlap
TFAP2C 1 dataset
Motif DE_12h DE_12h-TFAP2C_MA0524.3 11 bp overlap
TP63 3 datasets
ChIP breast-organoid GSE113909.TP63.breast-organoid 175 bp overlap
ChIP keratinocyte GSE33571.TP63.keratinocyte 227 bp overlap
ChIP keratinocyte_diff GSE33571.TP63.keratinocyte_diff 360 bp overlap
TRIM25 1 dataset
ChIP BT-549 GSE79588.TRIM25.BT-549 463 bp overlap
TRIM28 3 datasets
ChIP AF22 GSE84259.TRIM28.AF22 433 bp overlap
ChIP AF22 GSE84259.TRIM28.AF22 254 bp overlap
ChIP hESC GSE115387.TRIM28.hESC 174 bp overlap
WDR5 1 dataset
ChIP SMMC-7721 GSE126982.WDR5.SMMC-7721 462 bp overlap
YY1 1 dataset
ChIP WA01 ENCSR000BKD.YY1.WA01 365 bp overlap
ZBTB12 1 dataset
Motif DE_12h DE_12h-ZBTB12_MA1649.2 7 bp overlap
ZBTB48 2 datasets
ChIP U2OS GSE96776.ZBTB48.U2OS 361 bp overlap
ChIP U2OS_ZBTB48-KO GSE96776.ZBTB48.U2OS_ZBTB48-KO 384 bp overlap
ZBTB7A 2 datasets
ChIP VCaP_CSS GSE123089.ZBTB7A.VCaP_CSS 321 bp overlap
ChIP VCaP_FBS GSE123089.ZBTB7A.VCaP_FBS 215 bp overlap
ZFX 1 dataset
ChIP HEK293T_FLAG GSE145160.ZFX.HEK293T_FLAG 260 bp overlap
ZNF184 1 dataset
Motif DE_12h DE_12h-ZNF184_MA2120.1 13 bp overlap
ZNF213 1 dataset
Motif DE_12h DE_12h-ZNF213_MA2121.1 12 bp overlap
ZNF263 1 dataset
Motif DE_12h DE_12h-ZNF263_MA0528.3 7 bp overlap
ZNF398 1 dataset
ChIP BG01V GSE133630.ZNF398.BG01V 159 bp overlap