chr13 : 98,574,208 98,574,669
461 bp 100 TFs 2 linked genes
This 461 bp open chromatin element is linked to STK24 and STK24-AS1 and is bound by 100 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
STK24 2.5 kb Proximal Proximity
STK24-AS1 2.6 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr13:98,569,208 – 98,579,669
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
100 transcription factors
Source
Cell type
ADNP 1 dataset
ChIP K562 ENCFF492SKF 417 bp overlap
AFF4 1 dataset
ChIP CD4_Th1_DMSO GSE62482.AFF4.CD4_Th1_DMSO 271 bp overlap
AR 2 datasets
ChIP LNCaP_DHT GSE125245.AR.LNCaP_DHT 155 bp overlap
ChIP PC-3_R1881 GSE54110.AR.PC-3_R1881 177 bp overlap
ARID1B 2 datasets
ChIP K-562 ENCSR822CCM.ARID1B.K-562 298 bp overlap
ChIP K562 ENCFF938UXQ 454 bp overlap
ARID2 2 datasets
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.ARID2.BIN-67_lentivirus-SMARCA4-K785R 351 bp overlap
ChIP Hep-G2 GSE69566.ARID2.Hep-G2 250 bp overlap
ATF2 1 dataset
ChIP GM12878 ENCSR000BQK.ATF2.GM12878 109 bp overlap
ATF7 1 dataset
ChIP GM12878 ENCSR014YCR.ATF7.GM12878 461 bp overlap
BATF 1 dataset
ChIP GM12878 ENCFF954REE 132 bp overlap
BCL11A 13 datasets
ChIP CD34_Day3_30min GSE104676.BCL11A.CD34_Day3_30min 61 bp overlap
ChIP CD34_Day5_30min GSE104676.BCL11A.CD34_Day5_30min 146 bp overlap
ChIP CD34_Day7_15min GSE104676.BCL11A.CD34_Day7_15min 122 bp overlap
ChIP CD34_Day7_30min GSE104676.BCL11A.CD34_Day7_30min 116 bp overlap
ChIP CD34_Day7_60min GSE104676.BCL11A.CD34_Day7_60min 101 bp overlap
ChIP CD34_Day7_90min GSE104676.BCL11A.CD34_Day7_90min 119 bp overlap
ChIP CD34_Day9_15min GSE104676.BCL11A.CD34_Day9_15min 102 bp overlap
ChIP CD34_Day9_30min GSE104676.BCL11A.CD34_Day9_30min 152 bp overlap
ChIP CD34_Day9_60min GSE104676.BCL11A.CD34_Day9_60min 158 bp overlap
ChIP CD34_Day9_90min GSE104676.BCL11A.CD34_Day9_90min 132 bp overlap
ChIP GM12878 ENCSR000BHA.BCL11A.GM12878 142 bp overlap
ChIP HUDEP-2_30min GSE104676.BCL11A.HUDEP-2_30min 172 bp overlap
ChIP HUDEP-2_90min GSE104676.BCL11A.HUDEP-2_90min 228 bp overlap
BCL6 1 dataset
ChIP CD4 GSE59933.BCL6.CD4 113 bp overlap
BCOR 2 datasets
ChIP K-562 ENCSR808AKZ.BCOR.K-562 255 bp overlap
ChIP K562 ENCFF343XWA 272 bp overlap
BHLHE40 5 datasets
ChIP GM12878 ENCFF521IZR 358 bp overlap
ChIP GM12878 ENCSR987MTA.BHLHE40.GM12878 181 bp overlap
ChIP GM12878 ENCSR517QHU.BHLHE40.GM12878 211 bp overlap
ChIP K-562 ENCSR000EGV.BHLHE40.K-562 158 bp overlap
ChIP K562 ENCFF923NJI 270 bp overlap
BRD4 3 datasets
ChIP CD4_Th1_BAY GSE62482.BRD4.CD4_Th1_BAY 135 bp overlap
ChIP CD4_Th1_DMSO GSE62482.BRD4.CD4_Th1_DMSO 121 bp overlap
ChIP CHL-1 GSE95585.BRD4.CHL-1 264 bp overlap
CBFA2T3 2 datasets
ChIP K-562 ENCSR697YLJ.CBFA2T3.K-562 368 bp overlap
ChIP K562 ENCFF673OEZ 184 bp overlap
CDK8 2 datasets
ChIP leiomyoma_PT1063 GSE128230.CDK8.leiomyoma_PT1063 72 bp overlap
ChIP leiomyoma_PT1063 GSE128230.CDK8.leiomyoma_PT1063 79 bp overlap
CREM 1 dataset
ChIP GM12878 ENCSR839XZU.CREM.GM12878 145 bp overlap
DPF2 1 dataset
ChIP K-562 ENCSR219BXP.DPF2.K-562 282 bp overlap
E2F6 3 datasets
ChIP K-562 ENCSR000BLI.E2F6.K-562 123 bp overlap
ChIP K-562 ENCSR000EWJ.E2F6.K-562 175 bp overlap
ChIP K562 ENCFF136LTS 277 bp overlap
EGR1 6 datasets
ChIP K-562 ENCSR211LTF.EGR1.K-562 155 bp overlap
ChIP K-562 ENCSR024CNP.EGR1.K-562 201 bp overlap
ChIP K-562 ENCSR000BNE.EGR1.K-562 128 bp overlap
ChIP K562 ENCFF006PJY 199 bp overlap
ChIP K562 ENCFF113OPQ 232 bp overlap
ChIP K562 ENCFF895KGN 262 bp overlap
EP300 2 datasets
ChIP K-562 ENCSR000EGE.EP300.K-562 127 bp overlap
ChIP K562 ENCFF226VMS 287 bp overlap
ESR1 2 datasets
ChIP T-47D_PROG GSE68355.ESR1.T-47D_PROG 183 bp overlap
ChIP T-47D_R5020 GSE68355.ESR1.T-47D_R5020 227 bp overlap
FOS 1 dataset
ChIP CD4 GSE116695.FOS.CD4 74 bp overlap
FOXP1 1 dataset
ChIP SU-DHL-6 ERP010999.FOXP1.SU-DHL-6 338 bp overlap
GATA1 7 datasets
ChIP CD34_Day7_30min GSE104676.GATA1.CD34_Day7_30min 145 bp overlap
ChIP HUDEP-2_30min GSE104676.GATA1.HUDEP-2_30min 182 bp overlap
ChIP K-562 GSE107726.GATA1.K-562 297 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 173 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 199 bp overlap
ChIP erythroblast ENCFF867JAR 461 bp overlap
ChIP erythroblast ENCSR000EXP.GATA1.erythroblast 375 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 458 bp overlap
ChIP DE DE-GATA4-2 333 bp overlap
ChIP DE DE-GATA4-2 72 bp overlap
GATA6 2 datasets
ChIP DE DE-GATA6-1 345 bp overlap
ChIP DE DE-GATA6-2 383 bp overlap
GFI1B 1 dataset
ChIP K-562 ENCSR509GDT.GFI1B.K-562 191 bp overlap
HDAC1 2 datasets
ChIP K-562 ENCSR387UWP.HDAC1.K-562 448 bp overlap
ChIP K-562 ENCSR711VWL.HDAC1.K-562 387 bp overlap
HDAC2 5 datasets
ChIP K-562 ENCSR075HTM.HDAC2.K-562 330 bp overlap
ChIP K-562 ENCSR893WSB.HDAC2.K-562 461 bp overlap
ChIP K-562 GSE140325.HDAC2.K-562 92 bp overlap
ChIP K562 ENCFF919OMP 342 bp overlap
ChIP K562 ENCFF919OMP 428 bp overlap
HDGF 2 datasets
ChIP K-562 ENCSR197ALX.HDGF.K-562 270 bp overlap
ChIP K-562 ENCSR563YDA.HDGF.K-562 333 bp overlap
IRF2 1 dataset
ChIP HepG2 ENCFF532TQV 267 bp overlap
IRF4 4 datasets
ChIP B-cell GSE142493.IRF4.B-cell 207 bp overlap
ChIP GM12878 ENCFF769ZDL 256 bp overlap
ChIP GM12878 ENCSR000BGY.IRF4.GM12878 217 bp overlap
ChIP T-cell GSE136853.IRF4.T-cell 381 bp overlap
JUN 2 datasets
ChIP Karpas-299 GSE151413.JUN.Karpas-299 383 bp overlap
ChIP T-cell GSE136853.JUN.T-cell 252 bp overlap
JUNB 4 datasets
ChIP CD4 GSE116695.JUNB.CD4 74 bp overlap
ChIP GM12878 ENCFF667EJQ 258 bp overlap
ChIP GM12878 ENCSR897MMC.JUNB.GM12878 239 bp overlap
ChIP Karpas-299 GSE151413.JUNB.Karpas-299 202 bp overlap
KDM1A 4 datasets
ChIP K-562 ENCSR908CMW.KDM1A.K-562 255 bp overlap
ChIP K-562 GSE117944.KDM1A.K-562 284 bp overlap
ChIP K562 ENCFF128TYE 319 bp overlap
ChIP K562 ENCFF133OLU 318 bp overlap
KLF4 1 dataset
ChIP BJ_INDUCED GSE36570.KLF4.BJ_INDUCED 135 bp overlap
KMT2A 1 dataset
ChIP Hep-G2 ENCSR692GFR.KMT2A.Hep-G2 308 bp overlap
L3MBTL2 3 datasets
ChIP K-562 ENCSR530XQI.L3MBTL2.K-562 370 bp overlap
ChIP K562 ENCFF320EQC 433 bp overlap
ChIP K562 ENCFF320EQC 409 bp overlap
LDB1 1 dataset
ChIP K-562 GSE142227.LDB1.K-562 154 bp overlap
MAF 2 datasets
ChIP CD4_TH2 GSE72266.MAF.CD4_TH2 198 bp overlap
ChIP CD4_Th1 GSE72266.MAF.CD4_Th1 332 bp overlap
MAX 1 dataset
ChIP K-562 ENCSR000EFV.MAX.K-562 136 bp overlap
MAZ 1 dataset
ChIP K-562 ENCSR000EFX.MAZ.K-562 153 bp overlap
MED1 1 dataset
ChIP CD4_Th1_DMSO GSE62482.MED1.CD4_Th1_DMSO 161 bp overlap
MED12 1 dataset
ChIP leiomyoma_PT886 GSE128230.MED12.leiomyoma_PT886 56 bp overlap
MEN1 1 dataset
ChIP PC-3 GSE132827.MEN1.PC-3 382 bp overlap
MITF 1 dataset
ChIP K562 ENCFF731XJJ 323 bp overlap
MLLT1 3 datasets
ChIP GM12878 ENCFF995GXC 167 bp overlap
ChIP GM12878 ENCSR552XSN.MLLT1.GM12878 461 bp overlap
ChIP K-562 ENCSR107GRP.MLLT1.K-562 205 bp overlap
MNT 2 datasets
ChIP K-562 ENCSR390VGH.MNT.K-562 314 bp overlap
ChIP K562 ENCFF820IGH 381 bp overlap
MTA2 1 dataset
ChIP K-562 ENCSR411UYA.MTA2.K-562 173 bp overlap
MYB 1 dataset
ChIP CD4_TH2 GSE72266.MYB.CD4_TH2 113 bp overlap
MYNN 2 datasets
ChIP K-562 ENCSR737LTZ.MYNN.K-562 228 bp overlap
ChIP K562 ENCFF399UNK 92 bp overlap
MYOD1 1 dataset
ChIP rhabdomyosarcoma GSE50413.MYOD1.rhabdomyosarcoma 109 bp overlap
NBN 1 dataset
ChIP GM12878 ENCSR278SQL.NBN.GM12878 285 bp overlap
NCOR1 1 dataset
ChIP K-562 ENCSR798ILC.NCOR1.K-562 258 bp overlap
NFATC2 3 datasets
ChIP CD4 GSE116695.NFATC2.CD4 235 bp overlap
ChIP CD4_CD28-ab GSE116695.NFATC2.CD4_CD28-ab 158 bp overlap
ChIP CD4_fly-DNA GSE116695.NFATC2.CD4_fly-DNA 188 bp overlap
NFIC 1 dataset
ChIP GM12878 ENCSR000BRN.NFIC.GM12878 99 bp overlap
NOTCH1 1 dataset
ChIP HPBALL GSE39263.NOTCH1.HPBALL 335 bp overlap
PAX5 1 dataset
ChIP NALM-6 GSE126300.PAX5.NALM-6 224 bp overlap
PGR 6 datasets
ChIP AB32 GSE31129.PGR.AB32 216 bp overlap
ChIP T-47D GSE31129.PGR.T-47D 229 bp overlap
ChIP T-47D_PROG GSE68355.PGR.T-47D_PROG 276 bp overlap
ChIP T-47D_R5020 GSE68355.PGR.T-47D_R5020 278 bp overlap
ChIP T-47D_R5020-MTVL GSE126859.PGR.T-47D_R5020-MTVL 250 bp overlap
ChIP T-47D_progesterone GSE132649.PGR.T-47D_progesterone 224 bp overlap
PHIP 3 datasets
ChIP HCT-116_MLL1-KO__ab833 GSE101646.PHIP.HCT-116_MLL1-KO__ab833 409 bp overlap
ChIP HCT-116_ab834 GSE101646.PHIP.HCT-116_ab834 261 bp overlap
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 376 bp overlap
PKNOX1 2 datasets
ChIP GM12878 ENCSR711XNY.PKNOX1.GM12878 147 bp overlap
ChIP K-562 ENCSR115SMW.PKNOX1.K-562 403 bp overlap
POLR2A 7 datasets
ChIP erythroblast ENCFF498VMR 318 bp overlap
ChIP erythroblast ENCFF498VMR 360 bp overlap
ChIP esophagus muscularis mucosa ENCFF759BBR 269 bp overlap
ChIP sigmoid colon ENCFF653CQA 425 bp overlap
ChIP sigmoid colon ENCFF748YVT 409 bp overlap
ChIP sigmoid colon ENCFF754JQR 331 bp overlap
ChIP transverse colon ENCFF193UMS 421 bp overlap
PRPF4 1 dataset
ChIP Hep-G2 GSE120104.PRPF4.Hep-G2 218 bp overlap
RAD51 1 dataset
ChIP GM12878 ENCSR482TWQ.RAD51.GM12878 229 bp overlap
RBFOX2 3 datasets
ChIP K-562 GSE120104.RBFOX2.K-562 383 bp overlap
ChIP K-562 ENCSR822LBD.RBFOX2.K-562 154 bp overlap
ChIP K562 ENCFF967GRF 338 bp overlap
RBPJ 1 dataset
ChIP LCL GSE75503.RBPJ.LCL 69 bp overlap
RCOR1 1 dataset
ChIP K562 ENCFF216EEJ 271 bp overlap
RELA 4 datasets
ChIP CD4_Th1_DMSO GSE62482.RELA.CD4_Th1_DMSO 213 bp overlap
ChIP GM12878 ENCSR664POU.RELA.GM12878 263 bp overlap
ChIP GM12878 ENCSR000EAG.RELA.GM12878 161 bp overlap
ChIP GM12891 ENCSR000EAI.RELA.GM12891 249 bp overlap
RELB 1 dataset
ChIP GM12878 ENCSR387QUV.RELB.GM12878 307 bp overlap
RUNX1 1 dataset
ChIP NALM-6 GSE126300.RUNX1.NALM-6 307 bp overlap
RUNX3 1 dataset
ChIP GM12878 ENCFF395WHA 247 bp overlap
SKIL 1 dataset
ChIP GM12878 ENCSR212YKD.SKIL.GM12878 273 bp overlap
SMAD1 1 dataset
ChIP GM12878 ENCSR813DCK.SMAD1.GM12878 316 bp overlap
SMARCA4 5 datasets
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4 239 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-T910M 263 bp overlap
ChIP CTV-1_DSG GSE128835.SMARCA4.CTV-1_DSG 246 bp overlap
ChIP K-562 ENCSR587OQL.SMARCA4.K-562 414 bp overlap
ChIP endometrial-epithelial-cells_KO GSE106660.SMARCA4.endometrial-epithelial-cells_KO 265 bp overlap
SREBP2 1 dataset
ChIP monocyte_TNF GSE129202.SREBP2.monocyte_TNF 193 bp overlap
SRF 5 datasets
ChIP GM12878 ENCFF878IIX 286 bp overlap
ChIP GM12878 ENCSR041XML.SRF.GM12878 209 bp overlap
ChIP K-562 ENCSR582IAO.SRF.K-562 253 bp overlap
ChIP K-562 ENCSR000BLK.SRF.K-562 122 bp overlap
ChIP K562 ENCFF766EOO 317 bp overlap
SUPT5H 1 dataset
ChIP HCT-116_pThr806 GSE138548.SUPT5H.HCT-116_pThr806 126 bp overlap
TAL1 3 datasets
ChIP K-562 GSE107726.TAL1.K-562 232 bp overlap
ChIP K-562_dCas9-KRAB GSE132212.TAL1.K-562_dCas9-KRAB 151 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.TAL1.K-562_enCRISPRi-LK 174 bp overlap
TBP 3 datasets
ChIP K-562 ENCSR000EHA.TBP.K-562 225 bp overlap
ChIP K562 ENCFF901UYM 96 bp overlap
ChIP hESC GSE122298.TBP.hESC 204 bp overlap
TBX21 2 datasets
ChIP GM12878 ENCSR739IHN.TBX21.GM12878 353 bp overlap
ChIP Th1_CD3-CD28_donor2 GSE81881.TBX21.Th1_CD3-CD28_donor2 119 bp overlap
TCF3 2 datasets
ChIP GM12878 ENCSR000BQT.TCF3.GM12878 96 bp overlap
ChIP K-562 ENCSR970OJY.TCF3.K-562 144 bp overlap
TP53 1 dataset
ChIP lymphocyte_116_Nutlin GSE110368.TP53.lymphocyte_116_Nutlin 117 bp overlap
VEZF1 2 datasets
ChIP K-562 ENCSR189YMA.VEZF1.K-562 331 bp overlap
ChIP K562 ENCFF053XDV 252 bp overlap
YY1 1 dataset
ChIP Hep-G2_NC GSE120104.YY1.Hep-G2_NC 242 bp overlap
ZBTB40 2 datasets
ChIP GM12878 ENCFF346DYM 155 bp overlap
ChIP K-562 ENCSR237VLT.ZBTB40.K-562 223 bp overlap
ZEB2 1 dataset
ChIP K-562 ENCSR004GKA.ZEB2.K-562 369 bp overlap
ZFHX2 1 dataset
ChIP HEK293 ENCFF167TUA 137 bp overlap
ZFX 1 dataset
ChIP K562 ENCFF536AJO 461 bp overlap
ZNF467 1 dataset
ChIP HEK293 GSE76494.ZNF467.HEK293 294 bp overlap
ZNF592 2 datasets
ChIP K-562 ENCSR249BHQ.ZNF592.K-562 200 bp overlap
ChIP K562 ENCFF547OSS 404 bp overlap
ZNF600 1 dataset
ChIP HEK293 ENCFF785JSX 179 bp overlap