chr11 : 12,199,620 12,199,865
245 bp 90 TFs 0 linked genes
This 245 bp open chromatin element has no linked target genes and is bound by 90 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr11:12,194,620 – 12,204,865
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
90 transcription factors
Source
Cell type
AR 1 dataset
ChIP LNCaP-abl GSE39459.AR.LNCaP-abl 117 bp overlap
ASCL1 1 dataset
ChIP NCI-H2107 GSE69394.ASCL1.NCI-H2107 77 bp overlap
BCL11A 6 datasets
ChIP CD34_Day5_30min GSE104676.BCL11A.CD34_Day5_30min 92 bp overlap
ChIP CD34_Day7_15min GSE104676.BCL11A.CD34_Day7_15min 68 bp overlap
ChIP CD34_Day7_30min GSE104676.BCL11A.CD34_Day7_30min 192 bp overlap
ChIP CD34_Day7_60min GSE104676.BCL11A.CD34_Day7_60min 123 bp overlap
ChIP CD34_Day7_90min GSE104676.BCL11A.CD34_Day7_90min 185 bp overlap
ChIP HUDEP-2_BCL11A-ER-V5 GSE103445.BCL11A.HUDEP-2_BCL11A-ER-V5 220 bp overlap
BHLHE40 3 datasets
ChIP K-562 ENCSR000EGV.BHLHE40.K-562 245 bp overlap
ChIP K562 ENCFF923NJI 217 bp overlap
ChIP K562 ENCFF923NJI 120 bp overlap
BRD3 4 datasets
ChIP K-562_DMSO-IFNG GSE138084.BRD3.K-562_DMSO-IFNG 245 bp overlap
ChIP K-562_iBET-BD1-IFNG GSE138084.BRD3.K-562_iBET-BD1-IFNG 245 bp overlap
ChIP K-562_iBET-BD2-IFNG GSE138084.BRD3.K-562_iBET-BD2-IFNG 245 bp overlap
ChIP LPS141 GSE111253.BRD3.LPS141 84 bp overlap
BRD4 12 datasets
ChIP CD4_Th1_DMSO GSE62482.BRD4.CD4_Th1_DMSO 128 bp overlap
ChIP K-562_iBET GSE138084.BRD4.K-562_iBET 208 bp overlap
ChIP K-562_iBET-BD2 GSE138084.BRD4.K-562_iBET-BD2 245 bp overlap
ChIP K-562_iBET-IFNG GSE138084.BRD4.K-562_iBET-IFNG 245 bp overlap
ChIP MM1-S GSE43743.BRD4.MM1-S 162 bp overlap
ChIP MM1-S_DMSO GSE42161.BRD4.MM1-S_DMSO 122 bp overlap
ChIP MM1-S_JQ1_50NM GSE42355.BRD4.MM1-S_JQ1_50NM 96 bp overlap
ChIP MM1-S_JQ1_5NM GSE42355.BRD4.MM1-S_JQ1_5NM 95 bp overlap
ChIP MV4-11_DMSO GSE71776.BRD4.MV4-11_DMSO 130 bp overlap
ChIP NCI-H1963 GSE145028.BRD4.NCI-H1963 203 bp overlap
ChIP NCI-H1963_shNONT GSE145028.BRD4.NCI-H1963_shNONT 245 bp overlap
ChIP SUM159PT_KO GSE131097.BRD4.SUM159PT_KO 244 bp overlap
CBFA2T2 2 datasets
ChIP K-562 ENCSR699PVC.CBFA2T2.K-562 173 bp overlap
ChIP K562 ENCFF963TXY 208 bp overlap
CBFA2T3 3 datasets
ChIP K-562 ENCSR697YLJ.CBFA2T3.K-562 245 bp overlap
ChIP K-562 GSE142227.CBFA2T3.K-562 169 bp overlap
ChIP K562 ENCFF673OEZ 141 bp overlap
CDK9 1 dataset
ChIP MM1-S_JQ1_50NM GSE49224.CDK9.MM1-S_JQ1_50NM 61 bp overlap
CDKN1B 1 dataset
ChIP MDA-MB-231 GSE112444.CDKN1B.MDA-MB-231 159 bp overlap
CEBPA 1 dataset
ChIP MV4-11 GSE88746.CEBPA.MV4-11 108 bp overlap
CREB3 1 dataset
ChIP K-562 ENCSR093FKD.CREB3.K-562 245 bp overlap
CREM 1 dataset
ChIP K-562 ENCSR077DKV.CREM.K-562 129 bp overlap
CTBP1 1 dataset
ChIP K-562 ENCSR201NQZ.CTBP1.K-562 202 bp overlap
CTCF 1 dataset
ChIP OCI-Ly3 ENCSR756ZKG.CTCF.OCI-Ly3 64 bp overlap
DPF2 2 datasets
ChIP GM12878 ENCSR509FWH.DPF2.GM12878 61 bp overlap
ChIP K-562 ENCSR219BXP.DPF2.K-562 162 bp overlap
E2F1 1 dataset
ChIP MDA-MB-231 GSE95303.E2F1.MDA-MB-231 103 bp overlap
E2F6 1 dataset
ChIP K-562 ENCSR000EWJ.E2F6.K-562 150 bp overlap
EBF1 1 dataset
ChIP GM12878 ENCFF167CZS 68 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 126 bp overlap
EP300 2 datasets
ChIP K-562 ENCSR000EGE.EP300.K-562 175 bp overlap
ChIP K562 ENCFF226VMS 233 bp overlap
ESR1 1 dataset
ChIP Ishikawa_siNTC-72h GSE129803.ESR1.Ishikawa_siNTC-72h 178 bp overlap
ETS1 7 datasets
ChIP CTV-1_DSG_SPI1-mut GSE128835.ETS1.CTV-1_DSG_SPI1-mut 133 bp overlap
ChIP HUVEC-C_12h GSE93030.ETS1.HUVEC-C_12h 104 bp overlap
ChIP HUVEC-C_4h GSE93030.ETS1.HUVEC-C_4h 107 bp overlap
ChIP HUVEC-C_VEGF_12H GSE41166.ETS1.HUVEC-C_VEGF_12H 159 bp overlap
ChIP HUVEC-C_VEGF_12h GSE109625.ETS1.HUVEC-C_VEGF_12h 104 bp overlap
ChIP HUVEC-C_VEGF_4H GSE41166.ETS1.HUVEC-C_VEGF_4H 133 bp overlap
ChIP HUVEC-C_VEGF_4h GSE109625.ETS1.HUVEC-C_VEGF_4h 107 bp overlap
FLI1 1 dataset
ChIP CTV-1_DSG_SPI1-mut GSE128835.FLI1.CTV-1_DSG_SPI1-mut 155 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 190 bp overlap
ChIP DE DE-FOXA2-2 128 bp overlap
GATA1 1 dataset
ChIP K-562 GSE107726.GATA1.K-562 188 bp overlap
GATA2 4 datasets
ChIP K-562 ENCSR000DKA.GATA2.K-562 245 bp overlap
ChIP K-562 ENCSR000EWG.GATA2.K-562 114 bp overlap
ChIP K-562 ENCSR000BKM.GATA2.K-562 82 bp overlap
ChIP SKH1 GSE87283.GATA2.SKH1 131 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 245 bp overlap
ChIP DE DE-GATA4-2 245 bp overlap
ChIP foregut GSE117136.GATA4.foregut 245 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 245 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 245 bp overlap
GATA6 14 datasets
ChIP DE DE-GATA6-1 245 bp overlap
ChIP DE DE-GATA6-2 245 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 245 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 245 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 245 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 245 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 245 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 245 bp overlap
ChIP PATU8988 GSE47535.GATA6.PATU8988 148 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 229 bp overlap
ChIP foregut GSE117136.GATA6.foregut 245 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 245 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 197 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 245 bp overlap
GATAD2A 2 datasets
ChIP K562 ENCFF071LJW 192 bp overlap
ChIP K562 ENCFF071LJW 196 bp overlap
HDAC1 1 dataset
ChIP K-562 ENCSR711VWL.HDAC1.K-562 245 bp overlap
HDAC2 1 dataset
ChIP K-562 ENCSR893WSB.HDAC2.K-562 245 bp overlap
HDAC8 1 dataset
ChIP K-562 ENCSR000DJZ.HDAC8.K-562 245 bp overlap
HDGF 1 dataset
ChIP K-562 ENCSR197ALX.HDGF.K-562 80 bp overlap
HMGB2 1 dataset
ChIP HUVEC-C GSE98245.HMGB2.HUVEC-C 116 bp overlap
ID3 1 dataset
ChIP K-562 ENCSR005NMT.ID3.K-562 179 bp overlap
JUN 3 datasets
ChIP HAEC_oxpapc_4h GSE89970.JUN.HAEC_oxpapc_4h 120 bp overlap
ChIP Karpas-299 GSE151413.JUN.Karpas-299 245 bp overlap
ChIP MDA-BoM-1833 GSE112444.JUN.MDA-BoM-1833 170 bp overlap
JUNB 1 dataset
ChIP Karpas-299 GSE151413.JUNB.Karpas-299 111 bp overlap
JUND 1 dataset
ChIP K-562 ENCSR000EGN.JUND.K-562 168 bp overlap
LDB1 1 dataset
ChIP K-562 GSE142227.LDB1.K-562 171 bp overlap
LEF1 1 dataset
ChIP K-562 ENCSR343ELW.LEF1.K-562 146 bp overlap
MAX 2 datasets
ChIP K-562 ENCSR000EFV.MAX.K-562 195 bp overlap
ChIP K562 ENCFF524IJO 245 bp overlap
MED1 3 datasets
ChIP HUVEC-C_siCTL GSE124892.MED1.HUVEC-C_siCTL 180 bp overlap
ChIP MM1-S_JQ1_500NM GSE42355.MED1.MM1-S_JQ1_500NM 55 bp overlap
ChIP MM1-S_JQ1_5NM GSE49224.MED1.MM1-S_JQ1_5NM 82 bp overlap
MEF2B 1 dataset
ChIP GM12878 ENCSR177VFS.MEF2B.GM12878 76 bp overlap
MEIS2 2 datasets
ChIP K-562 ENCSR851BNE.MEIS2.K-562 137 bp overlap
ChIP K562 ENCFF320GSD 93 bp overlap
MTA3 2 datasets
ChIP K-562 ENCSR180NCY.MTA3.K-562 245 bp overlap
ChIP K-562 ENCSR914NEI.MTA3.K-562 202 bp overlap
MYB 2 datasets
ChIP Jurkat GSE59657.MYB.Jurkat 144 bp overlap
ChIP Loucy GSE94000.MYB.Loucy 163 bp overlap
MYC 3 datasets
ChIP K-562 ENCSR000EZU.MYC.K-562 245 bp overlap
ChIP K-562 ENCSR000EGJ.MYC.K-562 182 bp overlap
ChIP K-562 ENCSR000EGS.MYC.K-562 176 bp overlap
MYCN 1 dataset
ChIP LA-N-5 GSE138295.MYCN.LA-N-5 207 bp overlap
NCOA1 1 dataset
ChIP K-562 ENCSR658WFQ.NCOA1.K-562 148 bp overlap
NCOR1 1 dataset
ChIP K-562 ENCSR798ILC.NCOR1.K-562 125 bp overlap
NR2C1 1 dataset
ChIP K562 ENCFF568JLK 245 bp overlap
NR4A1 2 datasets
ChIP K-562 ENCSR130PDE.NR4A1.K-562 245 bp overlap
ChIP K562 ENCFF998LHF 245 bp overlap
NSD2 1 dataset
ChIP K-562 ENCSR000AVE.NSD2.K-562 76 bp overlap
PDX1 1 dataset
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 126 bp overlap
PKNOX1 1 dataset
ChIP K562 ENCFF236IUS 165 bp overlap
RAD21 1 dataset
ChIP HCT-116 GSE131606.RAD21.HCT-116 144 bp overlap
RELA 2 datasets
ChIP aortic-endothelial-cell_IL1B_D49 GSE139377.RELA.aortic-endothelial-cell_IL1B_D49 118 bp overlap
ChIP aortic-endothelial-cell_IL1B_D9 GSE139377.RELA.aortic-endothelial-cell_IL1B_D9 165 bp overlap
RUNX1 2 datasets
ChIP AML_Blast GSE60130.RUNX1.AML_Blast 165 bp overlap
ChIP CD34 GSE64862.RUNX1.CD34 165 bp overlap
RUNX1T1 1 dataset
ChIP Kasumi-1_CEBPA-ER_E2 GSE102697.RUNX1T1.Kasumi-1_CEBPA-ER_E2 137 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 245 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 245 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 245 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 245 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 200 bp overlap
SMARCA4 6 datasets
ChIP CTV-1_DSG_SPI1-mut GSE128835.SMARCA4.CTV-1_DSG_SPI1-mut 182 bp overlap
ChIP CTV-1_FLAG_SPI1-mut GSE128835.SMARCA4.CTV-1_FLAG_SPI1-mut 245 bp overlap
ChIP CTV-1_delA GSE128835.SMARCA4.CTV-1_delA 245 bp overlap
ChIP J-Lat_GFP-Clone-A72_DMSO GSE100266.SMARCA4.J-Lat_GFP-Clone-A72_DMSO 245 bp overlap
ChIP J-Lat_GFP-Clone-A72_JQ1 GSE100266.SMARCA4.J-Lat_GFP-Clone-A72_JQ1 150 bp overlap
ChIP K-562 ENCSR587OQL.SMARCA4.K-562 127 bp overlap
SMC1 2 datasets
ChIP DKO GSE131606.SMC1.DKO 184 bp overlap
ChIP HCAEC GSE101921.SMC1.HCAEC 134 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 184 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 245 bp overlap
SOX6 1 dataset
ChIP K-562 ENCSR788RSW.SOX6.K-562 245 bp overlap
SS18 1 dataset
ChIP SYO-1 GSE108025.SS18.SYO-1 245 bp overlap
T 1 dataset
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 168 bp overlap
TAL1 3 datasets
ChIP K-562 ENCSR000EHB.TAL1.K-562 189 bp overlap
ChIP K-562 GSE107726.TAL1.K-562 124 bp overlap
ChIP K562 ENCFF661CCK 154 bp overlap
TBX5 3 datasets
ChIP G296S GSE85628.TBX5.G296S 122 bp overlap
ChIP G296S_2 GSE85628.TBX5.G296S_2 122 bp overlap
ChIP cardiomyocyte_7 GSE85628.TBX5.cardiomyocyte_7 55 bp overlap
TCF12 2 datasets
ChIP K-562 ENCSR744WOO.TCF12.K-562 157 bp overlap
ChIP K562 ENCFF931DJY 199 bp overlap
TCF3 2 datasets
ChIP K-562 ENCSR970OJY.TCF3.K-562 186 bp overlap
ChIP RCH-ACV GSE85988.TCF3.RCH-ACV 122 bp overlap
TEAD4 1 dataset
ChIP K562 ENCFF673NIK 192 bp overlap
TFAP4 1 dataset
ChIP K562 ENCFF727PXG 245 bp overlap
USF1 1 dataset
ChIP K-562 ENCSR000BKT.USF1.K-562 135 bp overlap
XRCC5 1 dataset
ChIP K562 ENCFF828QYP 147 bp overlap
ZEB2 1 dataset
ChIP K-562 ENCSR322CFO.ZEB2.K-562 112 bp overlap
ZNF148 1 dataset
ChIP K-562 GSE121133.ZNF148.K-562 193 bp overlap
ZNF281 1 dataset
ChIP K562 ENCFF594VNM 150 bp overlap
ZNF584 1 dataset
ChIP K562 ENCFF771INO 157 bp overlap
ZNF644 1 dataset
ChIP K562 ENCFF290PDB 245 bp overlap