chr10 : 93,849,554 93,849,958
404 bp 106 TFs 0 linked genes
This 404 bp open chromatin element has no linked target genes and is bound by 106 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr10:93,844,554 – 93,854,958
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
106 transcription factors
Source
Cell type
ARID1A 1 dataset
ChIP HAP1 GSE108387.ARID1A.HAP1 330 bp overlap
Arid3b 1 dataset
Motif DE_12h DE_12h-Arid3b_MA0601.2 7 bp overlap
BCOR 4 datasets
ChIP WA01 GSE104690.BCOR.WA01 285 bp overlap
ChIP WA01_KDM2B_KO GSE104690.BCOR.WA01_KDM2B_KO 404 bp overlap
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 134 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 194 bp overlap
BRD4 1 dataset
ChIP cortical-interneuron_R133C_KCl-neg_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-neg_JQ1-neg 404 bp overlap
CHD7 1 dataset
ChIP H1 ENCFF126NLU 68 bp overlap
CREB1 2 datasets
ChIP GM23338 ENCFF432ZEW 270 bp overlap
ChIP GM23338 ENCSR214ZAV.CREB1.GM23338 219 bp overlap
CTCF 1 dataset
ChIP HAP1_2kb GSE152721.CTCF.HAP1_2kb 126 bp overlap
CTNNB1 3 datasets
ChIP hESC_YAP-_activinA_15h GSE99202.CTNNB1.hESC_YAP-_activinA_15h 271 bp overlap
ChIP hESC_activinA_15h GSE99202.CTNNB1.hESC_activinA_15h 301 bp overlap
ChIP hiPSC_D2 GSE132532.CTNNB1.hiPSC_D2 170 bp overlap
EGR1 1 dataset
Motif DE_12h DE_12h-EGR1_MA0162.5 10 bp overlap
ELF1 1 dataset
ChIP SK-N-MC_SHGFP_96H GSE61944.ELF1.SK-N-MC_SHGFP_96H 96 bp overlap
ETS1 2 datasets
ChIP GM23338 ENCFF701IZH 310 bp overlap
ChIP hESC ENCSR534VHI.ETS1.hESC 280 bp overlap
ETV1 1 dataset
ChIP GIST GSE22441.ETV1.GIST 190 bp overlap
ETV2::DRGX 2 datasets
Motif DE_12h DE_12h-ETV2DRGX_MA1940.2 12 bp overlap
Motif ES_0h ES_0h-ETV2DRGX_MA1940.2 12 bp overlap
ETV5::DRGX 2 datasets
Motif DE_12h DE_12h-ETV5DRGX_MA1944.2 12 bp overlap
Motif ES_0h ES_0h-ETV5DRGX_MA1944.2 12 bp overlap
EWSR1-FLI1 2 datasets
Motif DE_12h DE_12h-EWSR1-FLI1_MA0149.1 18 bp overlap
Motif ES_0h ES_0h-EWSR1-FLI1_MA0149.1 18 bp overlap
Elf5 2 datasets
Motif DE_12h DE_12h-Elf5_MA0136.4 8 bp overlap
Motif ES_0h ES_0h-Elf5_MA0136.4 8 bp overlap
FLI1 5 datasets
ChIP A-673 GSE99959.FLI1.A-673 223 bp overlap
ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 404 bp overlap
ChIP A-673_2_KRAB_eSOX2_1 GSE106914.FLI1.A-673_2_KRAB_eSOX2_1 401 bp overlap
ChIP A-673_D14 GSE129155.FLI1.A-673_D14 393 bp overlap
ChIP A-673_D17 GSE129155.FLI1.A-673_D17 404 bp overlap
FLI1::DRGX 2 datasets
Motif DE_12h DE_12h-FLI1DRGX_MA1949.2 14 bp overlap
Motif ES_0h ES_0h-FLI1DRGX_MA1949.2 14 bp overlap
FOXD3 1 dataset
Motif ES_0h ES_0h-FOXD3_MA0041.3 14 bp overlap
FOXP1 1 dataset
ChIP H9 GSE31006.FOXP1.H9 261 bp overlap
FOXP2 1 dataset
Motif ES_0h ES_0h-FOXP2_MA0593.2 9 bp overlap
FOXP4 1 dataset
ChIP WTC11 ENCFF708TAF 359 bp overlap
GATA3 2 datasets
ChIP Kelly GSE94822.GATA3.Kelly 211 bp overlap
ChIP Kelly GSE65664.GATA3.Kelly 167 bp overlap
GATA6 3 datasets
ChIP DE_D1 S09-DE-d1-GATA6-exp1 202 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 282 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 341 bp overlap
HAND2 2 datasets
ChIP Kelly GSE94822.HAND2.Kelly 297 bp overlap
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 366 bp overlap
HOXC6 1 dataset
ChIP 22Rv1 GSE129951.HOXC6.22Rv1 56 bp overlap
Hnf1A 1 dataset
Motif DE_12h DE_12h-Hnf1A_MA1991.2 10 bp overlap
IKZF2 2 datasets
Motif DE_12h DE_12h-IKZF2_MA2326.1 6 bp overlap
Motif ES_0h ES_0h-IKZF2_MA2326.1 6 bp overlap
ISL1 1 dataset
ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 346 bp overlap
JUN 4 datasets
ChIP DE_D2 S02-DE-d2-JUN-exp1 269 bp overlap
ChIP ESC S34-ESC-d0-JUN-exp2 302 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 310 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 331 bp overlap
KLF17 1 dataset
Motif DE_12h DE_12h-KLF17_MA1514.2 14 bp overlap
KLF4 2 datasets
ChIP WA09 GSE105028.KLF4.WA09 332 bp overlap
ChIP WA09_heat-shock GSE105028.KLF4.WA09_heat-shock 228 bp overlap
LEF1 1 dataset
ChIP hESC_WNT3A GSE64758.LEF1.hESC_WNT3A 363 bp overlap
Lef1 1 dataset
Motif DE_12h DE_12h-Lef1_MA0768.3 8 bp overlap
Lhx3 1 dataset
Motif DE_12h DE_12h-Lhx3_MA0135.2 12 bp overlap
MED1 1 dataset
ChIP hESC_PRIMED GSE69646.MED1.hESC_PRIMED 299 bp overlap
MEIS2 1 dataset
Motif ES_0h ES_0h-MEIS2_MA1640.2 9 bp overlap
MORC2 1 dataset
ChIP H9 GSE95374.MORC2.H9 259 bp overlap
MRTFB 1 dataset
ChIP A-673-clone-Asp114 GSE92738.MRTFB.A-673-clone-Asp114 114 bp overlap
MYBL2 1 dataset
ChIP A-673 GSE119971.MYBL2.A-673 404 bp overlap
MYCN 1 dataset
ChIP Kelly GSE94822.MYCN.Kelly 111 bp overlap
NANOG 11 datasets
ChIP GM23338 ENCFF065NZG 208 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 404 bp overlap
ChIP H1 ENCFF747ZPQ 192 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 404 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 404 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 404 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 404 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 404 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 404 bp overlap
ChIP hESC GSE20650.NANOG.hESC 389 bp overlap
ChIP hESC GSE18292.NANOG.hESC 264 bp overlap
NIPBL 6 datasets
ChIP WA09 GSE105028.NIPBL.WA09 404 bp overlap
ChIP WA09_heat-shock GSE105028.NIPBL.WA09_heat-shock 404 bp overlap
ChIP hESC GSE64758.NIPBL.hESC 241 bp overlap
ChIP hESC_WNT3A GSE64758.NIPBL.hESC_WNT3A 404 bp overlap
ChIP hESC_WNT3A_ACTIVIN GSE64758.NIPBL.hESC_WNT3A_ACTIVIN 404 bp overlap
ChIP hESC_activin GSE64758.NIPBL.hESC_activin 404 bp overlap
NKX3-1 1 dataset
ChIP islet ERP004003.NKX3-1.islet 110 bp overlap
PAX3 1 dataset
Motif ES_0h ES_0h-PAX3_MA0780.1 10 bp overlap
PBX2 1 dataset
Motif ES_0h ES_0h-PBX2_MA1113.3 9 bp overlap
PCGF1 1 dataset
ChIP WA01 GSE104690.PCGF1.WA01 155 bp overlap
PGR 2 datasets
ChIP T-47D_R5020 GSE68355.PGR.T-47D_R5020 169 bp overlap
ChIP T-47D_R5020-MTVL GSE126859.PGR.T-47D_R5020-MTVL 148 bp overlap
PHOX2A 1 dataset
Motif ES_0h ES_0h-PHOX2A_MA0713.1 11 bp overlap
PHOX2B 1 dataset
Motif ES_0h ES_0h-PHOX2B_MA0681.3 12 bp overlap
POLR2A 1 dataset
ChIP SK-N-MC ENCFF088IVG 312 bp overlap
POU3F1 1 dataset
ChIP SKM-1_D2 GSE93706.POU3F1.SKM-1_D2 404 bp overlap
POU3F2 1 dataset
ChIP hiPSC GSE149017.POU3F2.hiPSC 199 bp overlap
POU4F1 1 dataset
Motif DE_12h DE_12h-POU4F1_MA0790.2 12 bp overlap
POU4F3 1 dataset
Motif DE_12h DE_12h-POU4F3_MA0791.2 12 bp overlap
POU5F1 12 datasets
ChIP GM23338 ENCFF333SNB 270 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 404 bp overlap
ChIP NCCIT GSE36134.POU5F1.NCCIT 357 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 404 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 235 bp overlap
ChIP WA09 GSE105028.POU5F1.WA09 404 bp overlap
ChIP WA09_heat-shock GSE105028.POU5F1.WA09_heat-shock 404 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 390 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 404 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 404 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 304 bp overlap
ChIP hiPSC_3s2 GSE81899.POU5F1.hiPSC_3s2 325 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 351 bp overlap
PRDM14 2 datasets
ChIP hESC GSE22767.PRDM14.hESC 319 bp overlap
ChIP primordial-germ-cell-like-cell GSE138674.PRDM14.primordial-germ-cell-like-cell 264 bp overlap
PROP1 1 dataset
Motif ES_0h ES_0h-PROP1_MA0715.1 11 bp overlap
Pax7 1 dataset
Motif ES_0h ES_0h-Pax7_MA0680.3 10 bp overlap
Pgr 1 dataset
Motif ES_0h ES_0h-Pgr_MA2323.1 17 bp overlap
RAD21 2 datasets
ChIP HAP1 GSE126634.RAD21.HAP1 317 bp overlap
ChIP HAP1 GSE152721.RAD21.HAP1 153 bp overlap
RARA 1 dataset
ChIP hiPSC_D2 GSE132532.RARA.hiPSC_D2 188 bp overlap
RBPJ 1 dataset
Motif DE_12h DE_12h-RBPJ_MA1116.2 6 bp overlap
REST 1 dataset
ChIP neural ENCSR000BTV.REST.neural 198 bp overlap
RNF2 3 datasets
ChIP WA01 GSE104690.RNF2.WA01 401 bp overlap
ChIP WA09 GSE105028.RNF2.WA09 404 bp overlap
ChIP WA09_heat-shock GSE105028.RNF2.WA09_heat-shock 404 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 404 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 404 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 404 bp overlap
SMAD2_3 2 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 379 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 370 bp overlap
SMAD3 1 dataset
ChIP BG03 GSE21614.SMAD3.BG03 298 bp overlap
SMARCA4 3 datasets
ChIP WA09_heat-shock GSE105028.SMARCA4.WA09_heat-shock 87 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 404 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 385 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 404 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 404 bp overlap
SMARCC1 4 datasets
ChIP DE_D1 S10-DE-d1-BAF155-exp1 117 bp overlap
ChIP SK-N-MC GSE94275.SMARCC1.SK-N-MC 262 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 404 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 399 bp overlap
SOX10 1 dataset
Motif ES_0h ES_0h-SOX10_MA0442.3 6 bp overlap
SOX2 4 datasets
ChIP HNSC GSE69479.SOX2.HNSC 220 bp overlap
ChIP hESC GSE18292.SOX2.hESC 95 bp overlap
ChIP hESC GSE69479.SOX2.hESC 209 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 344 bp overlap
Stat2 1 dataset
Motif DE_12h DE_12h-Stat2_MA1623.2 10 bp overlap
Stat5b 1 dataset
Motif DE_12h DE_12h-Stat5b_MA1625.2 9 bp overlap
TBX2 2 datasets
ChIP Kelly GSE94822.TBX2.Kelly 141 bp overlap
ChIP SK-N-BE2-C GSE94822.TBX2.SK-N-BE2-C 83 bp overlap
TCF12 1 dataset
ChIP WA01 ENCSR000BIT.TCF12.WA01 113 bp overlap
TCF3 1 dataset
ChIP NPC GSE154479.TCF3.NPC 238 bp overlap
TCF7 1 dataset
Motif DE_12h DE_12h-TCF7_MA0769.3 7 bp overlap
TCF7L2 1 dataset
Motif DE_12h DE_12h-TCF7L2_MA0523.2 9 bp overlap
TFAP2A 5 datasets
Motif DE_12h DE_12h-TFAP2A_MA0003.5 9 bp overlap
Motif DE_12h DE_12h-TFAP2A_MA0810.2 11 bp overlap
Motif ES_0h ES_0h-TFAP2A_MA0003.5 9 bp overlap
Motif ES_0h ES_0h-TFAP2A_MA0810.2 11 bp overlap
ChIP WA09 GSE105081.TFAP2A.WA09 158 bp overlap
TFAP2B 5 datasets
Motif DE_12h DE_12h-TFAP2B_MA0811.2 11 bp overlap
Motif DE_12h DE_12h-TFAP2B_MA0812.2 9 bp overlap
Motif ES_0h ES_0h-TFAP2B_MA0811.2 11 bp overlap
Motif ES_0h ES_0h-TFAP2B_MA0812.2 9 bp overlap
ChIP SK-N-SH ENCFF869XXQ 241 bp overlap
TFAP2C 6 datasets
Motif DE_12h DE_12h-TFAP2C_MA0524.3 11 bp overlap
Motif DE_12h DE_12h-TFAP2C_MA0814.3 9 bp overlap
Motif ES_0h ES_0h-TFAP2C_MA0524.3 11 bp overlap
Motif ES_0h ES_0h-TFAP2C_MA0814.3 9 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 404 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 404 bp overlap
TFAP2E 2 datasets
Motif DE_12h DE_12h-TFAP2E_MA1569.2 9 bp overlap
Motif ES_0h ES_0h-TFAP2E_MA1569.2 9 bp overlap
TP53 1 dataset
ChIP H9_ectoderm GSE142050.TP53.H9_ectoderm 335 bp overlap
TRIM28 1 dataset
ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 394 bp overlap
ZBTB17 1 dataset
Motif ES_0h ES_0h-ZBTB17_MA2102.1 8 bp overlap
ZMAT4 1 dataset
ChIP WTC11 ENCFF608UXZ 207 bp overlap
ZNF184 3 datasets
Motif DE_12h DE_12h-ZNF184_MA2120.1 13 bp overlap
Motif DE_12h DE_12h-ZNF184_MA2120.1 13 bp overlap
Motif ES_0h ES_0h-ZNF184_MA2120.1 13 bp overlap
ZNF274 1 dataset
Motif ES_0h ES_0h-ZNF274_MA1592.2 12 bp overlap
ZNF354A 2 datasets
Motif ES_0h ES_0h-ZNF354A_MA1978.2 20 bp overlap
Motif ES_0h ES_0h-ZNF354A_MA1978.2 20 bp overlap
ZNF384 1 dataset
Motif ES_0h ES_0h-ZNF384_MA1125.2 8 bp overlap
ZNF418 1 dataset
Motif ES_0h ES_0h-ZNF418_MA1980.1 15 bp overlap
ZNF558 1 dataset
Motif ES_0h ES_0h-ZNF558_MA2335.1 29 bp overlap
ZNF682 2 datasets
Motif DE_12h DE_12h-ZNF682_MA1599.2 11 bp overlap
Motif ES_0h ES_0h-ZNF682_MA1599.2 11 bp overlap
ZNF692 2 datasets
Motif DE_12h DE_12h-ZNF692_MA1986.2 8 bp overlap
Motif ES_0h ES_0h-ZNF692_MA1986.2 8 bp overlap
ZNF76 1 dataset
Motif ES_0h ES_0h-ZNF76_MA1716.2 17 bp overlap
ZNF766 1 dataset
Motif DE_12h DE_12h-ZNF766_MA2098.1 9 bp overlap
Zfp335 2 datasets
Motif DE_12h DE_12h-Zfp335_MA2002.2 7 bp overlap
Motif ES_0h ES_0h-Zfp335_MA2002.2 7 bp overlap