chr10 : 93,841,872 93,842,361
489 bp 102 TFs 3 linked genes
This 489 bp open chromatin element is linked to SLC35G1, FRA10AC1, and PLCE1 and is bound by 102 transcription factors.
Linked Genes
3 genes
Gene Expression Dist. to TSS Distance Link type
SLC35G1 51.9 kb Distal Multiome
FRA10AC1 139.5 kb Distal Multiome
PLCE1 151.8 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr10:93,836,872 – 93,847,361
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
102 transcription factors
Source
Cell type
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 357 bp overlap
ATF2 2 datasets
ChIP H1 ENCFF295GZO 489 bp overlap
ChIP WA01 ENCSR000BQU.ATF2.WA01 325 bp overlap
BCL11A 4 datasets
ChIP H1 ENCFF833IPY 145 bp overlap
ChIP H1 ENCFF836SSR 177 bp overlap
ChIP WA01 ENCSR000BMJ.BCL11A.WA01 198 bp overlap
ChIP WA01 ENCSR000BIP.BCL11A.WA01 165 bp overlap
BCOR 3 datasets
ChIP WA01 GSE104690.BCOR.WA01 444 bp overlap
ChIP WA01_KDM2B_KO GSE104690.BCOR.WA01_KDM2B_KO 443 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 351 bp overlap
CHD2 1 dataset
ChIP H1 ENCFF991MKH 270 bp overlap
CREB1 3 datasets
ChIP GM23338 ENCFF432ZEW 305 bp overlap
ChIP GM23338 ENCSR214ZAV.CREB1.GM23338 228 bp overlap
ChIP WA01 ENCSR000BSN.CREB1.WA01 164 bp overlap
CTCF 1 dataset
ChIP anterior-temporal-cortex_adult GSE116825.CTCF.anterior-temporal-cortex_adult 178 bp overlap
EBF1 1 dataset
Motif DE_12h DE_12h-EBF1_MA0154.5 11 bp overlap
EGR1 2 datasets
ChIP H1 ENCFF451BLH 261 bp overlap
ChIP WA01 ENCSR000BJA.EGR1.WA01 171 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 193 bp overlap
EP300 3 datasets
ChIP H1 ENCFF927IYK 297 bp overlap
ChIP WA01 ENCSR000BKK.EP300.WA01 323 bp overlap
ChIP WA01 ENCSR000AUQ.EP300.WA01 207 bp overlap
ESR1 2 datasets
ChIP Ishikawa_DMSO_D538G_clone3 GSE132426.ESR1.Ishikawa_DMSO_D538G_clone3 105 bp overlap
ChIP MCF-7_E2 GSE14664.ESR1.MCF-7_E2 94 bp overlap
ETS1 2 datasets
ChIP GM23338 ENCFF701IZH 377 bp overlap
ChIP hESC ENCSR534VHI.ETS1.hESC 237 bp overlap
ETV6 2 datasets
ChIP WTC11 ENCFF812SCD 393 bp overlap
ChIP WTC11 ENCFF812SCD 186 bp overlap
Ebf4 1 dataset
Motif DE_12h DE_12h-Ebf4_MA2122.1 11 bp overlap
FOXA2 1 dataset
ChIP DE DE-FOXA2-1 269 bp overlap
FOXP1 1 dataset
ChIP H9 GSE31006.FOXP1.H9 279 bp overlap
FOXP4 1 dataset
ChIP WTC11 ENCFF708TAF 377 bp overlap
GATA4 1 dataset
ChIP DE DE-GATA4-1 273 bp overlap
GATA6 6 datasets
ChIP DE DE-GATA6-1 310 bp overlap
ChIP DE DE-GATA6-2 427 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 378 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 353 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 457 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 306 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 489 bp overlap
HDAC2 2 datasets
ChIP WA01 ENCSR000AVB.HDAC2.WA01 271 bp overlap
ChIP WA01 ENCSR000BNR.HDAC2.WA01 230 bp overlap
HDAC6 2 datasets
ChIP H1 ENCFF799IKG 151 bp overlap
ChIP WA01 ENCSR000ATQ.HDAC6.WA01 269 bp overlap
HIF1A 1 dataset
ChIP U2OS_DMOG GSE85096.HIF1A.U2OS_DMOG 175 bp overlap
HNF4A 1 dataset
Motif DE_12h DE_12h-HNF4A_MA0114.5 9 bp overlap
HNF4G 1 dataset
Motif DE_12h DE_12h-HNF4G_MA0484.3 9 bp overlap
Hnf1A 1 dataset
Motif DE_12h DE_12h-Hnf1A_MA1991.2 10 bp overlap
JARID2 2 datasets
ChIP MRC-5_IPS25_CTR GSE48515.JARID2.MRC-5_IPS25_CTR 324 bp overlap
ChIP UTEIPS6 GSE48516.JARID2.UTEIPS6 288 bp overlap
JUN 6 datasets
ChIP DE_D1 S40-DE-d1-JUN-exp2 313 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 388 bp overlap
ChIP DE_D2 S54-DE-d2-JUN-exp2 275 bp overlap
ChIP ESC S34-ESC-d0-JUN-exp2 461 bp overlap
ChIP H1 ENCFF621PNP 241 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 468 bp overlap
JUND 2 datasets
ChIP H1 ENCFF468JZD 231 bp overlap
ChIP WA01 ENCSR000BKP.JUND.WA01 269 bp overlap
KDM1A 1 dataset
ChIP H1 ENCFF696SGD 381 bp overlap
KLF4 2 datasets
ChIP WA09 GSE105028.KLF4.WA09 191 bp overlap
ChIP hiPSC GSE56567.KLF4.hiPSC 170 bp overlap
Lef1 1 dataset
Motif DE_12h DE_12h-Lef1_MA0768.3 8 bp overlap
MED26 1 dataset
ChIP U2OS_SHCTR GSE73742.MED26.U2OS_SHCTR 417 bp overlap
MORC2 1 dataset
ChIP HeLa_V5-MORC2-KO GSE95451.MORC2.HeLa_V5-MORC2-KO 216 bp overlap
MYC 1 dataset
ChIP CD34 GSE85488.MYC.CD34 123 bp overlap
MYOG 1 dataset
ChIP RH30_DMSO GSE85169.MYOG.RH30_DMSO 200 bp overlap
NANOG 11 datasets
ChIP GM23338 ENCFF065NZG 311 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 147 bp overlap
ChIP H1 ENCFF747ZPQ 241 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 489 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 430 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 278 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 489 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 361 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 307 bp overlap
ChIP hESC GSE18292.NANOG.hESC 120 bp overlap
ChIP hESC GSE20650.NANOG.hESC 278 bp overlap
NIPBL 4 datasets
ChIP WA09 GSE105028.NIPBL.WA09 326 bp overlap
ChIP WA09_heat-shock GSE105028.NIPBL.WA09_heat-shock 404 bp overlap
ChIP hESC GSE64758.NIPBL.hESC 188 bp overlap
ChIP hESC_WNT3A_ACTIVIN GSE64758.NIPBL.hESC_WNT3A_ACTIVIN 334 bp overlap
NR3C1 1 dataset
ChIP A-549 ENCSR000BHF.NR3C1.A-549 220 bp overlap
OTX2 1 dataset
ChIP WTC11 ENCFF634NAO 245 bp overlap
PAX5 1 dataset
ChIP fetal_testis GSE100639.PAX5.fetal_testis 274 bp overlap
PCGF1 1 dataset
ChIP WA01 GSE104690.PCGF1.WA01 235 bp overlap
POLR2A 2 datasets
ChIP GM23338 ENCFF450WCS 361 bp overlap
ChIP H1 ENCFF833NJP 383 bp overlap
POU1F1 1 dataset
Motif DE_12h DE_12h-POU1F1_MA0784.3 14 bp overlap
POU2F1 1 dataset
Motif DE_12h DE_12h-POU2F1_MA0785.2 9 bp overlap
POU2F2 1 dataset
Motif DE_12h DE_12h-POU2F2_MA0507.3 13 bp overlap
POU2F3 1 dataset
Motif DE_12h DE_12h-POU2F3_MA0627.3 9 bp overlap
POU3F1 1 dataset
Motif DE_12h DE_12h-POU3F1_MA0786.2 10 bp overlap
POU3F2 1 dataset
Motif DE_12h DE_12h-POU3F2_MA0787.1 12 bp overlap
POU3F4 1 dataset
Motif DE_12h DE_12h-POU3F4_MA0789.1 9 bp overlap
POU5F1 19 datasets
ChIP BG03 GSE21614.POU5F1.BG03 178 bp overlap
Motif DE_12h DE_12h-POU5F1_MA1115.2 7 bp overlap
ChIP DE_D1 DED1-OCT4_Batch_II 380 bp overlap
ChIP GM23338 ENCFF333SNB 311 bp overlap
ChIP H1 ENCFF698ZAP 205 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 489 bp overlap
ChIP NCCIT GSE36134.POU5F1.NCCIT 392 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 489 bp overlap
ChIP SKM-1 GSE93706.POU5F1.SKM-1 186 bp overlap
ChIP WA01 ENCSR000BMU.POU5F1.WA01 289 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 275 bp overlap
ChIP WA09 GSE105028.POU5F1.WA09 316 bp overlap
ChIP WA09_heat-shock GSE105028.POU5F1.WA09_heat-shock 333 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 271 bp overlap
ChIP hESC GSE20650.POU5F1.hESC 159 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 406 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 489 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 348 bp overlap
ChIP hiPSC_3s2 GSE81899.POU5F1.hiPSC_3s2 421 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 427 bp overlap
PRDM1 1 dataset
ChIP fetal_testis GSE100639.PRDM1.fetal_testis 271 bp overlap
PRDM14 4 datasets
ChIP NCCIT GSE71675.PRDM14.NCCIT 463 bp overlap
ChIP hESC GSE138674.PRDM14.hESC 489 bp overlap
ChIP hESC GSE22767.PRDM14.hESC 489 bp overlap
ChIP primordial-germ-cell-like-cell GSE138674.PRDM14.primordial-germ-cell-like-cell 368 bp overlap
RAD21 1 dataset
ChIP H1 ENCFF698EWO 241 bp overlap
RARA 1 dataset
ChIP hiPSC_D2 GSE132532.RARA.hiPSC_D2 227 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 149 bp overlap
RNF2 4 datasets
ChIP WA01 GSE104690.RNF2.WA01 362 bp overlap
ChIP WA01 ENCSR784VUY.RNF2.WA01 286 bp overlap
ChIP WA09 GSE105028.RNF2.WA09 489 bp overlap
ChIP WA09_heat-shock GSE105028.RNF2.WA09_heat-shock 474 bp overlap
RREB1 1 dataset
Motif DE_12h DE_12h-RREB1_MA0073.2 19 bp overlap
RXRA 2 datasets
ChIP H1 ENCFF570NHK 201 bp overlap
ChIP WA01 ENCSR000BJW.RXRA.WA01 231 bp overlap
RYBP 1 dataset
ChIP WA01 GSE104690.RYBP.WA01 394 bp overlap
SALL2 1 dataset
ChIP HEK293 GSE145940.SALL2.HEK293 280 bp overlap
SIN3A 2 datasets
ChIP H1 ENCFF896IJG 301 bp overlap
ChIP WA01 ENCSR000BIS.SIN3A.WA01 237 bp overlap
SMAD2 1 dataset
ChIP hESC_YAP-_activinA_15h GSE99202.SMAD2.hESC_YAP-_activinA_15h 295 bp overlap
SMAD2-3 4 datasets
ChIP HUES-8 GSE109524.SMAD2-3.HUES-8 413 bp overlap
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 348 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 394 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 329 bp overlap
SMAD2_3 4 datasets
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 306 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 306 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 227 bp overlap
ChIP ESC S33-ESC-d0-SMAD2_3-exp2 369 bp overlap
SMAD3 2 datasets
ChIP BG03 GSE21614.SMAD3.BG03 172 bp overlap
ChIP BG03_DIFF_2H GSE36578.SMAD3.BG03_DIFF_2H 269 bp overlap
SMARCA4 2 datasets
ChIP hiPSC GSE124903.SMARCA4.hiPSC 434 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 390 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 412 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 296 bp overlap
SMARCC1 2 datasets
ChIP hiPSC GSE124903.SMARCC1.hiPSC 361 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 315 bp overlap
SNAI2 1 dataset
ChIP SMS-CTR_shSNAI2 GSE137168.SNAI2.SMS-CTR_shSNAI2 137 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 231 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 451 bp overlap
SOX2 6 datasets
ChIP H9 GSE46837.SOX2.H9 465 bp overlap
ChIP HNSC GSE69479.SOX2.HNSC 188 bp overlap
ChIP hESC GSE69479.SOX2.hESC 329 bp overlap
ChIP hESC GSE18292.SOX2.hESC 121 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 422 bp overlap
ChIP hiPSC_3s2 GSE81899.SOX2.hiPSC_3s2 435 bp overlap
SOX21 1 dataset
ChIP neuroepithelilal-cells GSE110505.SOX21.neuroepithelilal-cells 282 bp overlap
SP1 2 datasets
ChIP H1 ENCFF263FUH 321 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 278 bp overlap
SP4 1 dataset
ChIP WA01 ENCSR000BQV.SP4.WA01 230 bp overlap
SUZ12 1 dataset
ChIP NT2-D1 ENCSR000EXH.SUZ12.NT2-D1 295 bp overlap
T 2 datasets
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 228 bp overlap
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 183 bp overlap
TBP 1 dataset
ChIP hiPSC_WTa_RNase-neg GSE128135.TBP.hiPSC_WTa_RNase-neg 293 bp overlap
TCF12 2 datasets
ChIP H1 ENCFF203EBH 263 bp overlap
ChIP WA01 ENCSR000BIT.TCF12.WA01 425 bp overlap
TCF3 1 dataset
ChIP NPC GSE154479.TCF3.NPC 454 bp overlap
TEAD1 1 dataset
ChIP WTC11 ENCFF502QUV 405 bp overlap
TEAD4 2 datasets
ChIP H1 ENCFF778PAX 245 bp overlap
ChIP hESC GSE99202.TEAD4.hESC 185 bp overlap
TFAP2C 2 datasets
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 489 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 373 bp overlap
TP53 3 datasets
ChIP H9_ectoderm GSE142050.TP53.H9_ectoderm 315 bp overlap
ChIP hESC_DAMAGED GSE39912.TP53.hESC_DAMAGED 204 bp overlap
ChIP hESC_DIFF GSE39912.TP53.hESC_DIFF 355 bp overlap
TRIM28 2 datasets
ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 469 bp overlap
ChIP hESC GSE115387.TRIM28.hESC 244 bp overlap
USF1 2 datasets
ChIP H1 ENCFF090WVU 241 bp overlap
ChIP WA01 ENCSR000BIU.USF1.WA01 161 bp overlap
USF2 1 dataset
ChIP WTC11 ENCFF139JAW 407 bp overlap
YY1 1 dataset
ChIP WA01 ENCSR000BKD.YY1.WA01 144 bp overlap
ZNF121 1 dataset
ChIP WTC11 ENCFF291API 67 bp overlap
ZNF136 1 dataset
Motif DE_12h DE_12h-ZNF136_MA1588.1 15 bp overlap
ZNF143 2 datasets
ChIP WA09 GSE105028.ZNF143.WA09 248 bp overlap
ChIP WA09_heat-shock GSE105028.ZNF143.WA09_heat-shock 304 bp overlap
ZNF274 2 datasets
ChIP H1 ENCFF434LDY 242 bp overlap
ChIP WA01 ENCSR000EUN.ZNF274.WA01 308 bp overlap
ZNF423 1 dataset
ChIP WTC11 ENCFF574PBR 317 bp overlap