chr10 : 42,690,501 – 42,690,862
361 bp 88 TFs 0 linked genes
This 361 bp open chromatin element has no linked target genes and is bound by 88 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr10:42,685,501 – 42,695,862
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
88 transcription factors
Source
Cell type
AGO1 2 datasets
ChIP Hep-G2 ENCSR555ZMV.AGO1.Hep-G2 279 bp overlap
ChIP Hep-G2 GSE120104.AGO1.Hep-G2 183 bp overlap
AR 14 datasets
ChIP LAPC-4_R1881 GSE148358.AR.LAPC-4_R1881 146 bp overlap
ChIP LNCaP GSE80256.AR.LNCaP 117 bp overlap
ChIP LNCaP-clone-FGC_DHT-ABBV-075 GSE118247.AR.LNCaP-clone-FGC_DHT-ABBV-075 178 bp overlap
ChIP LNCaP-clone-FGC_DHT-ABBV-744 GSE118247.AR.LNCaP-clone-FGC_DHT-ABBV-744 209 bp overlap
ChIP LNCaP_G87R_shFOXA1_Ethanol GSE128883.AR.LNCaP_G87R_shFOXA1_Ethanol 165 bp overlap
ChIP LNCaP_GFP_Ethanol GSE128883.AR.LNCaP_GFP_Ethanol 172 bp overlap
ChIP LNCaP_L388M_shFOXA1_Ethanol GSE128883.AR.LNCaP_L388M_shFOXA1_Ethanol 182 bp overlap
ChIP MCF-7 GSE48930.AR.MCF-7 152 bp overlap
ChIP MDA-MB-453 ERP003503.AR.MDA-MB-453 100 bp overlap
ChIP VCaP_DHT24H_SHFOXP1 GSE58428.AR.VCaP_DHT24H_SHFOXP1 62 bp overlap
ChIP prostate-cancer_PDX_141 GSE130408.AR.prostate-cancer_PDX_141 154 bp overlap
ChIP prostate-cancer_PDX_35 GSE130408.AR.prostate-cancer_PDX_35 278 bp overlap
ChIP prostate-cancer_PDX_81 GSE130408.AR.prostate-cancer_PDX_81 86 bp overlap
ChIP prostate_2815_T GSE130408.AR.prostate_2815_T 200 bp overlap
ARNT 1 dataset
ChIP MCF-7_Ctrl GSE85352.ARNT.MCF-7_Ctrl 276 bp overlap
ARNTL 1 dataset
ChIP U2OS_cordycepin GSE130506.ARNTL.U2OS_cordycepin 171 bp overlap
ARRB1 1 dataset
ChIP prostate GSE55615.ARRB1.prostate 102 bp overlap
BCL6 1 dataset
ChIP OCI-Ly1 GSE29282.BCL6.OCI-Ly1 162 bp overlap
CBFB 1 dataset
ChIP ME-1 GSE46044.CBFB.ME-1 196 bp overlap
CBX1 1 dataset
ChIP Hep-G2 ENCSR819WZE.CBX1.Hep-G2 141 bp overlap
CBX2 1 dataset
ChIP HEK293T GSE34774.CBX2.HEK293T 107 bp overlap
CHD1 1 dataset
ChIP hMSC-TERT_osteoblast GSE89179.CHD1.hMSC-TERT_osteoblast 144 bp overlap
CHD8 1 dataset
ChIP T-47D GSE62428.CHD8.T-47D 171 bp overlap
CLOCK 1 dataset
ChIP U2OS GSE44236.CLOCK.U2OS 210 bp overlap
CREB1 1 dataset
ChIP MCF-7 ENCSR897JAS.CREB1.MCF-7 245 bp overlap
CRY1 1 dataset
ChIP U2OS GSE44236.CRY1.U2OS 152 bp overlap
CTCF 249 datasets
ChIP 22Rv1 ENCFF466OXN 361 bp overlap
ChIP 22Rv1 ENCSR857PBV.CTCF.22Rv1 361 bp overlap
ChIP 22Rv1_hydroxy_10nM_4h ENCSR847XGE.CTCF.22Rv1_hydroxy_10nM_4h 361 bp overlap
ChIP 786-O_NORMOXIA GSE78113.CTCF.786-O_NORMOXIA 354 bp overlap
ChIP A-549 ENCSR000AUF.CTCF.A-549 329 bp overlap
ChIP A-549 ENCSR000AUE.CTCF.A-549 295 bp overlap
ChIP A-549 ENCSR000DNA.CTCF.A-549 185 bp overlap
ChIP A-673 ENCSR611JJS.CTCF.A-673 349 bp overlap
ChIP A2780cis GSE143691.CTCF.A2780cis 258 bp overlap
ChIP A549 ENCFF182TCQ 217 bp overlap
ChIP A673 ENCFF123WOM 335 bp overlap
ChIP BC-3 GSE135740.CTCF.BC-3 278 bp overlap
ChIP BE2C ENCFF757SRF 275 bp overlap
ChIP BE2C ENCSR000DQD.CTCF.BE2C 344 bp overlap
ChIP C4-2B ENCFF821XVN 361 bp overlap
ChIP C4-2B ENCFF821XVN 361 bp overlap
ChIP COLO-829 GSE81945.CTCF.COLO-829 333 bp overlap
ChIP Caco-2 ENCFF753NZV 361 bp overlap
ChIP Caco-2 ENCFF934QYS 217 bp overlap
ChIP D54 ENCSR000DKN.CTCF.D54 211 bp overlap
ChIP DND-41 ENCFF913MRA 308 bp overlap
ChIP DND41 ENCSR000AQU.CTCF.DND41 267 bp overlap
ChIP DOHH2 ENCFF637WNW 361 bp overlap
ChIP DOHH2 ENCSR084RDK.CTCF.DOHH2 361 bp overlap
ChIP GM04025_B-lymphocytes GSE111170.CTCF.GM04025_B-lymphocytes 207 bp overlap
ChIP GM04604 GSE148179.CTCF.GM04604 177 bp overlap
ChIP GM04648 GSE148179.CTCF.GM04648 151 bp overlap
ChIP GM06990 ENCSR000DQW.CTCF.GM06990 190 bp overlap
ChIP GM09236__B-lymphocytes GSE111170.CTCF.GM09236__B-lymphocytes 131 bp overlap
ChIP GM09237_B-lymphocytes GSE111170.CTCF.GM09237_B-lymphocytes 145 bp overlap
ChIP GM12869 ENCSR000DRJ.CTCF.GM12869 98 bp overlap
ChIP GM12872 ENCFF697BYI 285 bp overlap
ChIP GM12878 ENCFF635MMB 216 bp overlap
ChIP GM12878 ENCSR000DZN.CTCF.GM12878 110 bp overlap
ChIP GM12878 ENCSR000DRZ.CTCF.GM12878 100 bp overlap
ChIP GM23338 ENCFF531QOI 188 bp overlap
ChIP GM23338 ENCFF772DML 164 bp overlap
ChIP GP5D GSE51234.CTCF.GP5D 361 bp overlap
ChIP GP5D_SIRAD21 GSE51234.CTCF.GP5D_SIRAD21 263 bp overlap
ChIP H1 ENCFF230QSV 165 bp overlap
ChIP H1 ENCFF414GZI 217 bp overlap
ChIP H1 ENCFF764RHO 274 bp overlap
ChIP H54 ENCFF255TVO 60 bp overlap
ChIP HAP1 GSE152721.CTCF.HAP1 206 bp overlap
ChIP HAP1_2kb GSE152721.CTCF.HAP1_2kb 294 bp overlap
ChIP HAP1_SCC4KO GSE94992.CTCF.HAP1_SCC4KO 165 bp overlap
ChIP HAP1_WT GSE126634.CTCF.HAP1_WT 248 bp overlap
ChIP HAP1_clone21 GSE152721.CTCF.HAP1_clone21 294 bp overlap
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 307 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_1 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_1 226 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_2 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_2 291 bp overlap
ChIP HAP1_clone21_TSS-CRISPR GSE152721.CTCF.HAP1_clone21_TSS-CRISPR 297 bp overlap
ChIP HAP1_clone25 GSE152721.CTCF.HAP1_clone25 199 bp overlap
ChIP HCT-116 GSE131606.CTCF.HCT-116 361 bp overlap
ChIP HCT-116 ENCSR240PRQ.CTCF.HCT-116 361 bp overlap
ChIP HCT-116 ENCSR000DTO.CTCF.HCT-116 269 bp overlap
ChIP HCT-116 GSE92879.CTCF.HCT-116 253 bp overlap
ChIP HCT-116_RAD21-mAC GSE104888.CTCF.HCT-116_RAD21-mAC 361 bp overlap
ChIP HCT-116_RAD21-mAC_500uM_auxin GSE104888.CTCF.HCT-116_RAD21-mAC_500uM_auxin 325 bp overlap
ChIP HCT116 ENCFF003KHP 185 bp overlap
ChIP HCT116 ENCFF209YMI 256 bp overlap
ChIP HEC-1-B_R1-insertion GSE140868.CTCF.HEC-1-B_R1-insertion 87 bp overlap
ChIP HEC-1-B_WT GSE140868.CTCF.HEC-1-B_WT 106 bp overlap
ChIP HEK293 ENCFF498RMM 261 bp overlap
ChIP HEK293 ENCSR000DTW.CTCF.HEK293 179 bp overlap
ChIP HEK293T GSE115862.CTCF.HEK293T 205 bp overlap
ChIP HL-60 GSE131577.CTCF.HL-60 201 bp overlap
ChIP HMS001 GSE143026.CTCF.HMS001 99 bp overlap
ChIP HT-1080_CBL0137-6h GSE122462.CTCF.HT-1080_CBL0137-6h 360 bp overlap
ChIP HUES-64_DNMT-KO GSE97394.CTCF.HUES-64_DNMT-KO 226 bp overlap
ChIP HeLa GSE126990.CTCF.HeLa 234 bp overlap
ChIP HeLa-Kyoto GSE138405.CTCF.HeLa-Kyoto 234 bp overlap
ChIP HeLa-Kyoto_PDS5-depleted GSE102884.CTCF.HeLa-Kyoto_PDS5-depleted 166 bp overlap
ChIP HeLa-Kyoto_WAPL-depleted GSE102884.CTCF.HeLa-Kyoto_WAPL-depleted 192 bp overlap
ChIP HeLa-Kyoto_WAPL_PDS-depleted GSE102884.CTCF.HeLa-Kyoto_WAPL_PDS-depleted 198 bp overlap
ChIP HeLa-S3 ENCFF565UFR 161 bp overlap
ChIP HeLa-S3 ENCFF626XQK 237 bp overlap
ChIP HeLa-S3 ENCSR000AOA.CTCF.HeLa-S3 269 bp overlap
ChIP HeLa-S3 ENCSR000DUB.CTCF.HeLa-S3 272 bp overlap
ChIP HeLa-S3 ENCSR000DLO.CTCF.HeLa-S3 128 bp overlap
ChIP HeLa-S3_biotin GSE108869.CTCF.HeLa-S3_biotin 319 bp overlap
ChIP HeLa-S3_shCtrl GSE137848.CTCF.HeLa-S3_shCtrl 336 bp overlap
ChIP HeLa-S3_unsynchro GSE108173.CTCF.HeLa-S3_unsynchro 277 bp overlap
ChIP HeLa_dC9Sun-D3AMut_MIR152 GSE107607.CTCF.HeLa_dC9Sun-D3AMut_MIR152 193 bp overlap
ChIP HeLa_dC9Sun-D3A_CDCC85C GSE107607.CTCF.HeLa_dC9Sun-D3A_CDCC85C 260 bp overlap
ChIP HeLa_dC9Sun-D3A_MIR152 GSE107607.CTCF.HeLa_dC9Sun-D3A_MIR152 212 bp overlap
ChIP HeLa_dC9Sun-D3A_SHB GSE107607.CTCF.HeLa_dC9Sun-D3A_SHB 344 bp overlap
ChIP Hep-G2 ENCSR000DUG.CTCF.Hep-G2 52 bp overlap
ChIP Hep-G2 ENCSR000DUG.CTCF.Hep-G2 236 bp overlap
ChIP Hep-G2 ENCSR000AMA.CTCF.Hep-G2 232 bp overlap
ChIP Hep-G2 ERP000209.CTCF.Hep-G2 232 bp overlap
ChIP Hep-G2 ENCSR000BIE.CTCF.Hep-G2 194 bp overlap
ChIP Hep-G2 ENCSR000DLS.CTCF.Hep-G2 149 bp overlap
ChIP HepG2 ENCFF127KUP 231 bp overlap
ChIP HepG2 ENCFF194VBQ 293 bp overlap
ChIP HepG2 ENCFF348BUL 197 bp overlap
ChIP HepG2 ENCFF668CTD 145 bp overlap
ChIP HepG2 ENCFF757EKU 187 bp overlap
ChIP K-562 ENCSR000AKO.CTCF.K-562 318 bp overlap
ChIP K-562 GSE92879.CTCF.K-562 285 bp overlap
ChIP K-562 ENCSR000DMA.CTCF.K-562 248 bp overlap
ChIP K-562 GSE70764.CTCF.K-562 221 bp overlap
ChIP K-562 ENCSR000EGM.CTCF.K-562 195 bp overlap
ChIP K-562 ENCSR000BPJ.CTCF.K-562 183 bp overlap
ChIP K-562 ENCSR000DWE.CTCF.K-562 159 bp overlap
ChIP K-562_11698 GSE131349.CTCF.K-562_11698 127 bp overlap
ChIP K-562_13004 GSE131349.CTCF.K-562_13004 139 bp overlap
ChIP K-562_14259 GSE131349.CTCF.K-562_14259 219 bp overlap
ChIP K-562_15923 GSE131349.CTCF.K-562_15923 160 bp overlap
ChIP K-562_5635 GSE131349.CTCF.K-562_5635 203 bp overlap
ChIP K-562_7140 GSE131349.CTCF.K-562_7140 112 bp overlap
ChIP K-562_8004 GSE131349.CTCF.K-562_8004 224 bp overlap
ChIP K-562_8005 GSE131349.CTCF.K-562_8005 99 bp overlap
ChIP K-562_CRISPRa_N4293 GSE131349.CTCF.K-562_CRISPRa_N4293 124 bp overlap
ChIP K-562_MonoC GSE137216.CTCF.K-562_MonoC 267 bp overlap
ChIP K-562_MonoN GSE137216.CTCF.K-562_MonoN 202 bp overlap
ChIP K-562_RF2-insertion GSE140868.CTCF.K-562_RF2-insertion 181 bp overlap
ChIP K-562_RF2-mutation GSE140868.CTCF.K-562_RF2-mutation 270 bp overlap
ChIP K-562_RabbitC GSE137216.CTCF.K-562_RabbitC 242 bp overlap
ChIP K-562_WT GSE140868.CTCF.K-562_WT 183 bp overlap
ChIP K-562_dCas9-KRAB GSE132212.CTCF.K-562_dCas9-KRAB 343 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.CTCF.K-562_dCas9-LSD1 296 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.CTCF.K-562_enCRISPRi-LK 273 bp overlap
ChIP K562 ENCFF082GOI 56 bp overlap
ChIP K562 ENCFF111MGE 233 bp overlap
ChIP K562 ENCFF400DFR 241 bp overlap
ChIP K562 ENCFF430KTH 358 bp overlap
ChIP K562 ENCFF598YSU 271 bp overlap
ChIP KARPAS422 ENCSR113REG.CTCF.KARPAS422 346 bp overlap
ChIP Kelly_resistant GSE103030.CTCF.Kelly_resistant 361 bp overlap
ChIP Kelly_resistant_JQ1 GSE103030.CTCF.Kelly_resistant_JQ1 231 bp overlap
ChIP Kelly_sensitive GSE103030.CTCF.Kelly_sensitive 361 bp overlap
ChIP Kelly_shB4-res GSE115248.CTCF.Kelly_shB4-res 340 bp overlap
ChIP LNCaP clone FGC ENCFF519YVI 181 bp overlap
ChIP LNCaP clone FGC ENCFF957KCI 181 bp overlap
ChIP LNCaP_hydroxy_10nM_4h ENCSR673WZL.CTCF.LNCaP_hydroxy_10nM_4h 343 bp overlap
ChIP Loucy ENCFF359TVQ 225 bp overlap
ChIP Loucy ENCSR464DKE.CTCF.Loucy 361 bp overlap
ChIP MCF-10A GSE98551.CTCF.MCF-10A 226 bp overlap
ChIP MCF-10CA1a GSE98551.CTCF.MCF-10CA1a 237 bp overlap
ChIP MCF-7 ENCFF139NQI 137 bp overlap
ChIP MCF-7 ENCFF162GNE 74 bp overlap
ChIP MCF-7 ENCFF198DQX 151 bp overlap
ChIP MCF-7 ENCFF210JUZ 211 bp overlap
ChIP MCF-7 ENCFF414SZG 149 bp overlap
ChIP MCF-7 ENCFF424NQR 145 bp overlap
ChIP MCF-7 ENCFF494VXA 173 bp overlap
ChIP MCF-7 ENCFF844STM 169 bp overlap
ChIP MCF-7 ENCFF954TUV 151 bp overlap
ChIP MCF-7 ENCSR560BUE.CTCF.MCF-7 356 bp overlap
ChIP MCF-7 ENCSR000DWH.CTCF.MCF-7 333 bp overlap
ChIP MCF-7 ERP000380.CTCF.MCF-7 289 bp overlap
ChIP MCF-7 GSE137216.CTCF.MCF-7 276 bp overlap
ChIP MCF-7 ENCSR000AHD.CTCF.MCF-7 260 bp overlap
ChIP MCF-7 ENCSR000DMR.CTCF.MCF-7 257 bp overlap
ChIP MCF-7 GSE70764.CTCF.MCF-7 223 bp overlap
ChIP MCF-7 ENCSR000DMS.CTCF.MCF-7 207 bp overlap
ChIP MCF-7L_TAMR GSE108787.CTCF.MCF-7L_TAMR 236 bp overlap
ChIP MCF-7L_t0 GSE108787.CTCF.MCF-7L_t0 361 bp overlap
ChIP MCF-7L_t1 GSE108787.CTCF.MCF-7L_t1 361 bp overlap
ChIP MCF-7L_t16 GSE108787.CTCF.MCF-7L_t16 361 bp overlap
ChIP MCF-7L_t24 GSE108787.CTCF.MCF-7L_t24 361 bp overlap
ChIP MCF-7L_t4 GSE108787.CTCF.MCF-7L_t4 265 bp overlap
ChIP MCF-7_E2 ERP000380.CTCF.MCF-7_E2 285 bp overlap
ChIP MCF-7_E2_SHCTCF ERP000209.CTCF.MCF-7_E2_SHCTCF 193 bp overlap
ChIP MCF-7_HYPOXIA GSE78113.CTCF.MCF-7_HYPOXIA 361 bp overlap
ChIP MCF-7_NORMOXIA GSE78113.CTCF.MCF-7_NORMOXIA 361 bp overlap
ChIP MCF-7_TAM ERP000380.CTCF.MCF-7_TAM 291 bp overlap
ChIP MCF-7_TAM ERP000783.CTCF.MCF-7_TAM 158 bp overlap
ChIP MDA-MB-157 GSE116868.CTCF.MDA-MB-157 361 bp overlap
ChIP MDA-MB-435_Asynchronous GSE102019.CTCF.MDA-MB-435_Asynchronous 347 bp overlap
ChIP NB4 ENCFF155DNY 251 bp overlap
ChIP NB4 ENCSR000DWN.CTCF.NB4 166 bp overlap
ChIP NB69 GSE101295.CTCF.NB69 343 bp overlap
ChIP NCI-H929 ENCFF305JAB 177 bp overlap
ChIP NCI-H929 ENCSR634OAQ.CTCF.NCI-H929 358 bp overlap
ChIP OCI-LY1 ENCFF455ESK 361 bp overlap
ChIP OCI-LY7 ENCFF086AXQ 361 bp overlap
ChIP OCI-Ly1 ENCSR072EUE.CTCF.OCI-Ly1 361 bp overlap
ChIP OCI-Ly7 ENCSR027HML.CTCF.OCI-Ly7 319 bp overlap
ChIP OVCAR-8 GSE70764.CTCF.OVCAR-8 308 bp overlap
ChIP PANC-1 ENCSR203QEB.CTCF.PANC-1 319 bp overlap
ChIP PC-3 ENCFF487TUI 187 bp overlap
ChIP PC-3 ENCSR359LOD.CTCF.PC-3 361 bp overlap
ChIP PC-9 ENCFF539ULB 361 bp overlap
ChIP Panc1 ENCFF056JQX 345 bp overlap
ChIP RH4 GSE83726.CTCF.RH4 190 bp overlap
ChIP RWPE-2 ENCSR856JJB.CTCF.RWPE-2 301 bp overlap
ChIP SH-SY5Y GSE101295.CTCF.SH-SY5Y 336 bp overlap
ChIP SK-MEL-147 GSE94488.CTCF.SK-MEL-147 198 bp overlap
ChIP SK-N-AS GSE101295.CTCF.SK-N-AS 330 bp overlap
ChIP SK-N-SH ENCFF575DMG 361 bp overlap
ChIP SK-N-SH ENCFF731NJX 138 bp overlap
ChIP SK-N-SH ENCSR541AMF.CTCF.SK-N-SH 361 bp overlap
ChIP SK-N-SH ENCSR000DXQ.CTCF.SK-N-SH 361 bp overlap
ChIP SK-N-SH ENCSR000EIC.CTCF.SK-N-SH 281 bp overlap
ChIP SK-N-SH GSE76815.CTCF.SK-N-SH 224 bp overlap
ChIP SK-N-SH ENCSR000BLX.CTCF.SK-N-SH 182 bp overlap
ChIP SU-DHL-6 ENCFF116KKR 361 bp overlap
ChIP SUM159 GSE46055.CTCF.SUM159 88 bp overlap
ChIP T-47D GSE120162.CTCF.T-47D 153 bp overlap
ChIP T-47D_NaCl-isotonic GSE111923.CTCF.T-47D_NaCl-isotonic 361 bp overlap
ChIP T-47D_NaCl-isotonic-triptolide GSE111923.CTCF.T-47D_NaCl-isotonic-triptolide 361 bp overlap
ChIP T-47D_NaCl-triptolide GSE111923.CTCF.T-47D_NaCl-triptolide 361 bp overlap
ChIP T-47D_Y537S GSE148277.CTCF.T-47D_Y537S 346 bp overlap
ChIP T-47D_serum GSE120162.CTCF.T-47D_serum 323 bp overlap
ChIP T-47D_triptolide GSE111923.CTCF.T-47D_triptolide 361 bp overlap
ChIP THP-1_Pam3csk-020m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-020m-Flavo-000m 132 bp overlap
ChIP THP-1_Pam3csk-180m-Flavo-060m GSE103477.CTCF.THP-1_Pam3csk-180m-Flavo-060m 164 bp overlap
ChIP U2OS_ana-telopphase GSE141081.CTCF.U2OS_ana-telopphase 237 bp overlap
ChIP U2OS_interphase GSE141081.CTCF.U2OS_interphase 238 bp overlap
ChIP VCaP ENCFF858YQT 361 bp overlap
ChIP VCaP ENCSR265ARE.CTCF.VCaP 340 bp overlap
ChIP WA01 ENCSR000BNH.CTCF.WA01 125 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 121 bp overlap
ChIP WERI-Rb-1 ENCFF349QKF 231 bp overlap
ChIP WERI-Rb-1 ENCSR000DXW.CTCF.WERI-Rb-1 178 bp overlap
ChIP WTC11 ENCFF658QVH 361 bp overlap
ChIP ZR751 ERP000783.CTCF.ZR751 147 bp overlap
ChIP delta-47 GSE70764.CTCF.delta-47 334 bp overlap
ChIP erythroblast_adult_erythroblasts GSE102184.CTCF.erythroblast_adult_erythroblasts 212 bp overlap
ChIP erythroid_Don001 GSE137982.CTCF.erythroid_Don001 169 bp overlap
ChIP esophagus_squamous-epithelium ENCSR450FRI.CTCF.esophagus_squamous-epithelium 342 bp overlap
ChIP fetal_erythroblasts GSE102184.CTCF.fetal_erythroblasts 162 bp overlap
ChIP glioblastoma_GBM3565 GSE139416.CTCF.glioblastoma_GBM3565 232 bp overlap
ChIP hESC_NAIVE GSE69646.CTCF.hESC_NAIVE 283 bp overlap
ChIP hiPSC_CVI GSE106870.CTCF.hiPSC_CVI 322 bp overlap
ChIP hiPSC_HUES9 GSE106870.CTCF.hiPSC_HUES9 170 bp overlap
ChIP hiPSC_IB12 GSE106870.CTCF.hiPSC_IB12 265 bp overlap
ChIP hiPSC_IB7 GSE106870.CTCF.hiPSC_IB7 258 bp overlap
ChIP hiPSC_IIA11 GSE106870.CTCF.hiPSC_IIA11 158 bp overlap
ChIP hiPSC_IID12 GSE106870.CTCF.hiPSC_IID12 229 bp overlap
ChIP hiPSC_IIIB12 GSE106870.CTCF.hiPSC_IIIB12 120 bp overlap
ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 254 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.CTCF.hiPSC_failed-genome-editing 232 bp overlap
ChIP hiPSC_parental-line GSE106870.CTCF.hiPSC_parental-line 225 bp overlap
ChIP islet ERP004003.CTCF.islet 206 bp overlap
ChIP keratinocyte ENCFF667ULX 270 bp overlap
ChIP keratinocyte ENCSR000DWX.CTCF.keratinocyte 205 bp overlap
ChIP keratinocyte ENCSR000DNC.CTCF.keratinocyte 108 bp overlap
ChIP leukemia GSE142161.CTCF.leukemia 262 bp overlap
ChIP leukemia_CEBPA-24h GSE142161.CTCF.leukemia_CEBPA-24h 201 bp overlap
ChIP neuroblastoma GSE115862.CTCF.neuroblastoma 284 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 137 bp overlap
ChIP pancreas_body ENCSR408XTO.CTCF.pancreas_body 148 bp overlap
ChIP placenta ENCFF029PHY 361 bp overlap
ChIP primary-glioblastoma_G523 GSE121601.CTCF.primary-glioblastoma_G523 198 bp overlap
ChIP primary-glioblastoma_G583 GSE121601.CTCF.primary-glioblastoma_G583 145 bp overlap
ChIP testis ENCSR753RME.CTCF.testis 270 bp overlap
CTCFL 1 dataset
ChIP Kelly_resistant GSE103030.CTCFL.Kelly_resistant 120 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF896HSY 113 bp overlap
EED 1 dataset
ChIP ProEs GSE59087.EED.ProEs 74 bp overlap
EPAS1 1 dataset
ChIP 501-mel GSE95280.EPAS1.501-mel 214 bp overlap
ERG 1 dataset
ChIP TSU-1621MT GSE60477.ERG.TSU-1621MT 361 bp overlap
ESR1 15 datasets
ChIP Ishikawa_E2-1h GSE129803.ESR1.Ishikawa_E2-1h 152 bp overlap
ChIP Ishikawa_siETV4-72h GSE129803.ESR1.Ishikawa_siETV4-72h 276 bp overlap
ChIP Ishikawa_siNTC-72h GSE129803.ESR1.Ishikawa_siNTC-72h 361 bp overlap
ChIP Ishikawa_siNTC-96h GSE129803.ESR1.Ishikawa_siNTC-96h 278 bp overlap
ChIP MCF-7 GSE119057.ESR1.MCF-7 326 bp overlap
ChIP MCF-7_E2 GSE14664.ESR1.MCF-7_E2 94 bp overlap
ChIP MCF-7_ER_t10 GSE119057.ESR1.MCF-7_ER_t10 361 bp overlap
ChIP MCF-7_ER_t20 GSE119057.ESR1.MCF-7_ER_t20 361 bp overlap
ChIP MCF-7_ER_t30 GSE119057.ESR1.MCF-7_ER_t30 344 bp overlap
ChIP MCF-7_ER_t40 GSE119057.ESR1.MCF-7_ER_t40 329 bp overlap
ChIP MCF-7_ER_t50 GSE119057.ESR1.MCF-7_ER_t50 361 bp overlap
ChIP MCF-7_ER_t60 GSE119057.ESR1.MCF-7_ER_t60 361 bp overlap
ChIP MCF-7_ER_t70 GSE119057.ESR1.MCF-7_ER_t70 361 bp overlap
ChIP MCF-7_ER_t80 GSE119057.ESR1.MCF-7_ER_t80 359 bp overlap
ChIP MCF-7_ER_t90 GSE119057.ESR1.MCF-7_ER_t90 311 bp overlap
EZH2 3 datasets
ChIP SU-DHL-6 GSE134136.EZH2.SU-DHL-6 172 bp overlap
ChIP prostate-cancer_HA GSE107780.EZH2.prostate-cancer_HA 278 bp overlap
ChIP prostate-cancer_plko GSE107780.EZH2.prostate-cancer_plko 146 bp overlap
FOXA1 3 datasets
ChIP MCF-7_TNF GSE59530.FOXA1.MCF-7_TNF 174 bp overlap
ChIP T-47D_JC4744 GSE126004.FOXA1.T-47D_JC4744 152 bp overlap
ChIP prostate_2483_T GSE130408.FOXA1.prostate_2483_T 210 bp overlap
FOXO1 1 dataset
ChIP CD34 GSE80773.FOXO1.CD34 178 bp overlap
GATA2 1 dataset
ChIP ME-1_CBFB-MYH11-KD GSE117138.GATA2.ME-1_CBFB-MYH11-KD 245 bp overlap
GFI1B 1 dataset
ChIP K-562 ENCSR509GDT.GFI1B.K-562 119 bp overlap
GRHL2 2 datasets
ChIP MCF-7-WS8_VEH GSE113092.GRHL2.MCF-7-WS8_VEH 314 bp overlap
ChIP OVCAR-3 GSE71018.GRHL2.OVCAR-3 136 bp overlap
HEXIM1 1 dataset
ChIP HCT-116 GSE72622.HEXIM1.HCT-116 223 bp overlap
HIVEP1 1 dataset
ChIP Hep-G2 ENCSR697WMX.HIVEP1.Hep-G2 203 bp overlap
HNRNPLL 1 dataset
ChIP Hep-G2 ENCSR804HMZ.HNRNPLL.Hep-G2 172 bp overlap
HOXB13 5 datasets
ChIP prostate-cancer_PDX_141 GSE130408.HOXB13.prostate-cancer_PDX_141 166 bp overlap
ChIP prostate-cancer_PDX_170-2 GSE130408.HOXB13.prostate-cancer_PDX_170-2 93 bp overlap
ChIP prostate-cancer_PDX_70 GSE130408.HOXB13.prostate-cancer_PDX_70 146 bp overlap
ChIP prostate_2483_T GSE130408.HOXB13.prostate_2483_T 238 bp overlap
ChIP prostate_P19_T GSE130408.HOXB13.prostate_P19_T 192 bp overlap
HSF1 4 datasets
ChIP MCF-7 GSE38901.HSF1.MCF-7 165 bp overlap
ChIP MCF-7_hyperthermia-15min GSE137558.HSF1.MCF-7_hyperthermia-15min 290 bp overlap
ChIP U2OS_HEAT GSE60984.HSF1.U2OS_HEAT 274 bp overlap
ChIP U2OS_HEAT_20 GSE60984.HSF1.U2OS_HEAT_20 330 bp overlap
KDM4C 1 dataset
ChIP KYSE-150 GSE53938.KDM4C.KYSE-150 202 bp overlap
KDM5B 3 datasets
ChIP SUM185 GSE46055.KDM5B.SUM185 130 bp overlap
ChIP SUM185_SHCTCF GSE46055.KDM5B.SUM185_SHCTCF 116 bp overlap
ChIP T-47D GSE46055.KDM5B.T-47D 108 bp overlap
MAX 1 dataset
ChIP MCF-7 ENCSR000BUL.MAX.MCF-7 115 bp overlap
MAZ 1 dataset
ChIP K-562 ENCSR000EFX.MAZ.K-562 143 bp overlap
MED1 4 datasets
ChIP HCT-116_shLuc GSE121798.MED1.HCT-116_shLuc 152 bp overlap
ChIP HCT-116_shLuc_thaps GSE121798.MED1.HCT-116_shLuc_thaps 87 bp overlap
ChIP MCF-7_SHRARS GSE60270.MED1.MCF-7_SHRARS 224 bp overlap
ChIP VCaP_R1881 GSE148358.MED1.VCaP_R1881 151 bp overlap
MED26 1 dataset
ChIP U2OS_SHEP400 GSE73742.MED26.U2OS_SHEP400 214 bp overlap
MIER1 1 dataset
ChIP K-562 ENCSR426MDV.MIER1.K-562 235 bp overlap
MTA1 1 dataset
ChIP Hep-G2 ENCSR983KRB.MTA1.Hep-G2 92 bp overlap
MXI1 1 dataset
ChIP SK-N-SH ENCSR000EIA.MXI1.SK-N-SH 142 bp overlap
MYC 5 datasets
ChIP MCF-7 ENCSR000DMQ.MYC.MCF-7 179 bp overlap
ChIP U2OS_Doxy GSE77356.MYC.U2OS_Doxy 183 bp overlap
ChIP U2OS_Doxy GSE44672.MYC.U2OS_Doxy 161 bp overlap
ChIP U2OS_HA-OmoMYCwt_EtOH GSE77328.MYC.U2OS_HA-OmoMYCwt_EtOH 195 bp overlap
ChIP U2OS_SHRCTR GSE77356.MYC.U2OS_SHRCTR 99 bp overlap
MYCN 1 dataset
ChIP SHEP-21N GSE80151.MYCN.SHEP-21N 150 bp overlap
MYOD1 1 dataset
ChIP IMR-90_GM GSE128527.MYOD1.IMR-90_GM 147 bp overlap
NCOA2 1 dataset
ChIP MCF-7 ERP000901.NCOA2.MCF-7 133 bp overlap
NFATC3 1 dataset
ChIP Hep-G2 GSE97661.NFATC3.Hep-G2 259 bp overlap
NOTCH3 1 dataset
ChIP TALL-1_DMSO GSE104261.NOTCH3.TALL-1_DMSO 153 bp overlap
NR3C1 3 datasets
ChIP A-549 ENCSR000BJR.NR3C1.A-549 148 bp overlap
ChIP Ishikawa ENCSR000BJC.NR3C1.Ishikawa 101 bp overlap
ChIP K-562_GLUCC ERP007081.NR3C1.K-562_GLUCC 74 bp overlap
OGG1 2 datasets
ChIP HEK293 GSE89017.OGG1.HEK293 264 bp overlap
ChIP HEK293_15min GSE89017.OGG1.HEK293_15min 246 bp overlap
OLIG2 1 dataset
ChIP brain-prefrontal-cortex_2017014 GSE129039.OLIG2.brain-prefrontal-cortex_2017014 90 bp overlap
POLR2A 1 dataset
ChIP MCF-7 ENCFF411WCU 248 bp overlap
POU2F1 1 dataset
ChIP T-47D_D538G GSE148277.POU2F1.T-47D_D538G 220 bp overlap
POU4F2 1 dataset
ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 75 bp overlap
POU5F1 1 dataset
ChIP BG03 GSE21614.POU5F1.BG03 176 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 361 bp overlap
RAD21 43 datasets
ChIP A-549 ENCSR000BUC.RAD21.A-549 135 bp overlap
ChIP A549 ENCFF047SFC 217 bp overlap
ChIP GP5D GSE51234.RAD21.GP5D 346 bp overlap
ChIP H1 ENCFF698EWO 241 bp overlap
ChIP H1 ENCFF967OJF 241 bp overlap
ChIP HCT-116 GSE131606.RAD21.HCT-116 361 bp overlap
ChIP HCT-116 GSE121355.RAD21.HCT-116 348 bp overlap
ChIP HCT-116 ENCSR000BSB.RAD21.HCT-116 190 bp overlap
ChIP HCT-116_RAD21-mAC GSE104888.RAD21.HCT-116_RAD21-mAC 268 bp overlap
ChIP HCT116 ENCFF568PEO 289 bp overlap
ChIP HEK293_siE1A GSE130135.RAD21.HEK293_siE1A 361 bp overlap
ChIP Hep-G2 ENCSR000EEG.RAD21.Hep-G2 213 bp overlap
ChIP Hep-G2 ENCSR054FKH.RAD21.Hep-G2 178 bp overlap
ChIP Hep-G2 ERP000209.RAD21.Hep-G2 154 bp overlap
ChIP HepG2 ENCFF360ZSW 217 bp overlap
ChIP HepG2 ENCFF906QIS 130 bp overlap
ChIP HepG2 ENCFF963UBJ 242 bp overlap
ChIP Ishikawa ENCFF570JVV 196 bp overlap
ChIP Ishikawa ENCSR000BTU.RAD21.Ishikawa 208 bp overlap
ChIP K-562 ENCSR000BKV.RAD21.K-562 190 bp overlap
ChIP K-562_RF2-insertion GSE140868.RAD21.K-562_RF2-insertion 94 bp overlap
ChIP K562 ENCFF169SQI 171 bp overlap
ChIP MCF-7 ENCFF694KOM 301 bp overlap
ChIP MCF-7 ENCFF724VCQ 257 bp overlap
ChIP MCF-7 GSE72082.RAD21.MCF-7 322 bp overlap
ChIP MCF-7 ENCSR703TNG.RAD21.MCF-7 290 bp overlap
ChIP MCF-7 ENCSR000BTQ.RAD21.MCF-7 254 bp overlap
ChIP MCF-7 GSE137216.RAD21.MCF-7 259 bp overlap
ChIP MCF-7 ERP000209.RAD21.MCF-7 242 bp overlap
ChIP MCF-7_E2 ERP000209.RAD21.MCF-7_E2 205 bp overlap
ChIP MCF-7_E2_SHCTCF ERP000209.RAD21.MCF-7_E2_SHCTCF 107 bp overlap
ChIP RH4 GSE83726.RAD21.RH4 178 bp overlap
ChIP SK-N-SH ENCFF747MAS 131 bp overlap
ChIP SK-N-SH ENCSR000EHX.RAD21.SK-N-SH 274 bp overlap
ChIP SK-N-SH GSE76815.RAD21.SK-N-SH 156 bp overlap
ChIP T-47D_triptolide GSE111923.RAD21.T-47D_triptolide 242 bp overlap
ChIP hiPSC_CVI GSE106870.RAD21.hiPSC_CVI 259 bp overlap
ChIP hiPSC_IB12 GSE106870.RAD21.hiPSC_IB12 195 bp overlap
ChIP hiPSC_IIA12 GSE106870.RAD21.hiPSC_IIA12 237 bp overlap
ChIP hiPSC_IIIB12 GSE106870.RAD21.hiPSC_IIIB12 172 bp overlap
ChIP hiPSC_IV8 GSE106870.RAD21.hiPSC_IV8 300 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.RAD21.hiPSC_failed-genome-editing 130 bp overlap
ChIP hiPSC_parental-line GSE106870.RAD21.hiPSC_parental-line 265 bp overlap
RAD51 1 dataset
ChIP U2OS_CX-5461 GSE90967.RAD51.U2OS_CX-5461 118 bp overlap
RBFOX2 1 dataset
ChIP K-562 ENCSR822LBD.RBFOX2.K-562 153 bp overlap
RBM39 3 datasets
ChIP HepG2 ENCFF084YZE 289 bp overlap
ChIP HepG2 ENCFF084YZE 361 bp overlap
ChIP HepG2 ENCFF801JUH 361 bp overlap
REST 1 dataset
ChIP K562 ENCFF688UKW 360 bp overlap
RUNX1T1 1 dataset
ChIP Kasumi-1_E2 GSE102697.RUNX1T1.Kasumi-1_E2 153 bp overlap
RXR 1 dataset
ChIP TSU-1621MT GSE60477.RXR.TSU-1621MT 221 bp overlap
SCRT1 1 dataset
ChIP HEK293 ENCSR605MGM.SCRT1.HEK293 138 bp overlap
SCRT2 2 datasets
ChIP HEK293 ENCFF711QQB 100 bp overlap
ChIP HEK293 ENCFF711QQB 361 bp overlap
SIN3A 1 dataset
ChIP SK-N-SH ENCSR000BPB.SIN3A.SK-N-SH 212 bp overlap
SMAD1 1 dataset
ChIP Hep-G2 ENCSR213QOZ.SMAD1.Hep-G2 252 bp overlap
SMARCA4 1 dataset
ChIP MCF-7_ARID1A-KO_clone14 GSE123284.SMARCA4.MCF-7_ARID1A-KO_clone14 346 bp overlap
SMC1 3 datasets
ChIP DKO GSE131606.SMC1.DKO 350 bp overlap
ChIP HCT-116 GSE131606.SMC1.HCT-116 287 bp overlap
ChIP HCT-116_RAD21-mAC GSE104888.SMC1.HCT-116_RAD21-mAC 233 bp overlap
SMC1A 5 datasets
ChIP A-549 GSE76893.SMC1A.A-549 134 bp overlap
ChIP Hep-G2 GSE76893.SMC1A.Hep-G2 257 bp overlap
ChIP MCF-7 GSE76893.SMC1A.MCF-7 221 bp overlap
ChIP MCF-7 GSE115602.SMC1A.MCF-7 193 bp overlap
ChIP MCF-7_EtOH GSE115602.SMC1A.MCF-7_EtOH 360 bp overlap
SMC3 9 datasets
ChIP GP5D GSE51234.SMC3.GP5D 361 bp overlap
ChIP HeLa GSE126990.SMC3.HeLa 157 bp overlap
ChIP HeLa-Kyoto GSE102884.SMC3.HeLa-Kyoto 157 bp overlap
ChIP HeLa-Kyoto GSE138405.SMC3.HeLa-Kyoto 157 bp overlap
ChIP HeLa-Kyoto_PDS5-depleted GSE102884.SMC3.HeLa-Kyoto_PDS5-depleted 169 bp overlap
ChIP HeLa-Kyoto_WAPL_PDS-depleted GSE102884.SMC3.HeLa-Kyoto_WAPL_PDS-depleted 206 bp overlap
ChIP K-562 ENCSR000EGW.SMC3.K-562 176 bp overlap
ChIP SK-N-SH ENCFF791WFB 236 bp overlap
ChIP SK-N-SH ENCSR000EHW.SMC3.SK-N-SH 153 bp overlap
SPI1 1 dataset
ChIP macrophage_IFNG GSE47188.SPI1.macrophage_IFNG 252 bp overlap
STAG1 8 datasets
ChIP HeLa GSE126990.STAG1.HeLa 258 bp overlap
ChIP HeLa-Kyoto GSE138405.STAG1.HeLa-Kyoto 258 bp overlap
ChIP Hep-G2 ENCSR167MTG.STAG1.Hep-G2 293 bp overlap
ChIP Hep-G2 ERP000209.STAG1.Hep-G2 224 bp overlap
ChIP HepG2 ENCFF843EBZ 251 bp overlap
ChIP MCF-7 ERP000209.STAG1.MCF-7 237 bp overlap
ChIP MCF-7_E2 ERP000209.STAG1.MCF-7_E2 258 bp overlap
ChIP MCF-7_E2_SHCTCF ERP000209.STAG1.MCF-7_E2_SHCTCF 146 bp overlap
STAG2 2 datasets
ChIP HL-60 GSE131577.STAG2.HL-60 100 bp overlap
ChIP OCI-AML-3 GSE111537.STAG2.OCI-AML-3 133 bp overlap
STAT3 1 dataset
ChIP WA01 ERP004237.STAT3.WA01 181 bp overlap
TBL1X 1 dataset
ChIP HEK293T GSE35197.TBL1X.HEK293T 188 bp overlap
TRIM22 1 dataset
ChIP MCF-7 ENCSR875PEI.TRIM22.MCF-7 214 bp overlap
TRIM28 3 datasets
ChIP HCT-116 GSE72622.TRIM28.HCT-116 190 bp overlap
ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 184 bp overlap
ChIP hESC GSE115387.TRIM28.hESC 174 bp overlap
XRCC5 2 datasets
ChIP K-562 GSE120104.XRCC5.K-562 177 bp overlap
ChIP K-562 ENCSR506KWJ.XRCC5.K-562 148 bp overlap
YY1 1 dataset
ChIP Huh-7 GSE97411.YY1.Huh-7 71 bp overlap
ZBTB2 2 datasets
ChIP GM12878 GSE97661.ZBTB2.GM12878 94 bp overlap
ChIP Hep-G2 GSE97661.ZBTB2.Hep-G2 116 bp overlap
ZBTB33 1 dataset
ChIP K-562 ENCSR876GXA.ZBTB33.K-562 235 bp overlap
ZBTB48 1 dataset
ChIP U2OS_ZBTB48-KO GSE96776.ZBTB48.U2OS_ZBTB48-KO 164 bp overlap
ZBTB5 1 dataset
ChIP K-562 ENCSR389PWB.ZBTB5.K-562 194 bp overlap
ZNF121 1 dataset
ChIP WTC11 ENCFF291API 297 bp overlap
ZNF143 4 datasets
ChIP FLP143HA_T4 GSE39263.ZNF143.FLP143HA_T4 206 bp overlap
ChIP Hep-G2 ENCSR101FJT.ZNF143.Hep-G2 111 bp overlap
ChIP K-562 GSE39263.ZNF143.K-562 262 bp overlap
ChIP MCF-7 GSE76454.ZNF143.MCF-7 289 bp overlap
ZNF550 1 dataset
ChIP Hep-G2 ENCSR198BHH.ZNF550.Hep-G2 130 bp overlap
ZNF574 1 dataset
ChIP HepG2 ENCFF206MMY 361 bp overlap
ZNF687 1 dataset
ChIP HepG2 ENCFF653WIX 361 bp overlap
Huangfu Lab · Publications · Resources · Contact