chr1 : 172,479,765 172,480,400
635 bp 125 TFs 0 linked genes
This 635 bp open chromatin element has no linked target genes and is bound by 125 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:172,474,765 – 172,485,400
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
125 transcription factors
Source
Cell type
AR 17 datasets
ChIP LNCaP_1F5_SIFOXA1 GSE30623.AR.LNCaP_1F5_SIFOXA1 114 bp overlap
ChIP LNCaP_FOXA1 ERP003503.AR.LNCaP_FOXA1 169 bp overlap
ChIP LNCaP_SHFOXA1_R1881 GSE37345.AR.LNCaP_SHFOXA1_R1881 220 bp overlap
ChIP LTAD_siControl GSE94577.AR.LTAD_siControl 119 bp overlap
ChIP MCF-7 GSE48930.AR.MCF-7 211 bp overlap
ChIP VCaP_R1881_4H GSE84432.AR.VCaP_R1881_4H 145 bp overlap
ChIP prostate GSE56288.AR.prostate 240 bp overlap
ChIP prostate-cancer_PDX_81 GSE130408.AR.prostate-cancer_PDX_81 131 bp overlap
ChIP prostate_1730_T GSE130408.AR.prostate_1730_T 157 bp overlap
ChIP prostate_1816_T GSE130408.AR.prostate_1816_T 283 bp overlap
ChIP prostate_1853_T GSE130408.AR.prostate_1853_T 185 bp overlap
ChIP prostate_2752_T GSE130408.AR.prostate_2752_T 249 bp overlap
ChIP prostate_4024_T GSE130408.AR.prostate_4024_T 344 bp overlap
ChIP prostate_P1 GSE130408.AR.prostate_P1 201 bp overlap
ChIP prostate_P1_T GSE130408.AR.prostate_P1_T 193 bp overlap
ChIP prostate_P25 GSE130408.AR.prostate_P25 224 bp overlap
ChIP prostate_P27 GSE130408.AR.prostate_P27 238 bp overlap
ARNTL 1 dataset
ChIP U2OS_DMSO GSE85096.ARNTL.U2OS_DMSO 239 bp overlap
ATF4 2 datasets
ChIP K-562 ENCSR145TSJ.ATF4.K-562 252 bp overlap
ChIP K562 ENCFF674KTF 194 bp overlap
BRD3 1 dataset
ChIP K-562_iBET-BD2-IFNG GSE138084.BRD3.K-562_iBET-BD2-IFNG 176 bp overlap
BRD4 3 datasets
ChIP HEK293_Ctrl GSE129407.BRD4.HEK293_Ctrl 186 bp overlap
ChIP HEK293_sgNT GSE129407.BRD4.HEK293_sgNT 415 bp overlap
ChIP Jurkat GSE83777.BRD4.Jurkat 56 bp overlap
CC2D1A 2 datasets
ChIP K562 ENCFF567XUT 438 bp overlap
ChIP K562 ENCFF567XUT 443 bp overlap
CEBPB 10 datasets
Motif DE_12h DE_12h-CEBPB_MA0466.4 10 bp overlap
Motif DE_24h DE_24h-CEBPB_MA0466.4 10 bp overlap
Motif DE_48h DE_48h-CEBPB_MA0466.4 10 bp overlap
Motif ES_0h ES_0h-CEBPB_MA0466.4 10 bp overlap
ChIP K-562 ENCSR000EHE.CEBPB.K-562 198 bp overlap
ChIP K-562 ENCSR000BRQ.CEBPB.K-562 152 bp overlap
ChIP K562 ENCFF189VBN 108 bp overlap
ChIP K562 ENCFF194QGF 92 bp overlap
ChIP K562 ENCFF584CTB 382 bp overlap
ChIP K562 ENCFF584CTB 497 bp overlap
CEBPE 4 datasets
Motif DE_12h DE_12h-CEBPE_MA0837.3 10 bp overlap
Motif DE_24h DE_24h-CEBPE_MA0837.3 10 bp overlap
Motif DE_48h DE_48h-CEBPE_MA0837.3 10 bp overlap
Motif ES_0h ES_0h-CEBPE_MA0837.3 10 bp overlap
CEBPG 5 datasets
Motif DE_12h DE_12h-CEBPG_MA0838.1 10 bp overlap
Motif DE_24h DE_24h-CEBPG_MA0838.1 10 bp overlap
Motif DE_48h DE_48h-CEBPG_MA0838.1 10 bp overlap
Motif ES_0h ES_0h-CEBPG_MA0838.1 10 bp overlap
ChIP K562 ENCFF956TPS 195 bp overlap
CTCF 9 datasets
Motif DE_12h DE_12h-CTCF_MA1930.2 33 bp overlap
Motif DE_12h DE_12h-CTCF_MA1930.2 33 bp overlap
Motif DE_24h DE_24h-CTCF_MA1930.2 33 bp overlap
Motif ES_0h ES_0h-CTCF_MA1930.2 33 bp overlap
ChIP GM23338 ENCFF772DML 201 bp overlap
ChIP K-562_MonoC GSE137216.CTCF.K-562_MonoC 263 bp overlap
ChIP K-562_RF2-insertion GSE140868.CTCF.K-562_RF2-insertion 265 bp overlap
ChIP K-562_WT GSE140868.CTCF.K-562_WT 99 bp overlap
ChIP placenta ENCFF029PHY 445 bp overlap
CXXC5 1 dataset
ChIP K562 ENCFF497CZN 371 bp overlap
Cebpa 3 datasets
ChIP BLaER1 ENCFF262VBH 274 bp overlap
ChIP BLaER1 ENCFF274GAT 256 bp overlap
ChIP BLaER1 ENCFF896HSY 64 bp overlap
ELF3 2 datasets
ChIP PDAC GSE64557.ELF3.PDAC 108 bp overlap
ChIP PDAC_KOKLF5 GSE64557.ELF3.PDAC_KOKLF5 93 bp overlap
EWSR1-FLI1 2 datasets
Motif DE_12h DE_12h-EWSR1-FLI1_MA0149.1 18 bp overlap
Motif DE_12h DE_12h-EWSR1-FLI1_MA0149.1 18 bp overlap
Elf5 1 dataset
Motif DE_12h DE_12h-Elf5_MA0136.4 8 bp overlap
FEZF2 5 datasets
Motif DE_12h DE_12h-FEZF2_MA2341.1 8 bp overlap
Motif DE_12h DE_12h-FEZF2_MA2341.1 8 bp overlap
Motif DE_24h DE_24h-FEZF2_MA2341.1 8 bp overlap
Motif ES_0h ES_0h-FEZF2_MA2341.1 8 bp overlap
Motif ES_0h ES_0h-FEZF2_MA2341.1 8 bp overlap
FOXC1 1 dataset
Motif DE_12h DE_12h-FOXC1_MA0032.2 11 bp overlap
FOXC2 1 dataset
Motif DE_12h DE_12h-FOXC2_MA0846.2 11 bp overlap
FOXD2 1 dataset
Motif DE_12h DE_12h-FOXD2_MA0847.4 11 bp overlap
FOXD3 2 datasets
Motif DE_12h DE_12h-FOXD3_MA0041.3 14 bp overlap
Motif DE_12h DE_12h-FOXD3_MA0041.3 14 bp overlap
FOXE1 2 datasets
Motif DE_12h DE_12h-FOXE1_MA1487.3 12 bp overlap
Motif DE_12h DE_12h-FOXE1_MA1487.3 12 bp overlap
FOXH1 1 dataset
Motif DE_12h DE_12h-FOXH1_MA0479.2 8 bp overlap
FOXP2 1 dataset
Motif DE_12h DE_12h-FOXP2_MA0593.2 9 bp overlap
GATA2 1 dataset
ChIP ME-1_CBFB-MYH11-KD GSE117138.GATA2.ME-1_CBFB-MYH11-KD 105 bp overlap
GFI1 4 datasets
Motif DE_12h DE_12h-GFI1_MA0038.3 11 bp overlap
Motif DE_24h DE_24h-GFI1_MA0038.3 11 bp overlap
Motif DE_48h DE_48h-GFI1_MA0038.3 11 bp overlap
Motif ES_0h ES_0h-GFI1_MA0038.3 11 bp overlap
HDAC3 1 dataset
ChIP RH4_DMSO-6H GSE116344.HDAC3.RH4_DMSO-6H 308 bp overlap
HNF4A 1 dataset
ChIP GP5D GSE51234.HNF4A.GP5D 173 bp overlap
HOXB8 1 dataset
ChIP CFPAC-1_HOXB8-OE GSE119930.HOXB8.CFPAC-1_HOXB8-OE 76 bp overlap
Hmga1 1 dataset
Motif DE_12h DE_12h-Hmga1_MA2124.1 8 bp overlap
IKZF1 1 dataset
ChIP pre-B-cell GSE107886.IKZF1.pre-B-cell 63 bp overlap
IKZF2 3 datasets
Motif DE_12h DE_12h-IKZF2_MA2326.1 6 bp overlap
Motif DE_12h DE_12h-IKZF2_MA2326.1 6 bp overlap
Motif DE_12h DE_12h-IKZF2_MA2326.1 6 bp overlap
IRF3 1 dataset
Motif DE_12h DE_12h-IRF3_MA1418.2 17 bp overlap
IRF9 1 dataset
ChIP K562 ENCFF346PQL 341 bp overlap
Ikzf3 1 dataset
Motif DE_12h DE_12h-Ikzf3_MA1992.2 9 bp overlap
KLF1 1 dataset
Motif DE_12h DE_12h-KLF1_MA0493.3 8 bp overlap
KLF10 1 dataset
Motif DE_12h DE_12h-KLF10_MA1511.2 9 bp overlap
KLF11 1 dataset
Motif DE_12h DE_12h-KLF11_MA1512.2 10 bp overlap
KLF12 1 dataset
Motif DE_12h DE_12h-KLF12_MA0742.2 9 bp overlap
KLF14 1 dataset
Motif DE_12h DE_12h-KLF14_MA0740.2 9 bp overlap
KLF15 1 dataset
Motif DE_12h DE_12h-KLF15_MA1513.2 8 bp overlap
KLF2 1 dataset
Motif DE_12h DE_12h-KLF2_MA1515.2 8 bp overlap
KLF4 1 dataset
Motif DE_12h DE_12h-KLF4_MA0039.5 8 bp overlap
KLF5 1 dataset
Motif DE_12h DE_12h-KLF5_MA0599.1 10 bp overlap
KLF7 1 dataset
Motif DE_12h DE_12h-KLF7_MA1959.2 8 bp overlap
Lef1 1 dataset
Motif DE_12h DE_12h-Lef1_MA0768.3 8 bp overlap
MAF 1 dataset
Motif DE_12h DE_12h-MAF_MA1520.2 13 bp overlap
MAFF 1 dataset
Motif DE_12h DE_12h-MAFF_MA0495.4 11 bp overlap
MAFK 3 datasets
Motif DE_12h DE_12h-MAFK_MA0496.4 10 bp overlap
Motif DE_48h DE_48h-MAFK_MA0496.4 10 bp overlap
Motif ES_0h ES_0h-MAFK_MA0496.4 10 bp overlap
MAZ 3 datasets
Motif DE_12h DE_12h-MAZ_MA1522.2 8 bp overlap
ChIP K562 ENCFF809XHP 322 bp overlap
ChIP K562 ENCFF809XHP 524 bp overlap
MEF2A 1 dataset
Motif DE_12h DE_12h-MEF2A_MA0052.5 10 bp overlap
MEF2B 1 dataset
Motif DE_12h DE_12h-MEF2B_MA0660.1 12 bp overlap
MEF2C 1 dataset
Motif DE_12h DE_12h-MEF2C_MA0497.2 11 bp overlap
MEF2D 1 dataset
Motif DE_12h DE_12h-MEF2D_MA0773.1 12 bp overlap
MYB 1 dataset
ChIP Loucy GSE94000.MYB.Loucy 65 bp overlap
Mafb 1 dataset
Motif DE_12h DE_12h-Mafb_MA0117.3 11 bp overlap
NFIB 4 datasets
Motif DE_12h DE_12h-NFIB_MA1643.2 17 bp overlap
Motif DE_24h DE_24h-NFIB_MA1643.2 17 bp overlap
Motif DE_48h DE_48h-NFIB_MA1643.2 17 bp overlap
Motif ES_0h ES_0h-NFIB_MA1643.2 17 bp overlap
NFKB1 1 dataset
Motif DE_12h DE_12h-NFKB1_MA0105.4 13 bp overlap
NFKB2 1 dataset
Motif DE_12h DE_12h-NFKB2_MA0778.2 11 bp overlap
NIPBL 1 dataset
ChIP GP5D GSE51234.NIPBL.GP5D 166 bp overlap
NKX2-1 1 dataset
ChIP NCI-H1819 GSE39998.NKX2-1.NCI-H1819 161 bp overlap
NOTCH3 1 dataset
ChIP TALL-1_GSI GSE104261.NOTCH3.TALL-1_GSI 208 bp overlap
NRF1 3 datasets
ChIP K562 ENCFF689EWI 473 bp overlap
ChIP K562 ENCFF791UHF 440 bp overlap
ChIP K562 ENCFF791UHF 554 bp overlap
NRL 1 dataset
Motif DE_12h DE_12h-NRL_MA0842.3 12 bp overlap
OGG1 1 dataset
ChIP HEK293 GSE89017.OGG1.HEK293 224 bp overlap
ONECUT3 1 dataset
Motif DE_12h DE_12h-ONECUT3_MA0757.2 12 bp overlap
PATZ1 1 dataset
Motif DE_12h DE_12h-PATZ1_MA1961.2 11 bp overlap
PAX5 1 dataset
ChIP NALM-6 GSE126300.PAX5.NALM-6 150 bp overlap
POLR2A 5 datasets
ChIP esophagus muscularis mucosa ENCFF432ZCY 313 bp overlap
ChIP esophagus muscularis mucosa ENCFF759BBR 159 bp overlap
ChIP prostate gland ENCFF881OMH 197 bp overlap
ChIP sigmoid colon ENCFF748YVT 321 bp overlap
ChIP sigmoid colon ENCFF754JQR 277 bp overlap
POU5F1 1 dataset
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 229 bp overlap
PRDM9 2 datasets
Motif DE_12h DE_12h-PRDM9_MA1723.2 20 bp overlap
Motif DE_12h DE_12h-PRDM9_MA1723.2 20 bp overlap
PTBP1 1 dataset
ChIP Hep-G2 ENCSR156APP.PTBP1.Hep-G2 170 bp overlap
Prdm14 1 dataset
Motif DE_12h DE_12h-Prdm14_MA1998.2 8 bp overlap
Prdm5 1 dataset
Motif DE_12h DE_12h-Prdm5_MA1999.2 11 bp overlap
RAD21 3 datasets
ChIP GP5D GSE51234.RAD21.GP5D 303 bp overlap
ChIP K-562_RF2-insertion GSE140868.RAD21.K-562_RF2-insertion 152 bp overlap
ChIP K562 ENCFF634XYR 365 bp overlap
RBM39 1 dataset
ChIP K-562 GSE120104.RBM39.K-562 158 bp overlap
REST 4 datasets
Motif DE_12h DE_12h-REST_MA0138.3 20 bp overlap
Motif DE_24h DE_24h-REST_MA0138.3 20 bp overlap
Motif DE_48h DE_48h-REST_MA0138.3 20 bp overlap
Motif ES_0h ES_0h-REST_MA0138.3 20 bp overlap
RORA 1 dataset
Motif DE_12h DE_12h-RORA_MA0072.2 11 bp overlap
RORB 1 dataset
Motif DE_12h DE_12h-RORB_MA1150.2 10 bp overlap
RORC 1 dataset
Motif DE_12h DE_12h-RORC_MA1151.2 10 bp overlap
RREB1 1 dataset
Motif DE_12h DE_12h-RREB1_MA0073.2 19 bp overlap
SIRT6 1 dataset
ChIP K-562 ENCSR000AUB.SIRT6.K-562 212 bp overlap
SIX1 1 dataset
Motif DE_12h DE_12h-SIX1_MA1118.2 9 bp overlap
SIX2 1 dataset
Motif DE_12h DE_12h-SIX2_MA1119.2 11 bp overlap
SMAD4 1 dataset
ChIP K562 ENCFF628RBP 384 bp overlap
SNAI2 1 dataset
ChIP SMS-CTR_D48 GSE137168.SNAI2.SMS-CTR_D48 229 bp overlap
SP2 1 dataset
Motif DE_12h DE_12h-SP2_MA0516.3 9 bp overlap
SP3 1 dataset
Motif DE_12h DE_12h-SP3_MA0746.3 11 bp overlap
SP4 1 dataset
Motif DE_12h DE_12h-SP4_MA0685.2 9 bp overlap
SP5 4 datasets
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
Motif DE_24h DE_24h-SP5_MA1965.2 6 bp overlap
Motif DE_48h DE_48h-SP5_MA1965.2 6 bp overlap
Motif ES_0h ES_0h-SP5_MA1965.2 6 bp overlap
SP9 1 dataset
Motif DE_12h DE_12h-SP9_MA1564.2 10 bp overlap
STAT3 1 dataset
ChIP MDA-MB-468_EtOH GSE85579.STAT3.MDA-MB-468_EtOH 53 bp overlap
Sox6 2 datasets
Motif DE_12h DE_12h-Sox6_MA0515.1 10 bp overlap
Motif DE_12h DE_12h-Sox6_MA0515.1 10 bp overlap
Spz1 1 dataset
Motif DE_12h DE_12h-Spz1_MA0111.1 11 bp overlap
Stat2 2 datasets
Motif DE_12h DE_12h-Stat2_MA1623.2 10 bp overlap
Motif DE_12h DE_12h-Stat2_MA1623.2 10 bp overlap
TAF1 1 dataset
ChIP WA01 ENCSR000BHO.TAF1.WA01 199 bp overlap
TAF7 1 dataset
ChIP K-562 ENCSR671GFC.TAF7.K-562 216 bp overlap
TBP 1 dataset
ChIP K-562 GSE55306.TBP.K-562 210 bp overlap
TBX1 1 dataset
Motif DE_12h DE_12h-TBX1_MA0805.1 8 bp overlap
TFAP2C 3 datasets
Motif DE_12h DE_12h-TFAP2C_MA0814.3 9 bp overlap
Motif DE_48h DE_48h-TFAP2C_MA0814.3 9 bp overlap
Motif ES_0h ES_0h-TFAP2C_MA0814.3 9 bp overlap
TFE3 1 dataset
ChIP K562 ENCFF697ABG 167 bp overlap
TRIM28 1 dataset
ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 281 bp overlap
ZBTB33 2 datasets
ChIP K-562 ENCSR876GXA.ZBTB33.K-562 355 bp overlap
ChIP K562 ENCFF875HLX 259 bp overlap
ZBTB6 5 datasets
Motif DE_12h DE_12h-ZBTB6_MA1581.2 9 bp overlap
Motif DE_24h DE_24h-ZBTB6_MA1581.2 9 bp overlap
Motif DE_48h DE_48h-ZBTB6_MA1581.2 9 bp overlap
Motif ES_0h ES_0h-ZBTB6_MA1581.2 9 bp overlap
ChIP HEK293 GSE76494.ZBTB6.HEK293 213 bp overlap
ZEB2 1 dataset
ChIP K562 ENCFF975RXS 461 bp overlap
ZNF135 6 datasets
Motif DE_12h DE_12h-ZNF135_MA1587.1 14 bp overlap
Motif DE_12h DE_12h-ZNF135_MA1587.1 14 bp overlap
Motif DE_24h DE_24h-ZNF135_MA1587.1 14 bp overlap
Motif DE_48h DE_48h-ZNF135_MA1587.1 14 bp overlap
Motif ES_0h ES_0h-ZNF135_MA1587.1 14 bp overlap
Motif ES_0h ES_0h-ZNF135_MA1587.1 14 bp overlap
ZNF136 1 dataset
Motif DE_12h DE_12h-ZNF136_MA1588.1 15 bp overlap
ZNF148 2 datasets
Motif DE_12h DE_12h-ZNF148_MA1653.2 10 bp overlap
Motif DE_12h DE_12h-ZNF148_MA1653.2 10 bp overlap
ZNF213 3 datasets
Motif DE_12h DE_12h-ZNF213_MA2121.1 12 bp overlap
Motif DE_24h DE_24h-ZNF213_MA2121.1 12 bp overlap
Motif ES_0h ES_0h-ZNF213_MA2121.1 12 bp overlap
ZNF24 1 dataset
Motif DE_12h DE_12h-ZNF24_MA1124.1 13 bp overlap
ZNF257 3 datasets
Motif DE_12h DE_12h-ZNF257_MA1710.2 10 bp overlap
Motif DE_48h DE_48h-ZNF257_MA1710.2 10 bp overlap
Motif ES_0h ES_0h-ZNF257_MA1710.2 10 bp overlap
ZNF354A 2 datasets
Motif DE_12h DE_12h-ZNF354A_MA1978.2 20 bp overlap
Motif DE_12h DE_12h-ZNF354A_MA1978.2 20 bp overlap
ZNF384 4 datasets
Motif DE_12h DE_12h-ZNF384_MA1125.2 8 bp overlap
Motif DE_12h DE_12h-ZNF384_MA1125.2 8 bp overlap
Motif DE_12h DE_12h-ZNF384_MA1125.2 8 bp overlap
ChIP K-562 ENCSR000EFP.ZNF384.K-562 143 bp overlap
ZNF460 6 datasets
Motif DE_12h DE_12h-ZNF460_MA1596.1 16 bp overlap
Motif DE_12h DE_12h-ZNF460_MA1596.1 16 bp overlap
Motif DE_24h DE_24h-ZNF460_MA1596.1 16 bp overlap
Motif DE_48h DE_48h-ZNF460_MA1596.1 16 bp overlap
Motif ES_0h ES_0h-ZNF460_MA1596.1 16 bp overlap
Motif ES_0h ES_0h-ZNF460_MA1596.1 16 bp overlap
ZNF680 1 dataset
Motif DE_12h DE_12h-ZNF680_MA1729.2 11 bp overlap
ZNF770 2 datasets
Motif DE_12h DE_12h-ZNF770_MA2099.1 8 bp overlap
Motif ES_0h ES_0h-ZNF770_MA2099.1 8 bp overlap
ZSCAN16 1 dataset
Motif DE_12h DE_12h-ZSCAN16_MA2100.1 18 bp overlap
ZSCAN29 1 dataset
ChIP K562 ENCFF797SOU 359 bp overlap
Zfp335 2 datasets
Motif DE_12h DE_12h-Zfp335_MA2002.2 7 bp overlap
Motif DE_12h DE_12h-Zfp335_MA2002.2 7 bp overlap