chr7 : 137,840,324 – 137,840,709
385 bp 129 TFs 2 linked genes
This 385 bp open chromatin element is linked to ENSG00000289438 and DGKI and is bound by 129 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ENSG00000289438 6.2 kb Proximal Proximity
DGKI 6.4 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr7:137,835,324 – 137,845,709
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
129 transcription factors
Source
Cell type
ARID3A 1 dataset
ChIP Hep-G2 ENCSR000EDP.ARID3A.Hep-G2 138 bp overlap
ASCL1 1 dataset
Motif DE_12h DE_12h-ASCL1_MA1100.3 8 bp overlap
ASH2L 1 dataset
ChIP VCaP GSE60841.ASH2L.VCaP 195 bp overlap
ATF3 2 datasets
ChIP liver ENCFF375GID 372 bp overlap
ChIP liver ENCSR480LIS.ATF3.liver 204 bp overlap
ATF7 1 dataset
ChIP GM12878 ENCSR014YCR.ATF7.GM12878 269 bp overlap
Ascl2 1 dataset
Motif DE_12h DE_12h-Ascl2_MA0816.1 10 bp overlap
BCOR 1 dataset
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 209 bp overlap
BHLHE22 1 dataset
Motif DE_12h DE_12h-BHLHE22_MA1635.2 6 bp overlap
BRD4 2 datasets
ChIP NCI-H1963 GSE145028.BRD4.NCI-H1963 205 bp overlap
ChIP SGBS_TNF GSE64233.BRD4.SGBS_TNF 345 bp overlap
Bhlha15 1 dataset
Motif DE_12h DE_12h-Bhlha15_MA1472.3 8 bp overlap
CEBPA 1 dataset
ChIP liver ERP002306.CEBPA.liver 94 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 352 bp overlap
EGR1 2 datasets
ChIP liver ENCFF130MBW 314 bp overlap
ChIP liver ENCSR736BUG.EGR1.liver 233 bp overlap
ELF1 1 dataset
ChIP GM12878 ENCFF692SMY 152 bp overlap
ELF2 1 dataset
Motif DE_12h DE_12h-ELF2_MA1483.3 10 bp overlap
ELK1::HOXB13 1 dataset
Motif DE_12h DE_12h-ELK1HOXB13_MA1932.2 15 bp overlap
ERF 1 dataset
Motif DE_12h DE_12h-ERF_MA0760.2 9 bp overlap
ERF::FOXI1 1 dataset
Motif DE_12h DE_12h-ERFFOXI1_MA1935.2 10 bp overlap
ERF::FOXO1 2 datasets
Motif DE_12h DE_12h-ERFFOXO1_MA1936.2 12 bp overlap
Motif DE_12h DE_12h-ERFFOXO1_MA1936.2 12 bp overlap
ERF::HOXB13 1 dataset
Motif DE_12h DE_12h-ERFHOXB13_MA1937.2 13 bp overlap
ERG 9 datasets
ChIP VCaP GSE28950.ERG.VCaP 179 bp overlap
ChIP VCaP_DHAT_18H GSE28950.ERG.VCaP_DHAT_18H 181 bp overlap
ChIP VCaP_DHAT_2H GSE28950.ERG.VCaP_DHAT_2H 179 bp overlap
ChIP VCaP_DHT GSE79128.ERG.VCaP_DHT 208 bp overlap
ChIP VCaP_ETOH GSE49091.ERG.VCaP_ETOH 150 bp overlap
ChIP VCaP_SH1_DHT GSE79128.ERG.VCaP_SH1_DHT 168 bp overlap
ChIP VCaP_SH2_DHT GSE79128.ERG.VCaP_SH2_DHT 170 bp overlap
ChIP VCaP_shARID1A GSE110655.ERG.VCaP_shARID1A 150 bp overlap
ChIP VCaP_shERG GSE110655.ERG.VCaP_shERG 161 bp overlap
ETS1 1 dataset
Motif DE_12h DE_12h-ETS1_MA0098.4 9 bp overlap
ETS2 1 dataset
Motif DE_12h DE_12h-ETS2_MA1484.2 9 bp overlap
ETV1 1 dataset
Motif DE_12h DE_12h-ETV1_MA0761.3 9 bp overlap
ETV2 1 dataset
Motif DE_12h DE_12h-ETV2_MA0762.2 9 bp overlap
ETV2::FOXI1 1 dataset
Motif DE_12h DE_12h-ETV2FOXI1_MA1942.2 11 bp overlap
ETV5::FOXI1 2 datasets
Motif DE_12h DE_12h-ETV5FOXI1_MA1946.2 12 bp overlap
Motif DE_12h DE_12h-ETV5FOXI1_MA1946.2 12 bp overlap
ETV5::FOXO1 2 datasets
Motif DE_12h DE_12h-ETV5FOXO1_MA1947.2 10 bp overlap
Motif DE_12h DE_12h-ETV5FOXO1_MA1947.2 10 bp overlap
Erg 1 dataset
Motif DE_12h DE_12h-Erg_MA0474.4 10 bp overlap
FEZF2 1 dataset
Motif DE_12h DE_12h-FEZF2_MA2341.1 8 bp overlap
FLI1::DRGX 1 dataset
Motif DE_12h DE_12h-FLI1DRGX_MA1949.2 14 bp overlap
FLI1::FOXI1 1 dataset
Motif DE_12h DE_12h-FLI1FOXI1_MA1950.2 11 bp overlap
FOXA1 17 datasets
ChIP 22Rv1 GSE96652.FOXA1.22Rv1 199 bp overlap
Motif DE_12h DE_12h-FOXA1_MA0148.5 8 bp overlap
ChIP HepG2 ENCFF207NVJ 281 bp overlap
ChIP HepG2 ENCFF207NVJ 181 bp overlap
ChIP LAPC-4_TFS_p358fs-V5 GSE123618.FOXA1.LAPC-4_TFS_p358fs-V5 86 bp overlap
ChIP LNCaP_ETOH24H GSE58428.FOXA1.LNCaP_ETOH24H 142 bp overlap
ChIP LNCaP_SHFOXA1_R1881 GSE37345.FOXA1.LNCaP_SHFOXA1_R1881 83 bp overlap
ChIP T-47D_shRNF2 GSE137579.FOXA1.T-47D_shRNF2 94 bp overlap
ChIP VCaP_DHT24H GSE58428.FOXA1.VCaP_DHT24H 385 bp overlap
ChIP VCaP_ETOH24H GSE58428.FOXA1.VCaP_ETOH24H 279 bp overlap
ChIP liver ENCFF537QZV 385 bp overlap
ChIP liver ENCFF537QZV 185 bp overlap
ChIP liver ERP002306.FOXA1.liver 385 bp overlap
ChIP liver ENCSR324RCI.FOXA1.liver 385 bp overlap
ChIP liver ENCSR735KEY.FOXA1.liver 268 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 233 bp overlap
ChIP primary-prostate-cancer_G2_DSG GSE114737.FOXA1.primary-prostate-cancer_G2_DSG 77 bp overlap
FOXA2 5 datasets
Motif DE_12h DE_12h-FOXA2_MA0047.4 8 bp overlap
ChIP liver ENCSR310NYI.FOXA2.liver 385 bp overlap
ChIP liver ENCSR080XEY.FOXA2.liver 344 bp overlap
ChIP liver_CARN1618 ERP008682.FOXA2.liver_CARN1618 385 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 317 bp overlap
FOXA3 1 dataset
Motif DE_12h DE_12h-FOXA3_MA1683.2 7 bp overlap
FOXD1 1 dataset
Motif DE_12h DE_12h-FOXD1_MA0031.2 7 bp overlap
FOXD2 1 dataset
Motif DE_12h DE_12h-FOXD2_MA0847.4 11 bp overlap
FOXG1 1 dataset
Motif DE_12h DE_12h-FOXG1_MA0613.1 8 bp overlap
FOXI1 1 dataset
Motif DE_12h DE_12h-FOXI1_MA0042.2 7 bp overlap
FOXJ2::ELF1 1 dataset
Motif DE_12h DE_12h-FOXJ2ELF1_MA1952.2 11 bp overlap
FOXK1 1 dataset
Motif DE_12h DE_12h-FOXK1_MA0852.3 7 bp overlap
FOXK2 1 dataset
Motif DE_12h DE_12h-FOXK2_MA1103.3 7 bp overlap
FOXL1 1 dataset
Motif DE_12h DE_12h-FOXL1_MA0033.2 7 bp overlap
FOXO1::ELF1 1 dataset
Motif DE_12h DE_12h-FOXO1ELF1_MA1953.2 13 bp overlap
FOXO1::ELK1 1 dataset
Motif DE_12h DE_12h-FOXO1ELK1_MA1954.2 13 bp overlap
FOXO1::ELK3 2 datasets
Motif DE_12h DE_12h-FOXO1ELK3_MA1955.2 13 bp overlap
Motif DE_12h DE_12h-FOXO1ELK3_MA1955.2 13 bp overlap
FOXO1::FLI1 2 datasets
Motif DE_12h DE_12h-FOXO1FLI1_MA1956.2 13 bp overlap
Motif DE_12h DE_12h-FOXO1FLI1_MA1956.2 13 bp overlap
FOXO4 1 dataset
Motif DE_12h DE_12h-FOXO4_MA0848.1 7 bp overlap
FOXO6 1 dataset
Motif DE_12h DE_12h-FOXO6_MA0849.1 7 bp overlap
FOXP1 1 dataset
Motif DE_12h DE_12h-FOXP1_MA0481.4 7 bp overlap
FOXP2 1 dataset
Motif DE_12h DE_12h-FOXP2_MA0593.2 9 bp overlap
FOXP3 1 dataset
Motif DE_12h DE_12h-FOXP3_MA0850.1 7 bp overlap
FOXP4 2 datasets
Motif DE_12h DE_12h-FOXP4_MA2117.1 7 bp overlap
ChIP WTC11 ENCFF708TAF 258 bp overlap
FOXS1 1 dataset
Motif DE_12h DE_12h-FOXS1_MA2118.1 8 bp overlap
Foxf1 1 dataset
Motif DE_12h DE_12h-Foxf1_MA1606.2 7 bp overlap
Foxj2 1 dataset
Motif DE_12h DE_12h-Foxj2_MA0614.1 8 bp overlap
Foxj3 1 dataset
Motif DE_12h DE_12h-Foxj3_MA0851.2 9 bp overlap
Foxl2 1 dataset
Motif DE_12h DE_12h-Foxl2_MA1607.2 10 bp overlap
Foxo1 1 dataset
Motif DE_12h DE_12h-Foxo1_MA0480.3 7 bp overlap
Foxo3 1 dataset
Motif DE_12h DE_12h-Foxo3_MA0157.4 7 bp overlap
Foxq1 1 dataset
Motif DE_12h DE_12h-Foxq1_MA0040.2 10 bp overlap
GABPA 5 datasets
Motif DE_12h DE_12h-GABPA_MA0062.4 10 bp overlap
ChIP VCaP_ETOH GSE49091.GABPA.VCaP_ETOH 129 bp overlap
ChIP VCaP_R1881 GSE49091.GABPA.VCaP_R1881 172 bp overlap
ChIP liver ENCFF500III 385 bp overlap
ChIP liver ENCSR038GMB.GABPA.liver 205 bp overlap
GCM1 1 dataset
Motif DE_12h DE_12h-GCM1_MA0646.2 10 bp overlap
HNF4A 4 datasets
ChIP Hep-G2 ENCSR000BLF.HNF4A.Hep-G2 164 bp overlap
ChIP liver ENCFF354NRH 249 bp overlap
ChIP liver ENCFF449HPV 221 bp overlap
ChIP liver ERP002306.HNF4A.liver 176 bp overlap
HNF4G 1 dataset
ChIP liver ENCSR297GII.HNF4G.liver 177 bp overlap
HOXB13 1 dataset
ChIP prostate_P29_T GSE130408.HOXB13.prostate_P29_T 183 bp overlap
HOXB2::ELK1 1 dataset
Motif DE_12h DE_12h-HOXB2ELK1_MA1957.1 14 bp overlap
HOXD12::ELK1 1 dataset
Motif DE_12h DE_12h-HOXD12ELK1_MA1958.2 13 bp overlap
IKZF1 2 datasets
Motif DE_12h DE_12h-IKZF1_MA1508.2 8 bp overlap
ChIP GM12878 ENCFF753XDO 385 bp overlap
IKZF2 1 dataset
Motif DE_12h DE_12h-IKZF2_MA2326.1 6 bp overlap
Ikzf3 1 dataset
Motif DE_12h DE_12h-Ikzf3_MA1992.2 9 bp overlap
JUND 3 datasets
ChIP liver ENCFF007WWT 318 bp overlap
ChIP liver ENCSR837GTK.JUND.liver 282 bp overlap
ChIP liver ENCSR196HGZ.JUND.liver 200 bp overlap
KDM1A 1 dataset
ChIP pancreatic-progenitor_PP2-KDM1A-inh GSE104840.KDM1A.pancreatic-progenitor_PP2-KDM1A-inh 230 bp overlap
MAX 1 dataset
ChIP liver ENCSR521IID.MAX.liver 266 bp overlap
MED1 2 datasets
ChIP SGBS GSE64233.MED1.SGBS 229 bp overlap
ChIP SGBS_TNF GSE64233.MED1.SGBS_TNF 219 bp overlap
MEIS1 1 dataset
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
MLLT1 1 dataset
ChIP GM12878 ENCSR552XSN.MLLT1.GM12878 217 bp overlap
MTA2 1 dataset
ChIP GM12878 ENCSR293QAR.MTA2.GM12878 245 bp overlap
MYF5 1 dataset
Motif DE_12h DE_12h-MYF5_MA1641.2 8 bp overlap
MYOD1 1 dataset
Motif DE_12h DE_12h-MYOD1_MA0499.3 9 bp overlap
MYOG 1 dataset
Motif DE_12h DE_12h-MYOG_MA0500.3 8 bp overlap
NANOG 5 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 385 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 321 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 385 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 379 bp overlap
ChIP hESC GSE18292.NANOG.hESC 96 bp overlap
NHLH1 1 dataset
Motif DE_12h DE_12h-NHLH1_MA0048.3 9 bp overlap
NIPBL 1 dataset
ChIP hESC_WNT3A_ACTIVIN GSE64758.NIPBL.hESC_WNT3A_ACTIVIN 212 bp overlap
NR2F2 2 datasets
ChIP liver ENCSR168SMX.NR2F2.liver 154 bp overlap
ChIP liver ENCSR338MMB.NR2F2.liver 119 bp overlap
Neurod2 1 dataset
Motif DE_12h DE_12h-Neurod2_MA1993.2 6 bp overlap
ONECUT1 5 datasets
ChIP H9 ERP004206.ONECUT1.H9 289 bp overlap
ChIP Hep-G2 ENCSR956OSX.ONECUT1.Hep-G2 238 bp overlap
ChIP HepG2 ENCFF243FIR 340 bp overlap
ChIP liver ERP002306.ONECUT1.liver 244 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.ONECUT1.pancreatic-progenitor_PP1 385 bp overlap
Olig2 1 dataset
Motif DE_12h DE_12h-Olig2_MA1997.2 6 bp overlap
PDX1 2 datasets
ChIP hiPSC GSE125768.PDX1.hiPSC 265 bp overlap
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 178 bp overlap
POU3F3 1 dataset
Motif DE_12h DE_12h-POU3F3_MA0788.1 13 bp overlap
POU5F1 3 datasets
ChIP HUES-8 GSE109524.POU5F1.HUES-8 385 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 274 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 115 bp overlap
PPARG 3 datasets
ChIP ASC GSE21366.PPARG.ASC 106 bp overlap
ChIP Hep-G2 ENCSR130VQL.PPARG.Hep-G2 119 bp overlap
ChIP SGBS GSE41629.PPARG.SGBS 175 bp overlap
Ptf1A 1 dataset
Motif DE_12h DE_12h-Ptf1A_MA1619.2 8 bp overlap
RAD21 1 dataset
ChIP liver ENCFF485PAC 327 bp overlap
RELA 1 dataset
ChIP SGBS GSE64233.RELA.SGBS 81 bp overlap
REST 2 datasets
ChIP liver ENCSR867WPH.REST.liver 307 bp overlap
ChIP liver ENCSR893QWP.REST.liver 267 bp overlap
RXRA 3 datasets
ChIP Hep-G2 ENCSR000BHU.RXRA.Hep-G2 177 bp overlap
ChIP liver ENCFF077DAP 73 bp overlap
ChIP liver ENCFF807CIA 252 bp overlap
Rhox11 1 dataset
Motif DE_12h DE_12h-Rhox11_MA0629.2 9 bp overlap
SMAD3 1 dataset
ChIP BG03 GSE36578.SMAD3.BG03 93 bp overlap
SMARCA4 5 datasets
ChIP NPC_siCT GSE122631.SMARCA4.NPC_siCT 146 bp overlap
ChIP NPC_siSOX GSE122631.SMARCA4.NPC_siSOX 183 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 234 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 385 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 311 bp overlap
SMARCB1 1 dataset
ChIP hiPSC GSE124903.SMARCB1.hiPSC 385 bp overlap
SMARCC1 2 datasets
ChIP hiPSC GSE124903.SMARCC1.hiPSC 377 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 236 bp overlap
SOX2 3 datasets
ChIP HNSC GSE69479.SOX2.HNSC 201 bp overlap
ChIP RENVM GSE49404.SOX2.RENVM 172 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 363 bp overlap
SOX21 1 dataset
ChIP neuroepithelilal-cells GSE110505.SOX21.neuroepithelilal-cells 286 bp overlap
SOX6 1 dataset
ChIP Hep-G2 ENCSR766TSU.SOX6.Hep-G2 154 bp overlap
SP1 4 datasets
ChIP liver ENCFF597LFJ 264 bp overlap
ChIP liver ENCFF597LFJ 343 bp overlap
ChIP liver ENCFF769YSM 126 bp overlap
ChIP liver ENCFF769YSM 385 bp overlap
SPIC 1 dataset
Motif DE_12h DE_12h-SPIC_MA0687.2 13 bp overlap
SUZ12 1 dataset
ChIP Aska-SS GSE108025.SUZ12.Aska-SS 76 bp overlap
Spi1 1 dataset
Motif DE_12h DE_12h-Spi1_MA0080.7 13 bp overlap
Stat2 1 dataset
Motif DE_12h DE_12h-Stat2_MA1623.2 10 bp overlap
TCF3 1 dataset
ChIP NPC GSE154479.TCF3.NPC 298 bp overlap
TEAD1 1 dataset
ChIP pancreas_12D ERP008682.TEAD1.pancreas_12D 150 bp overlap
TEAD4 2 datasets
ChIP ESC S26-ESC-d0-TEAD4-exp1 244 bp overlap
ChIP H1 ENCFF778PAX 183 bp overlap
TFAP4::FLI1 1 dataset
Motif DE_12h DE_12h-TFAP4FLI1_MA1967.2 14 bp overlap
Tcf12 1 dataset
Motif DE_12h DE_12h-Tcf12_MA0521.3 6 bp overlap
Twist2 1 dataset
Motif DE_12h DE_12h-Twist2_MA0633.3 6 bp overlap
YY1 3 datasets
ChIP WA01 ENCSR000BKD.YY1.WA01 148 bp overlap
ChIP liver ENCFF400MBC 372 bp overlap
ChIP liver ENCFF400MBC 385 bp overlap
ZBTB18 1 dataset
Motif DE_12h DE_12h-ZBTB18_MA0698.2 11 bp overlap
ZBTB33 2 datasets
ChIP liver ENCFF592BJA 375 bp overlap
ChIP liver ENCSR516HUP.ZBTB33.liver 198 bp overlap
ZFP42 1 dataset
Motif DE_12h DE_12h-ZFP42_MA1651.2 13 bp overlap
ZIM3 1 dataset
Motif DE_12h DE_12h-ZIM3_MA1709.2 11 bp overlap
ZNF143 1 dataset
ChIP Hep-G2 ENCSR101FJT.ZNF143.Hep-G2 111 bp overlap
ZNF175 1 dataset
Motif DE_12h DE_12h-ZNF175_MA2332.1 9 bp overlap
ZNF354A 1 dataset
Motif DE_12h DE_12h-ZNF354A_MA1978.2 20 bp overlap
ZNF418 1 dataset
Motif DE_12h DE_12h-ZNF418_MA1980.1 15 bp overlap
ZNF530 1 dataset
Motif DE_12h DE_12h-ZNF530_MA1981.2 14 bp overlap
ZNF582 1 dataset
Motif DE_12h DE_12h-ZNF582_MA1983.2 19 bp overlap
ZNF766 1 dataset
ChIP HEK293T GSE78099.ZNF766.HEK293T 163 bp overlap
ZNF770 1 dataset
Motif DE_12h DE_12h-ZNF770_MA2099.1 8 bp overlap
Huangfu Lab · Publications · Resources · Contact