chr5 : 104,355,387 104,355,674
287 bp 117 TFs 0 linked genes
This 287 bp open chromatin element has no linked target genes and is bound by 117 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:104,350,387 – 104,360,674
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
117 transcription factors
Source
Cell type
AR 1 dataset
ChIP DU145_FOXA1_ARQ6540X GSE47987.AR.DU145_FOXA1_ARQ6540X 223 bp overlap
ARID5B 1 dataset
ChIP HepG2 ENCFF964FWK 287 bp overlap
ARNT 1 dataset
ChIP SK-MEL-28 GSE85352.ARNT.SK-MEL-28 192 bp overlap
ASH2L 1 dataset
ChIP Hep-G2 ENCSR508LMH.ASH2L.Hep-G2 287 bp overlap
BARX1 1 dataset
Motif DE_12h DE_12h-BARX1_MA0875.2 6 bp overlap
BCL6 1 dataset
ChIP OCI-Ly1 GSE29282.BCL6.OCI-Ly1 166 bp overlap
BRD4 1 dataset
ChIP SW480 GSE73319.BRD4.SW480 98 bp overlap
BSX 1 dataset
Motif DE_12h DE_12h-BSX_MA0876.2 6 bp overlap
CDX2 1 dataset
ChIP Caco-2_DIFF GSE23436.CDX2.Caco-2_DIFF 179 bp overlap
CREB1 6 datasets
ChIP GM12878 ENCSR000BUF.CREB1.GM12878 109 bp overlap
ChIP Hep-G2 ENCSR000BVL.CREB1.Hep-G2 255 bp overlap
ChIP Hep-G2 ENCSR112ALD.CREB1.Hep-G2 232 bp overlap
ChIP HepG2 ENCFF245CBB 178 bp overlap
ChIP HepG2 ENCFF576ERP 287 bp overlap
ChIP HepG2 ENCFF792THT 287 bp overlap
CREM 2 datasets
ChIP Hep-G2 ENCSR903ELW.CREM.Hep-G2 262 bp overlap
ChIP HepG2 ENCFF049UDY 287 bp overlap
CTNNB1 1 dataset
ChIP hiPSC_D2 GSE132532.CTNNB1.hiPSC_D2 287 bp overlap
DLX1 1 dataset
Motif DE_12h DE_12h-DLX1_MA0879.3 6 bp overlap
DLX6 1 dataset
Motif DE_12h DE_12h-DLX6_MA0882.2 6 bp overlap
Dlx2 1 dataset
Motif DE_12h DE_12h-Dlx2_MA0885.3 8 bp overlap
Dlx3 1 dataset
Motif DE_12h DE_12h-Dlx3_MA0880.2 6 bp overlap
Dlx4 1 dataset
Motif DE_12h DE_12h-Dlx4_MA0881.2 6 bp overlap
Dlx5 1 dataset
Motif DE_12h DE_12h-Dlx5_MA1476.3 8 bp overlap
EBF1 1 dataset
ChIP GM12878 ENCFF167CZS 266 bp overlap
ELF4 1 dataset
Motif DE_12h DE_12h-ELF4_MA0641.1 12 bp overlap
EOMES 1 dataset
Motif DE_12h DE_12h-EOMES_MA0800.2 9 bp overlap
EP300 3 datasets
ChIP Hep-G2 ENCSR000BLW.EP300.Hep-G2 256 bp overlap
ChIP neural ENCSR843ZUP.EP300.neural 177 bp overlap
ChIP neural cell ENCFF442QNK 287 bp overlap
ERG 1 dataset
ChIP VCaP_ETOH GSE49091.ERG.VCaP_ETOH 142 bp overlap
FOXA2 2 datasets
ChIP Caco-2 GSE66218.FOXA2.Caco-2 199 bp overlap
ChIP HepG2 ENCFF894AYY 287 bp overlap
FOXJ3 1 dataset
ChIP Hep-G2 ENCSR413AJG.FOXJ3.Hep-G2 188 bp overlap
FOXP1 1 dataset
ChIP Hep-G2 ENCSR369YUK.FOXP1.Hep-G2 198 bp overlap
FOXP4 1 dataset
ChIP Hep-G2 ENCSR232LLP.FOXP4.Hep-G2 245 bp overlap
GATA2 4 datasets
ChIP Hep-G2 ENCSR897LDT.GATA2.Hep-G2 268 bp overlap
ChIP HepG2 ENCFF905PYM 287 bp overlap
ChIP SK-N-SH ENCFF764OZD 270 bp overlap
ChIP SK-N-SH ENCSR706VOO.GATA2.SK-N-SH 119 bp overlap
GATA3 1 dataset
ChIP SK-N-BE2-C GSE94822.GATA3.SK-N-BE2-C 250 bp overlap
GATA4 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 287 bp overlap
GATA6 7 datasets
ChIP DE_D1 S09-DE-d1-GATA6-exp1 279 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 221 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 287 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 287 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 287 bp overlap
ChIP YCC-3 GSE51705.GATA6.YCC-3 194 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 172 bp overlap
GBX2 1 dataset
Motif DE_12h DE_12h-GBX2_MA0890.2 6 bp overlap
HAND2 2 datasets
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 97 bp overlap
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 264 bp overlap
HESX1 1 dataset
Motif DE_12h DE_12h-HESX1_MA0894.2 6 bp overlap
HMG20A 1 dataset
ChIP HepG2 ENCFF599VWU 287 bp overlap
HNF4A 6 datasets
ChIP Caco-2_DIFF GSE23436.HNF4A.Caco-2_DIFF 259 bp overlap
ChIP Hep-G2 ENCSR469FBY.HNF4A.Hep-G2 258 bp overlap
ChIP Hep-G2 ENCSR000EEU.HNF4A.Hep-G2 146 bp overlap
ChIP Hep-G2 ENCSR000BLF.HNF4A.Hep-G2 170 bp overlap
ChIP Hep-G2 ERP000209.HNF4A.Hep-G2 197 bp overlap
ChIP HepG2 ENCFF146SSF 287 bp overlap
HNF4G 2 datasets
ChIP Hep-G2 ENCSR000BNJ.HNF4G.Hep-G2 140 bp overlap
ChIP HepG2 ENCFF323ATZ 265 bp overlap
HNRNPC 1 dataset
ChIP Hep-G2 GSE120104.HNRNPC.Hep-G2 236 bp overlap
HOXA3 2 datasets
ChIP Hep-G2 ENCSR999JKC.HOXA3.Hep-G2 198 bp overlap
ChIP HepG2 ENCFF374TCI 287 bp overlap
HOXA6 1 dataset
Motif DE_12h DE_12h-HOXA6_MA1497.2 7 bp overlap
HOXA7 1 dataset
Motif DE_12h DE_12h-HOXA7_MA1498.3 6 bp overlap
HOXB6 1 dataset
Motif DE_12h DE_12h-HOXB6_MA1500.2 7 bp overlap
HOXB7 1 dataset
Motif DE_12h DE_12h-HOXB7_MA1501.2 7 bp overlap
HOXB8 1 dataset
Motif DE_12h DE_12h-HOXB8_MA1502.2 7 bp overlap
HOXD8 1 dataset
Motif DE_12h DE_12h-HOXD8_MA0910.3 7 bp overlap
Hmx1 1 dataset
Motif DE_12h DE_12h-Hmx1_MA0896.2 9 bp overlap
Hmx2 1 dataset
Motif DE_12h DE_12h-Hmx2_MA0897.2 15 bp overlap
Hmx3 1 dataset
Motif DE_12h DE_12h-Hmx3_MA0898.2 9 bp overlap
IKZF1 1 dataset
ChIP pre-B-cell GSE107886.IKZF1.pre-B-cell 287 bp overlap
IKZF3 1 dataset
ChIP pre-B-cell GSE107886.IKZF3.pre-B-cell 284 bp overlap
ISL1 1 dataset
ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 275 bp overlap
ISL2 2 datasets
ChIP Hep-G2 ENCSR492IHH.ISL2.Hep-G2 287 bp overlap
ChIP HepG2 ENCFF742RIP 287 bp overlap
JUN 1 dataset
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 230 bp overlap
KDM1A 1 dataset
ChIP HepG2 ENCFF240UWG 287 bp overlap
LBX2 1 dataset
Motif DE_12h DE_12h-LBX2_MA0699.2 6 bp overlap
LHX2 1 dataset
Motif DE_12h DE_12h-LHX2_MA0700.3 6 bp overlap
MED1 1 dataset
ChIP Hep-G2 ENCSR959XNY.MED1.Hep-G2 134 bp overlap
MEF2A 1 dataset
ChIP GM12878 ENCSR000BKB.MEF2A.GM12878 135 bp overlap
MEF2B 1 dataset
ChIP GM12878 ENCSR177VFS.MEF2B.GM12878 257 bp overlap
MEIS1 1 dataset
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
MGA 1 dataset
Motif DE_12h DE_12h-MGA_MA0801.1 8 bp overlap
MSX1 1 dataset
Motif DE_12h DE_12h-MSX1_MA0666.3 6 bp overlap
MSX2 1 dataset
Motif DE_12h DE_12h-MSX2_MA0708.3 6 bp overlap
MTA2 1 dataset
ChIP pre-B-cell GSE107886.MTA2.pre-B-cell 266 bp overlap
MYBL2 1 dataset
ChIP Hep-G2 ENCSR000BRO.MYBL2.Hep-G2 206 bp overlap
Msx3 1 dataset
Motif DE_12h DE_12h-Msx3_MA0709.2 6 bp overlap
NANOG 2 datasets
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 223 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 262 bp overlap
NIPBL 1 dataset
ChIP HCT-116_RAD21-mAC GSE104888.NIPBL.HCT-116_RAD21-mAC 253 bp overlap
NKX2-4 1 dataset
Motif DE_12h DE_12h-NKX2-4_MA2003.2 8 bp overlap
NKX2-8 1 dataset
Motif DE_12h DE_12h-NKX2-8_MA0673.2 8 bp overlap
NOTCH1 1 dataset
ChIP HPBALL GSE39263.NOTCH1.HPBALL 256 bp overlap
Nkx2-1 1 dataset
Motif DE_12h DE_12h-Nkx2-1_MA1994.2 7 bp overlap
Nobox 1 dataset
Motif DE_12h DE_12h-Nobox_MA0125.2 6 bp overlap
PAX1 1 dataset
Motif DE_12h DE_12h-PAX1_MA0779.2 16 bp overlap
PAX2 1 dataset
Motif DE_12h DE_12h-PAX2_MA0067.3 16 bp overlap
PAX8 1 dataset
Motif DE_12h DE_12h-PAX8_MA2094.1 16 bp overlap
PAX9 1 dataset
Motif DE_12h DE_12h-PAX9_MA0781.2 16 bp overlap
PHOX2B 1 dataset
ChIP SK-N-BE2-C GSE94822.PHOX2B.SK-N-BE2-C 80 bp overlap
POGZ 1 dataset
ChIP HepG2 ENCFF153UUK 287 bp overlap
PROX1 2 datasets
ChIP HepG2 ENCFF016ZJS 287 bp overlap
ChIP SW480 GSE60390.PROX1.SW480 182 bp overlap
RAX 1 dataset
Motif DE_12h DE_12h-RAX_MA0718.2 6 bp overlap
RBPJ 1 dataset
Motif DE_12h DE_12h-RBPJ_MA1116.2 6 bp overlap
SMARCA4 3 datasets
ChIP A-549_AG15685 GSE132290.SMARCA4.A-549_AG15685 171 bp overlap
ChIP NPC_siSOX GSE122631.SMARCA4.NPC_siSOX 227 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 216 bp overlap
SMARCC1 2 datasets
ChIP Hep-G2 GSE108514.SMARCC1.Hep-G2 287 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 137 bp overlap
SOX10 1 dataset
ChIP 501-mel GSE61965.SOX10.501-mel 241 bp overlap
SOX13 1 dataset
ChIP HepG2 ENCFF062VSQ 230 bp overlap
SOX2 4 datasets
ChIP LK2 GSE137459.SOX2.LK2 287 bp overlap
ChIP LK2_GFP GSE137459.SOX2.LK2_GFP 287 bp overlap
ChIP hiPSC_INHI GSE67282.SOX2.hiPSC_INHI 240 bp overlap
ChIP hiPSC_KDP53_INHI GSE67282.SOX2.hiPSC_KDP53_INHI 274 bp overlap
SOX5 1 dataset
ChIP HepG2 ENCFF470KZD 168 bp overlap
SOX6 2 datasets
ChIP Hep-G2 ENCSR766TSU.SOX6.Hep-G2 287 bp overlap
ChIP HepG2 ENCFF767OCK 287 bp overlap
Sox6 1 dataset
Motif DE_12h DE_12h-Sox6_MA0515.1 10 bp overlap
T 1 dataset
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 187 bp overlap
TBR1 1 dataset
Motif DE_12h DE_12h-TBR1_MA0802.2 9 bp overlap
TBX1 1 dataset
Motif DE_12h DE_12h-TBX1_MA0805.1 8 bp overlap
TBX15 1 dataset
Motif DE_12h DE_12h-TBX15_MA0803.1 8 bp overlap
TBX2 1 dataset
ChIP SK-N-BE2-C GSE94822.TBX2.SK-N-BE2-C 68 bp overlap
TBX4 1 dataset
Motif DE_12h DE_12h-TBX4_MA0806.1 8 bp overlap
TCF7 4 datasets
ChIP GM12878 ENCFF749DPM 287 bp overlap
ChIP GM12878 ENCSR501DKS.TCF7.GM12878 199 bp overlap
ChIP Hep-G2 ENCSR444LIN.TCF7.Hep-G2 287 bp overlap
ChIP HepG2 ENCFF628OFQ 287 bp overlap
TCF7L2 6 datasets
ChIP HCT-116 ENCSR000EUV.TCF7L2.HCT-116 287 bp overlap
ChIP HCT-116_sc2 GSE127960.TCF7L2.HCT-116_sc2 270 bp overlap
ChIP HCT116 ENCFF038POZ 114 bp overlap
ChIP Hep-G2 ENCSR346BOD.TCF7L2.Hep-G2 198 bp overlap
ChIP HepG2 ENCFF510OLG 287 bp overlap
ChIP LNCaP GSE51621.TCF7L2.LNCaP 195 bp overlap
TFE3 1 dataset
ChIP Hep-G2 ENCSR589SNT.TFE3.Hep-G2 220 bp overlap
ZBTB21 2 datasets
ChIP Hep-G2 ENCSR549PAU.ZBTB21.Hep-G2 287 bp overlap
ChIP HepG2 ENCFF276JLT 184 bp overlap
ZHX2 1 dataset
ChIP Hep-G2 ENCSR407BEZ.ZHX2.Hep-G2 121 bp overlap
ZNF12 2 datasets
ChIP Hep-G2 ENCSR711KBM.ZNF12.Hep-G2 287 bp overlap
ChIP HepG2 ENCFF347LSW 204 bp overlap
ZNF219 1 dataset
ChIP HepG2 ENCFF266JIR 287 bp overlap
ZNF528 1 dataset
ChIP HEK293 GSE76494.ZNF528.HEK293 187 bp overlap
ZNF644 1 dataset
ChIP HepG2 ENCFF352VGJ 287 bp overlap
ZNF750 1 dataset
ChIP keratinocyte_diff GSE57702.ZNF750.keratinocyte_diff 149 bp overlap
ZNF76 1 dataset
Motif DE_12h DE_12h-ZNF76_MA1716.2 17 bp overlap
ZSCAN31 1 dataset
Motif DE_12h DE_12h-ZSCAN31_MA1722.2 18 bp overlap
Zbtb2 1 dataset
Motif DE_12h DE_12h-Zbtb2_MA2340.1 10 bp overlap