chr4 : 133,668,128 – 133,668,762
634 bp 129 TFs 0 linked genes
This 634 bp open chromatin element has no linked target genes and is bound by 129 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:133,663,128 – 133,673,762
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
129 transcription factors
Source
Cell type
APC 1 dataset
ChIP HCT-116 GSE103894.APC.HCT-116 462 bp overlap
AR 2 datasets
ChIP LNCaP GSE63202.AR.LNCaP 160 bp overlap
ChIP LNCaP_r1881 GSE94682.AR.LNCaP_r1881 134 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 398 bp overlap
BCL11B 1 dataset
ChIP thymus_CD34pos GSE84677.BCL11B.thymus_CD34pos 116 bp overlap
BHLHE22 2 datasets
ChIP CAL-1 GSE43876.BHLHE22.CAL-1 328 bp overlap
Motif DE_12h DE_12h-BHLHE22_MA1635.2 6 bp overlap
BRD2 1 dataset
ChIP K-562 GSE140325.BRD2.K-562 228 bp overlap
BRD4 2 datasets
ChIP K-562_DMSO GSE99178.BRD4.K-562_DMSO 157 bp overlap
ChIP MM1-S_JQ1_50NM GSE42355.BRD4.MM1-S_JQ1_50NM 319 bp overlap
CDK9 2 datasets
ChIP MM1-S_JQ1_5000NM GSE49224.CDK9.MM1-S_JQ1_5000NM 191 bp overlap
ChIP MM1-S_JQ1_500NM GSE42355.CDK9.MM1-S_JQ1_500NM 167 bp overlap
CDX2 1 dataset
Motif ES_0h ES_0h-CDX2_MA0465.3 8 bp overlap
CTCF 1 dataset
ChIP hiPSC_IB12 GSE106870.CTCF.hiPSC_IB12 123 bp overlap
Crx 1 dataset
Motif ES_0h ES_0h-Crx_MA0467.3 6 bp overlap
Dmbx1 1 dataset
Motif ES_0h ES_0h-Dmbx1_MA0883.2 10 bp overlap
ELF1 2 datasets
Motif DE_12h DE_12h-ELF1_MA0473.4 9 bp overlap
ChIP K-562 ENCSR000BMD.ELF1.K-562 117 bp overlap
ELF3 1 dataset
Motif DE_12h DE_12h-ELF3_MA0640.3 9 bp overlap
ERF::FIGLA 2 datasets
Motif DE_12h DE_12h-ERFFIGLA_MA1934.2 13 bp overlap
Motif DE_12h DE_12h-ERFFIGLA_MA1934.2 13 bp overlap
ERG 1 dataset
ChIP Jurkat GSE49091.ERG.Jurkat 339 bp overlap
ESR1 10 datasets
ChIP MCF-7_ARID1A-KO_clone14 GSE123284.ESR1.MCF-7_ARID1A-KO_clone14 188 bp overlap
ChIP MCF-7_E2 GSE60270.ESR1.MCF-7_E2 178 bp overlap
ChIP MCF-7_E2-5min-ERalpha GSE94023.ESR1.MCF-7_E2-5min-ERalpha 112 bp overlap
ChIP MCF-7_E2_talen GSE94493.ESR1.MCF-7_E2_talen 147 bp overlap
ChIP MCF-7_estradiol-Dex_4h GSE99626.ESR1.MCF-7_estradiol-Dex_4h 224 bp overlap
ChIP MCF-7_estradiol_4h GSE99626.ESR1.MCF-7_estradiol_4h 166 bp overlap
ChIP MCF-7_jc5849 GSE126004.ESR1.MCF-7_jc5849 179 bp overlap
ChIP MCF-7_jc5850 GSE126004.ESR1.MCF-7_jc5850 239 bp overlap
ChIP MCF-7_vehicle_45min_H2 GSE99626.ESR1.MCF-7_vehicle_45min_H2 311 bp overlap
ChIP breast_tumor_BADOUTCOME GSE40867.ESR1.breast_tumor_BADOUTCOME 319 bp overlap
ESR1_Y537C 1 dataset
ChIP SUM44PE__ESR1_mutant_LTED GSE100074.ESR1_Y537C.SUM44PE__ESR1_mutant_LTED 243 bp overlap
ESR1_Y537N 2 datasets
ChIP MCF-7_dox GSE94493.ESR1_Y537N.MCF-7_dox 230 bp overlap
ChIP MCF-7_dox_E2 GSE94493.ESR1_Y537N.MCF-7_dox_E2 214 bp overlap
ETV1 2 datasets
Motif DE_12h DE_12h-ETV1_MA0761.3 9 bp overlap
ChIP GIST-T1 GSE106624.ETV1.GIST-T1 211 bp overlap
ETV2::FIGLA 2 datasets
Motif DE_12h DE_12h-ETV2FIGLA_MA1941.2 13 bp overlap
Motif DE_12h DE_12h-ETV2FIGLA_MA1941.2 13 bp overlap
ETV5::FIGLA 3 datasets
Motif DE_12h DE_12h-ETV5FIGLA_MA1945.2 14 bp overlap
Motif DE_12h DE_12h-ETV5FIGLA_MA1945.2 14 bp overlap
Motif ES_0h ES_0h-ETV5FIGLA_MA1945.2 14 bp overlap
Erg 1 dataset
Motif DE_12h DE_12h-Erg_MA0474.4 10 bp overlap
FIGLA 1 dataset
Motif DE_12h DE_12h-FIGLA_MA0820.2 6 bp overlap
FOXO1::FLI1 1 dataset
Motif DE_12h DE_12h-FOXO1FLI1_MA1956.2 13 bp overlap
GABPA 1 dataset
Motif DE_12h DE_12h-GABPA_MA0062.4 10 bp overlap
GATA2 1 dataset
ChIP hiPSC_SLC6ebs GSE107639.GATA2.hiPSC_SLC6ebs 95 bp overlap
GFI1 1 dataset
Motif DE_12h DE_12h-GFI1_MA0038.3 11 bp overlap
GSC 1 dataset
Motif ES_0h ES_0h-GSC_MA0648.2 6 bp overlap
GSC2 1 dataset
Motif ES_0h ES_0h-GSC2_MA0891.2 6 bp overlap
GTF3C2 1 dataset
ChIP H9 GSE94418.GTF3C2.H9 302 bp overlap
HAND2 1 dataset
Motif DE_12h DE_12h-HAND2_MA1638.2 6 bp overlap
HIC2 1 dataset
Motif DE_12h DE_12h-HIC2_MA0738.2 6 bp overlap
IKZF2 3 datasets
Motif DE_12h DE_12h-IKZF2_MA2326.1 6 bp overlap
Motif DE_12h DE_12h-IKZF2_MA2326.1 6 bp overlap
Motif DE_12h DE_12h-IKZF2_MA2326.1 6 bp overlap
IRF3 1 dataset
Motif DE_12h DE_12h-IRF3_MA1418.2 17 bp overlap
IRF4 2 datasets
ChIP NCI-H929 GSE142493.IRF4.NCI-H929 238 bp overlap
ChIP NCI-H929 GSE56857.IRF4.NCI-H929 238 bp overlap
ISL2 1 dataset
Motif ES_0h ES_0h-ISL2_MA0914.2 6 bp overlap
Ikzf3 2 datasets
Motif DE_12h DE_12h-Ikzf3_MA1992.2 9 bp overlap
Motif DE_12h DE_12h-Ikzf3_MA1992.2 9 bp overlap
JUN 1 dataset
ChIP HAEC_oxpapc_4h GSE89970.JUN.HAEC_oxpapc_4h 77 bp overlap
KDM5B 1 dataset
ChIP WA01 ENCSR000AUR.KDM5B.WA01 135 bp overlap
KLF10 1 dataset
Motif ES_0h ES_0h-KLF10_MA1511.2 9 bp overlap
KLF12 1 dataset
Motif ES_0h ES_0h-KLF12_MA0742.2 9 bp overlap
KLF14 1 dataset
Motif ES_0h ES_0h-KLF14_MA0740.2 9 bp overlap
KLF16 1 dataset
Motif ES_0h ES_0h-KLF16_MA0741.1 11 bp overlap
KLF5 1 dataset
Motif ES_0h ES_0h-KLF5_MA0599.1 10 bp overlap
MAF::NFE2 1 dataset
Motif DE_12h DE_12h-MAFNFE2_MA0501.2 11 bp overlap
MAFG::NFE2L1 1 dataset
Motif DE_12h DE_12h-MAFGNFE2L1_MA0089.3 11 bp overlap
MAZ 1 dataset
Motif ES_0h ES_0h-MAZ_MA1522.2 8 bp overlap
MSANTD3 1 dataset
Motif DE_12h DE_12h-MSANTD3_MA1523.2 7 bp overlap
MYB 3 datasets
ChIP Jurkat GSE59657.MYB.Jurkat 262 bp overlap
ChIP MOLT-3 GSE59657.MYB.MOLT-3 202 bp overlap
ChIP PF-382 GSE94000.MYB.PF-382 278 bp overlap
MYOD1 1 dataset
Motif DE_12h DE_12h-MYOD1_MA0499.3 9 bp overlap
NCOA2 1 dataset
ChIP MCF-7_E2 ERP000901.NCOA2.MCF-7_E2 139 bp overlap
NR2C1 2 datasets
Motif DE_12h DE_12h-NR2C1_MA1535.2 6 bp overlap
Motif ES_0h ES_0h-NR2C1_MA1535.2 6 bp overlap
NR2C2 5 datasets
Motif DE_12h DE_12h-NR2C2_MA0504.2 14 bp overlap
Motif DE_12h DE_12h-NR2C2_MA0504.2 14 bp overlap
Motif DE_12h DE_12h-NR2C2_MA1536.2 6 bp overlap
Motif ES_0h ES_0h-NR2C2_MA0504.2 14 bp overlap
Motif ES_0h ES_0h-NR2C2_MA1536.2 6 bp overlap
NRIP1 1 dataset
ChIP MCF-7_E2 ERP005838.NRIP1.MCF-7_E2 143 bp overlap
Neurod2 1 dataset
Motif DE_12h DE_12h-Neurod2_MA1993.2 6 bp overlap
Nfe2l2 1 dataset
Motif DE_12h DE_12h-Nfe2l2_MA0150.3 11 bp overlap
Nr1H2 2 datasets
Motif DE_12h DE_12h-Nr1H2_MA1996.2 6 bp overlap
Motif ES_0h ES_0h-Nr1H2_MA1996.2 6 bp overlap
Nr1H4 2 datasets
Motif DE_12h DE_12h-Nr1H4_MA1110.3 6 bp overlap
Motif ES_0h ES_0h-Nr1H4_MA1110.3 6 bp overlap
Nr1h3 2 datasets
Motif DE_12h DE_12h-Nr1h3_MA2337.1 6 bp overlap
Motif ES_0h ES_0h-Nr1h3_MA2337.1 6 bp overlap
Nr2e1 1 dataset
Motif DE_12h DE_12h-Nr2e1_MA0676.1 9 bp overlap
OTX1 1 dataset
Motif ES_0h ES_0h-OTX1_MA0711.2 6 bp overlap
OTX2 1 dataset
ChIP WTC11 ENCFF634NAO 245 bp overlap
Olig2 1 dataset
Motif DE_12h DE_12h-Olig2_MA1997.2 6 bp overlap
PATZ1 1 dataset
Motif ES_0h ES_0h-PATZ1_MA1961.2 11 bp overlap
PDX1 1 dataset
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 150 bp overlap
PITX1 1 dataset
Motif ES_0h ES_0h-PITX1_MA0682.3 6 bp overlap
PITX2 1 dataset
Motif ES_0h ES_0h-PITX2_MA1547.2 8 bp overlap
PITX3 1 dataset
Motif ES_0h ES_0h-PITX3_MA0714.2 6 bp overlap
POU2F2 1 dataset
ChIP HNPC_UNDIF GSE74814.POU2F2.HNPC_UNDIF 124 bp overlap
POU5F1 1 dataset
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 229 bp overlap
PPARA::RXRA 2 datasets
Motif DE_12h DE_12h-PPARARXRA_MA1148.2 17 bp overlap
Motif ES_0h ES_0h-PPARARXRA_MA1148.2 17 bp overlap
PPARD 1 dataset
Motif DE_12h DE_12h-PPARD_MA1550.2 14 bp overlap
Ptf1A 1 dataset
Motif DE_12h DE_12h-Ptf1A_MA1620.2 8 bp overlap
RARA::RXRA 1 dataset
Motif DE_12h DE_12h-RARARXRA_MA0159.1 17 bp overlap
RARA::RXRG 1 dataset
Motif DE_12h DE_12h-RARARXRG_MA1149.2 17 bp overlap
RHOXF1 1 dataset
Motif ES_0h ES_0h-RHOXF1_MA0719.2 6 bp overlap
RORA 2 datasets
Motif DE_12h DE_12h-RORA_MA0071.1 10 bp overlap
Motif ES_0h ES_0h-RORA_MA0071.1 10 bp overlap
RORB 2 datasets
Motif DE_12h DE_12h-RORB_MA1150.2 10 bp overlap
Motif ES_0h ES_0h-RORB_MA1150.2 10 bp overlap
RORC 2 datasets
Motif DE_12h DE_12h-RORC_MA1151.2 10 bp overlap
Motif ES_0h ES_0h-RORC_MA1151.2 10 bp overlap
RXRB 1 dataset
Motif DE_12h DE_12h-RXRB_MA0855.1 14 bp overlap
RXRG 1 dataset
Motif DE_12h DE_12h-RXRG_MA0856.1 14 bp overlap
Rarb 1 dataset
Motif DE_12h DE_12h-Rarb_MA0857.1 16 bp overlap
Rxra 1 dataset
Motif DE_12h DE_12h-Rxra_MA0512.2 14 bp overlap
SIN3A 1 dataset
ChIP hiPSC_IID12 GSE106870.SIN3A.hiPSC_IID12 162 bp overlap
SMAD2 1 dataset
Motif DE_12h DE_12h-SMAD2_MA1964.2 6 bp overlap
SNAI2 1 dataset
Motif DE_12h DE_12h-SNAI2_MA0745.3 8 bp overlap
SNAI3 1 dataset
Motif DE_12h DE_12h-SNAI3_MA1559.2 9 bp overlap
SOX10 1 dataset
Motif DE_12h DE_12h-SOX10_MA0442.3 6 bp overlap
SP1 1 dataset
Motif ES_0h ES_0h-SP1_MA0079.5 9 bp overlap
SP2 1 dataset
Motif ES_0h ES_0h-SP2_MA0516.3 9 bp overlap
SP3 1 dataset
Motif ES_0h ES_0h-SP3_MA0746.3 11 bp overlap
SP4 1 dataset
Motif ES_0h ES_0h-SP4_MA0685.2 9 bp overlap
SP5 1 dataset
Motif ES_0h ES_0h-SP5_MA1965.2 6 bp overlap
SP8 1 dataset
Motif ES_0h ES_0h-SP8_MA0747.2 11 bp overlap
SPI1 2 datasets
ChIP CTV-1_FLAG_15perc GSE128835.SPI1.CTV-1_FLAG_15perc 295 bp overlap
ChIP NCI-H929 GSE56857.SPI1.NCI-H929 363 bp overlap
SPIC 1 dataset
Motif DE_12h DE_12h-SPIC_MA0687.2 13 bp overlap
STAT1::STAT2 1 dataset
Motif DE_12h DE_12h-STAT1STAT2_MA0517.2 13 bp overlap
Spz1 1 dataset
Motif DE_12h DE_12h-Spz1_MA0111.1 11 bp overlap
TAF1 1 dataset
ChIP K-562 ENCSR000BKS.TAF1.K-562 122 bp overlap
TAL1 1 dataset
ChIP MOLT-3 GSE59657.TAL1.MOLT-3 323 bp overlap
TCF4 2 datasets
ChIP CAL-1 GSE76147.TCF4.CAL-1 416 bp overlap
ChIP GEN2-2 GSE76147.TCF4.GEN2-2 440 bp overlap
TEAD4 1 dataset
ChIP hMSC-TERT4 GSE140782.TEAD4.hMSC-TERT4 158 bp overlap
TFAP2B 1 dataset
Motif ES_0h ES_0h-TFAP2B_MA0813.1 13 bp overlap
TFAP4 1 dataset
Motif DE_12h DE_12h-TFAP4_MA0691.1 10 bp overlap
TFAP4::ETV1 2 datasets
Motif DE_12h DE_12h-TFAP4ETV1_MA1966.2 13 bp overlap
Motif DE_12h DE_12h-TFAP4ETV1_MA1966.2 13 bp overlap
TFAP4::FLI1 1 dataset
Motif DE_12h DE_12h-TFAP4FLI1_MA1967.2 14 bp overlap
THAP1 1 dataset
Motif DE_12h DE_12h-THAP1_MA0597.3 8 bp overlap
THRA 1 dataset
Motif DE_12h DE_12h-THRA_MA1969.2 18 bp overlap
THRB 2 datasets
Motif DE_12h DE_12h-THRB_MA1574.2 13 bp overlap
Motif ES_0h ES_0h-THRB_MA1574.2 13 bp overlap
TRIM28 1 dataset
ChIP hESC GSE115387.TRIM28.hESC 207 bp overlap
TWIST1 1 dataset
Motif DE_12h DE_12h-TWIST1_MA1123.3 8 bp overlap
Tcf12 1 dataset
Motif DE_12h DE_12h-Tcf12_MA0521.3 6 bp overlap
Twist2 1 dataset
Motif DE_12h DE_12h-Twist2_MA0633.3 6 bp overlap
VDR 1 dataset
ChIP LNCaP GSE64656.VDR.LNCaP 432 bp overlap
Wt1 1 dataset
Motif ES_0h ES_0h-Wt1_MA1627.2 10 bp overlap
ZBTB24 1 dataset
Motif DE_12h DE_12h-ZBTB24_MA2330.1 10 bp overlap
ZBTB26 1 dataset
Motif DE_12h DE_12h-ZBTB26_MA1579.2 8 bp overlap
ZBTB7A 1 dataset
Motif DE_12h DE_12h-ZBTB7A_MA0750.3 9 bp overlap
ZEB1 1 dataset
Motif DE_12h DE_12h-ZEB1_MA0103.4 6 bp overlap
ZFP14 1 dataset
Motif DE_12h DE_12h-ZFP14_MA1972.1 15 bp overlap
ZNF148 1 dataset
Motif ES_0h ES_0h-ZNF148_MA1653.2 10 bp overlap
ZNF281 1 dataset
Motif ES_0h ES_0h-ZNF281_MA1630.3 10 bp overlap
ZNF418 1 dataset
Motif ES_0h ES_0h-ZNF418_MA1980.1 15 bp overlap
ZNF462 1 dataset
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 458 bp overlap
ZNF530 1 dataset
Motif DE_12h DE_12h-ZNF530_MA1981.2 14 bp overlap
ZNF610 1 dataset
Motif DE_12h DE_12h-ZNF610_MA1713.2 10 bp overlap
ZNF682 1 dataset
Motif ES_0h ES_0h-ZNF682_MA1599.2 11 bp overlap
Zfp335 1 dataset
Motif DE_12h DE_12h-Zfp335_MA2002.2 7 bp overlap
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