chr4 : 101,334,962 101,335,905
943 bp 130 TFs 0 linked genes
This 943 bp open chromatin element has no linked target genes and is bound by 130 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:101,329,962 – 101,340,905
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
130 transcription factors
Source
Cell type
AR 1 dataset
ChIP LNCaP GSE80256.AR.LNCaP 303 bp overlap
ATF2 1 dataset
ChIP GM12878 ENCSR000BQK.ATF2.GM12878 269 bp overlap
ATOH7 2 datasets
Motif DE_12h DE_12h-ATOH7_MA1468.1 10 bp overlap
Motif DE_36h DE_36h-ATOH7_MA1468.1 10 bp overlap
BATF 1 dataset
ChIP GM12878 ENCFF954REE 174 bp overlap
BHLHA15 2 datasets
Motif DE_12h DE_12h-BHLHA15_MA0607.2 10 bp overlap
Motif DE_36h DE_36h-BHLHA15_MA0607.2 10 bp overlap
BRD3 1 dataset
ChIP MV4-11_IBET151_50nM GSE120715.BRD3.MV4-11_IBET151_50nM 141 bp overlap
BRD4 1 dataset
ChIP K-562_DMSO GSE99178.BRD4.K-562_DMSO 200 bp overlap
CDK9 1 dataset
ChIP MM1-S_DMSO GSE42161.CDK9.MM1-S_DMSO 225 bp overlap
CDX1 1 dataset
Motif DE_36h DE_36h-CDX1_MA0878.3 10 bp overlap
CDX2 1 dataset
Motif DE_36h DE_36h-CDX2_MA0465.3 8 bp overlap
CDX4 1 dataset
Motif DE_36h DE_36h-CDX4_MA1473.2 9 bp overlap
CREB1 2 datasets
ChIP GM12878 ENCFF870CVH 306 bp overlap
ChIP GM12878 ENCSR000BUF.CREB1.GM12878 251 bp overlap
CTCFL 1 dataset
Motif DE_36h DE_36h-CTCFL_MA1102.3 8 bp overlap
CTNNB1 1 dataset
ChIP hiPSC_D2 GSE132532.CTNNB1.hiPSC_D2 349 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 297 bp overlap
ERG 1 dataset
ChIP aortic-endothelial-cell_D26 GSE139377.ERG.aortic-endothelial-cell_D26 168 bp overlap
FOS 1 dataset
ChIP HCT-116_A7A GSE152144.FOS.HCT-116_A7A 65 bp overlap
FOXA1 3 datasets
ChIP LNCaP_S2101-48H GSE114266.FOXA1.LNCaP_S2101-48H 208 bp overlap
ChIP LNCaP_SHFOXA1_R1881 GSE37345.FOXA1.LNCaP_SHFOXA1_R1881 108 bp overlap
ChIP PDAC_SHCTR GSE64557.FOXA1.PDAC_SHCTR 400 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 705 bp overlap
ChIP DE DE-FOXA2-2 793 bp overlap
FOXC1 1 dataset
Motif DE_36h DE_36h-FOXC1_MA0032.2 11 bp overlap
FOXC2 1 dataset
Motif DE_36h DE_36h-FOXC2_MA0846.2 11 bp overlap
FOXD2 1 dataset
Motif DE_36h DE_36h-FOXD2_MA0847.4 11 bp overlap
FOXD3 1 dataset
Motif DE_36h DE_36h-FOXD3_MA0041.3 14 bp overlap
FOXL2 2 datasets
ChIP KGN_1512 GSE138496.FOXL2.KGN_1512 242 bp overlap
ChIP KGN_1513 GSE138496.FOXL2.KGN_1513 403 bp overlap
FOXO6 1 dataset
Motif DE_36h DE_36h-FOXO6_MA0849.1 7 bp overlap
GATA1 3 datasets
Motif DE_36h DE_36h-GATA1_MA0035.5 7 bp overlap
ChIP HUDEP-2_30min GSE104676.GATA1.HUDEP-2_30min 55 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 142 bp overlap
GATA2 5 datasets
ChIP CD34_ACY957 GSE60792.GATA2.CD34_ACY957 141 bp overlap
ChIP LNCaP GSE38391.GATA2.LNCaP 105 bp overlap
ChIP LNCaP GSE52725.GATA2.LNCaP 105 bp overlap
ChIP LNCaP_CSFCS GSE69043.GATA2.LNCaP_CSFCS 56 bp overlap
ChIP dermal-fibroblast_alone GSE51025.GATA2.dermal-fibroblast_alone 239 bp overlap
GATA3 2 datasets
ChIP BE2C GSE65664.GATA3.BE2C 100 bp overlap
ChIP SH-SY5Y ENCSR000EXZ.GATA3.SH-SY5Y 160 bp overlap
GATA4 8 datasets
ChIP BJ1-hTERT GSE92491.GATA4.BJ1-hTERT 294 bp overlap
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.GATA4.BJ1-hTERT_FOXA2_GATA4_Coexp 175 bp overlap
ChIP DE DE-GATA4-1 682 bp overlap
ChIP DE DE-GATA4-2 754 bp overlap
ChIP G296S GSE85628.GATA4.G296S 182 bp overlap
ChIP G296S_2 GSE85628.GATA4.G296S_2 182 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 454 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 676 bp overlap
GATA6 11 datasets
ChIP DE DE-GATA6-1 709 bp overlap
ChIP DE DE-GATA6-2 724 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 790 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 813 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 859 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 681 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 934 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 917 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 437 bp overlap
ChIP foregut GSE117136.GATA6.foregut 314 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 507 bp overlap
GRHL1 1 dataset
Motif DE_36h DE_36h-GRHL1_MA0647.2 10 bp overlap
HIC2 1 dataset
Motif DE_36h DE_36h-HIC2_MA0738.2 6 bp overlap
HOXA10 1 dataset
Motif DE_36h DE_36h-HOXA10_MA0899.2 9 bp overlap
HOXD9 1 dataset
Motif DE_36h DE_36h-HOXD9_MA0913.3 9 bp overlap
Hmx2 1 dataset
Motif DE_36h DE_36h-Hmx2_MA0897.2 15 bp overlap
Hoxa13 1 dataset
Motif DE_36h DE_36h-Hoxa13_MA0650.4 8 bp overlap
IRF1 4 datasets
ChIP AsPC-1_ZBED2-cDNA GSE141606.IRF1.AsPC-1_ZBED2-cDNA 216 bp overlap
ChIP K-562 ENCSR854MCV.IRF1.K-562 648 bp overlap
ChIP K-562_EPZ GSE129380.IRF1.K-562_EPZ 327 bp overlap
ChIP K562 ENCFF277KTJ 561 bp overlap
IRF2 2 datasets
Motif DE_36h DE_36h-IRF2_MA0051.2 16 bp overlap
Motif DE_36h DE_36h-IRF2_MA0051.2 16 bp overlap
IRF3 1 dataset
Motif DE_36h DE_36h-IRF3_MA1418.2 17 bp overlap
IRF4 6 datasets
ChIP B-cell GSE142493.IRF4.B-cell 319 bp overlap
ChIP BC-3 GSE132777.IRF4.BC-3 340 bp overlap
Motif DE_36h DE_36h-IRF4_MA1419.2 14 bp overlap
ChIP NCI-H929 GSE56857.IRF4.NCI-H929 96 bp overlap
ChIP NCI-H929 GSE142493.IRF4.NCI-H929 90 bp overlap
ChIP U266 GSE142493.IRF4.U266 192 bp overlap
IRF5 1 dataset
Motif DE_36h DE_36h-IRF5_MA1420.1 14 bp overlap
IRF6 1 dataset
Motif DE_36h DE_36h-IRF6_MA1509.1 9 bp overlap
IRF7 1 dataset
Motif DE_36h DE_36h-IRF7_MA0772.2 13 bp overlap
IRF8 1 dataset
Motif DE_36h DE_36h-IRF8_MA0652.2 13 bp overlap
IRF9 1 dataset
Motif DE_36h DE_36h-IRF9_MA0653.1 15 bp overlap
Irf1 1 dataset
Motif DE_36h DE_36h-Irf1_MA0050.4 11 bp overlap
JUN 4 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 430 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 369 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 519 bp overlap
ChIP Karpas-299 GSE151413.JUN.Karpas-299 245 bp overlap
JUNB 2 datasets
ChIP GM12878 ENCFF667EJQ 250 bp overlap
ChIP GM12878 ENCSR897MMC.JUNB.GM12878 196 bp overlap
JUND 1 dataset
ChIP GM12878 ENCSR000EYV.JUND.GM12878 213 bp overlap
KDM1A 2 datasets
ChIP NCI-H526_DMSO GSE66297.KDM1A.NCI-H526_DMSO 155 bp overlap
ChIP pancreatic-progenitor_PP2-KDM1A-inh GSE104840.KDM1A.pancreatic-progenitor_PP2-KDM1A-inh 205 bp overlap
KLF13 1 dataset
Motif DE_36h DE_36h-KLF13_MA0657.2 17 bp overlap
KLF16 1 dataset
Motif DE_36h DE_36h-KLF16_MA0741.1 11 bp overlap
KLF3 1 dataset
Motif DE_36h DE_36h-KLF3_MA1516.2 10 bp overlap
KMT2A 1 dataset
ChIP HEK293T_N-term_shCtrl GSE90762.KMT2A.HEK293T_N-term_shCtrl 276 bp overlap
MAFB 1 dataset
ChIP islet ERP004003.MAFB.islet 342 bp overlap
MAX::MYC 2 datasets
Motif DE_12h DE_12h-MAXMYC_MA0059.2 10 bp overlap
Motif DE_36h DE_36h-MAXMYC_MA0059.2 10 bp overlap
MEF2A 1 dataset
ChIP GM12878 ENCSR000BKB.MEF2A.GM12878 201 bp overlap
MEF2C 1 dataset
ChIP GM12878 ENCSR000BNG.MEF2C.GM12878 152 bp overlap
MEIS1 1 dataset
Motif DE_36h DE_36h-MEIS1_MA0498.3 5 bp overlap
MGA::EVX1 2 datasets
Motif DE_12h DE_12h-MGAEVX1_MA1960.2 11 bp overlap
Motif DE_36h DE_36h-MGAEVX1_MA1960.2 11 bp overlap
MXI1 2 datasets
Motif DE_12h DE_12h-MXI1_MA1108.3 6 bp overlap
Motif DE_36h DE_36h-MXI1_MA1108.3 6 bp overlap
MYC 1 dataset
ChIP MM1-S_DMSO GSE36354.MYC.MM1-S_DMSO 175 bp overlap
MYCN 1 dataset
ChIP LNCaP_DHT GSE117304.MYCN.LNCaP_DHT 287 bp overlap
Mafg 1 dataset
Motif DE_36h DE_36h-Mafg_MA0659.4 12 bp overlap
NANOG 1 dataset
ChIP hESC GSE18292.NANOG.hESC 106 bp overlap
NHLH1 1 dataset
Motif DE_36h DE_36h-NHLH1_MA0048.3 9 bp overlap
NKX3-1 1 dataset
ChIP islet ERP004003.NKX3-1.islet 175 bp overlap
Nkx2-1 1 dataset
Motif DE_36h DE_36h-Nkx2-1_MA1994.2 7 bp overlap
OSR2 1 dataset
ChIP HEK293 ENCSR324LTM.OSR2.HEK293 247 bp overlap
Olig2 1 dataset
Motif DE_36h DE_36h-Olig2_MA1997.2 6 bp overlap
PBX3 1 dataset
Motif DE_36h DE_36h-PBX3_MA1114.2 11 bp overlap
PKNOX1 2 datasets
Motif DE_36h DE_36h-PKNOX1_MA0782.3 10 bp overlap
ChIP GM12878 ENCSR711XNY.PKNOX1.GM12878 353 bp overlap
POU4F1 1 dataset
Motif DE_36h DE_36h-POU4F1_MA0790.2 12 bp overlap
POU4F2 2 datasets
Motif DE_36h DE_36h-POU4F2_MA0683.2 15 bp overlap
ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 132 bp overlap
POU4F3 1 dataset
Motif DE_36h DE_36h-POU4F3_MA0791.2 12 bp overlap
Ptf1A 1 dataset
Motif DE_36h DE_36h-Ptf1A_MA1619.2 8 bp overlap
RARB 1 dataset
Motif DE_36h DE_36h-RARB_MA1552.2 13 bp overlap
RARG 1 dataset
Motif DE_36h DE_36h-RARG_MA1553.2 13 bp overlap
RXRB 1 dataset
Motif DE_36h DE_36h-RXRB_MA1555.1 14 bp overlap
RXRG 1 dataset
Motif DE_36h DE_36h-RXRG_MA1556.1 14 bp overlap
Rhox11 1 dataset
Motif DE_36h DE_36h-Rhox11_MA0629.2 9 bp overlap
SFPQ 1 dataset
ChIP LTAD_DHT-1nM GSE94577.SFPQ.LTAD_DHT-1nM 283 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 323 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 853 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 664 bp overlap
SMAD2_3 4 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 629 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 936 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 606 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 629 bp overlap
SOX10 1 dataset
Motif DE_36h DE_36h-SOX10_MA0442.3 6 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 336 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 345 bp overlap
SP3 1 dataset
Motif DE_36h DE_36h-SP3_MA0746.3 11 bp overlap
SP8 1 dataset
Motif DE_36h DE_36h-SP8_MA0747.2 11 bp overlap
SPI1 2 datasets
ChIP CTV-1_FLAG_15perc GSE128835.SPI1.CTV-1_FLAG_15perc 205 bp overlap
ChIP K-562 GSE70482.SPI1.K-562 176 bp overlap
SRF 1 dataset
ChIP GM12878 ENCFF878IIX 314 bp overlap
SUPT5H 1 dataset
ChIP HCT-116_pThr806 GSE138548.SUPT5H.HCT-116_pThr806 943 bp overlap
SUPT6H 1 dataset
ChIP HCT-116 GSE130509.SUPT6H.HCT-116 280 bp overlap
Stat2 1 dataset
Motif DE_36h DE_36h-Stat2_MA1623.2 10 bp overlap
T 2 datasets
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 188 bp overlap
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 420 bp overlap
TAL1 2 datasets
ChIP K-562_dCas9-LSD1 GSE132212.TAL1.K-562_dCas9-LSD1 185 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.TAL1.K-562_enCRISPRi-LK 180 bp overlap
TAL1::TCF3 2 datasets
Motif DE_12h DE_12h-TAL1TCF3_MA0091.2 10 bp overlap
Motif DE_36h DE_36h-TAL1TCF3_MA0091.2 10 bp overlap
TBP 1 dataset
Motif DE_36h DE_36h-TBP_MA0108.3 7 bp overlap
TBX21 2 datasets
Motif DE_36h DE_36h-TBX21_MA0690.3 10 bp overlap
ChIP GM12878 ENCSR739IHN.TBX21.GM12878 299 bp overlap
TBX5 3 datasets
ChIP G296S GSE85628.TBX5.G296S 287 bp overlap
ChIP G296S_2 GSE85628.TBX5.G296S_2 287 bp overlap
ChIP cardiomyocyte_5 GSE85628.TBX5.cardiomyocyte_5 351 bp overlap
TCF21 2 datasets
Motif DE_12h DE_12h-TCF21_MA1568.2 10 bp overlap
Motif DE_36h DE_36h-TCF21_MA1568.2 10 bp overlap
TCF7L1 1 dataset
Motif DE_36h DE_36h-TCF7L1_MA1421.1 12 bp overlap
TCF7L2 2 datasets
Motif DE_36h DE_36h-TCF7L2_MA0523.2 9 bp overlap
Motif DE_36h DE_36h-TCF7L2_MA0523.2 9 bp overlap
TFAP4 3 datasets
Motif DE_12h DE_12h-TFAP4_MA1570.1 10 bp overlap
Motif DE_36h DE_36h-TFAP4_MA0691.1 10 bp overlap
Motif DE_36h DE_36h-TFAP4_MA1570.1 10 bp overlap
TFCP2 1 dataset
Motif DE_36h DE_36h-TFCP2_MA1968.2 9 bp overlap
TP73 1 dataset
Motif DE_36h DE_36h-TP73_MA0861.2 16 bp overlap
Tbx6 1 dataset
Motif DE_36h DE_36h-Tbx6_MA1567.3 9 bp overlap
Tcf12 1 dataset
Motif DE_36h DE_36h-Tcf12_MA0521.3 6 bp overlap
Twist2 1 dataset
Motif DE_36h DE_36h-Twist2_MA0633.3 6 bp overlap
YY1 1 dataset
ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 545 bp overlap
ZBED1 2 datasets
Motif DE_12h DE_12h-ZBED1_MA0749.2 12 bp overlap
Motif DE_36h DE_36h-ZBED1_MA0749.2 12 bp overlap
ZNF24 1 dataset
Motif DE_36h DE_36h-ZNF24_MA1124.1 13 bp overlap
ZNF317 1 dataset
Motif DE_36h DE_36h-ZNF317_MA1593.2 8 bp overlap
ZNF331 1 dataset
Motif DE_36h DE_36h-ZNF331_MA1726.2 10 bp overlap
ZNF335 2 datasets
ChIP HEK293 ENCFF784SLD 721 bp overlap
ChIP HEK293 ENCSR328SUD.ZNF335.HEK293 340 bp overlap
ZNF682 1 dataset
Motif DE_36h DE_36h-ZNF682_MA1599.2 11 bp overlap