chr3 : 171,621,164 – 171,621,387
223 bp 103 TFs 0 linked genes
This 223 bp open chromatin element has no linked target genes and is bound by 103 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:171,616,164 – 171,626,387
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
103 transcription factors
Source
Cell type
ARID1A 2 datasets
ChIP 12Z GSE129781.ARID1A.12Z 139 bp overlap
ChIP endometrial-epithelial-cells GSE106660.ARID1A.endometrial-epithelial-cells 223 bp overlap
ARID1B 1 dataset
ChIP K-562 ENCSR822CCM.ARID1B.K-562 223 bp overlap
ATF3 1 dataset
ChIP HCT-116_CAMP GSE74355.ATF3.HCT-116_CAMP 179 bp overlap
BCL11B 1 dataset
ChIP HEK293 ENCSR770PQN.BCL11B.HEK293 213 bp overlap
CBFA2T2 2 datasets
ChIP K-562 ENCSR699PVC.CBFA2T2.K-562 223 bp overlap
ChIP K562 ENCFF963TXY 223 bp overlap
CBFA2T3 2 datasets
ChIP K-562 ENCSR697YLJ.CBFA2T3.K-562 223 bp overlap
ChIP K562 ENCFF673OEZ 209 bp overlap
CDK7 1 dataset
ChIP SK-MEL-147 GSE45984.CDK7.SK-MEL-147 223 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 223 bp overlap
CREM 1 dataset
ChIP K-562 ENCSR077DKV.CREM.K-562 129 bp overlap
CTBP1 1 dataset
ChIP HEK293T ENCFF003PDY 223 bp overlap
EGR2 1 dataset
ChIP HEK293 ENCFF336LFH 223 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 223 bp overlap
EP300 2 datasets
ChIP Ishikawa ENCFF364ZWT 223 bp overlap
ChIP Ishikawa ENCSR000BUE.EP300.Ishikawa 145 bp overlap
ESR1 5 datasets
ChIP Ishikawa ENCSR000BIY.ESR1.Ishikawa 173 bp overlap
ChIP Ishikawa ENCSR000BKL.ESR1.Ishikawa 121 bp overlap
ChIP Ishikawa ENCSR000BQR.ESR1.Ishikawa 99 bp overlap
ChIP Ishikawa_M1-9-1 GSE147141.ESR1.Ishikawa_M1-9-1 208 bp overlap
ChIP Ishikawa_M2-5 GSE147141.ESR1.Ishikawa_M2-5 161 bp overlap
ESRRG 1 dataset
ChIP cardiomyocyte GSE113760.ESRRG.cardiomyocyte 195 bp overlap
FLI1 4 datasets
ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 207 bp overlap
ChIP A-673_2_KRAB_eSOX2_1 GSE106914.FLI1.A-673_2_KRAB_eSOX2_1 194 bp overlap
ChIP A-673_D14 GSE129155.FLI1.A-673_D14 194 bp overlap
ChIP A-673_D17 GSE129155.FLI1.A-673_D17 223 bp overlap
FOS 1 dataset
ChIP myometrium_PT967 GSE128230.FOS.myometrium_PT967 194 bp overlap
FOSL1 2 datasets
ChIP HCT-116 ENCSR000BTE.FOSL1.HCT-116 156 bp overlap
ChIP K-562 ENCSR239ZLZ.FOSL1.K-562 137 bp overlap
FOSL2 3 datasets
ChIP NPC_K755R-pos GSE122631.FOSL2.NPC_K755R-pos 223 bp overlap
ChIP NPC_R1159Q GSE122631.FOSL2.NPC_R1159Q 208 bp overlap
ChIP hESC GSE69539.FOSL2.hESC 214 bp overlap
FOXA2 1 dataset
ChIP DE DE-FOXA2-1 223 bp overlap
GATA1 5 datasets
ChIP CD34_Day7_30min GSE104676.GATA1.CD34_Day7_30min 91 bp overlap
ChIP HUDEP-2_30min GSE104676.GATA1.HUDEP-2_30min 58 bp overlap
ChIP K-562 GSE107726.GATA1.K-562 191 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 180 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 223 bp overlap
GATA2 3 datasets
ChIP ESF GSE108408.GATA2.ESF 223 bp overlap
ChIP dermal-fibroblast_alone GSE51025.GATA2.dermal-fibroblast_alone 173 bp overlap
ChIP primary-endometrial-stromal-cell_IVD_P2 GSE145673.GATA2.primary-endometrial-stromal-cell_IVD_P2 218 bp overlap
GATA4 4 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.GATA4.BJ1-hTERT_FOXA2_GATA4_Coexp 181 bp overlap
ChIP DE DE-GATA4-1 223 bp overlap
ChIP DE DE-GATA4-2 223 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 223 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 223 bp overlap
ChIP DE DE-GATA6-2 223 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 223 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 223 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 223 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 223 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 223 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 223 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 223 bp overlap
GLI2 2 datasets
ChIP HEK293 ENCFF700EUN 188 bp overlap
ChIP HEK293 ENCSR978EQY.GLI2.HEK293 161 bp overlap
HDAC1 1 dataset
ChIP K-562_dilution-6-100 GSE140325.HDAC1.K-562_dilution-6-100 85 bp overlap
HDAC2 1 dataset
ChIP K-562 ENCSR893WSB.HDAC2.K-562 210 bp overlap
HIC1 2 datasets
ChIP HEK293 ENCFF252CFL 223 bp overlap
ChIP HEK293 ENCSR803GYT.HIC1.HEK293 223 bp overlap
IKZF3 2 datasets
ChIP HEK293 ENCFF518OXG 223 bp overlap
ChIP HEK293 ENCSR304AMN.IKZF3.HEK293 217 bp overlap
INSM2 1 dataset
ChIP HEK293 ENCSR382GSF.INSM2.HEK293 209 bp overlap
JUN 4 datasets
ChIP DE_D2 S02-DE-d2-JUN-exp1 223 bp overlap
ChIP DE_D2 S54-DE-d2-JUN-exp2 166 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 214 bp overlap
ChIP myometrium_PT967 GSE128230.JUN.myometrium_PT967 61 bp overlap
JUNB 1 dataset
ChIP K-562 ENCSR000DJY.JUNB.K-562 190 bp overlap
KDM1A 4 datasets
ChIP K-562 ENCSR360HRA.KDM1A.K-562 223 bp overlap
ChIP K-562 ENCSR908CMW.KDM1A.K-562 223 bp overlap
ChIP K562 ENCFF128TYE 223 bp overlap
ChIP K562 ENCFF133OLU 223 bp overlap
KLF8 1 dataset
ChIP HEK293 ENCSR635NOQ.KLF8.HEK293 148 bp overlap
MAX 1 dataset
ChIP Ishikawa ENCSR000BTY.MAX.Ishikawa 125 bp overlap
MED1 1 dataset
ChIP HCT-116 GSE121798.MED1.HCT-116 135 bp overlap
MED12 4 datasets
ChIP leiomyoma_PT967 GSE128230.MED12.leiomyoma_PT967 111 bp overlap
ChIP myometrium_PT1063 GSE128230.MED12.myometrium_PT1063 59 bp overlap
ChIP myometrium_PT916 GSE128230.MED12.myometrium_PT916 148 bp overlap
ChIP myometrium_PT967 GSE128230.MED12.myometrium_PT967 72 bp overlap
MRTFB 1 dataset
ChIP A-673-clone-Asp114 GSE92738.MRTFB.A-673-clone-Asp114 223 bp overlap
MTA2 1 dataset
ChIP RH4 GSE155861.MTA2.RH4 223 bp overlap
NFIC 1 dataset
ChIP Ishikawa ENCSR000BUT.NFIC.Ishikawa 195 bp overlap
NR2F2 2 datasets
ChIP K-562 ENCSR000BRS.NR2F2.K-562 136 bp overlap
ChIP uterus_STROMA_ENDOMETRIUM GSE52008.NR2F2.uterus_STROMA_ENDOMETRIUM 165 bp overlap
NR3C1 1 dataset
ChIP Ishikawa ENCSR000BJC.NR3C1.Ishikawa 158 bp overlap
OSR2 1 dataset
ChIP HEK293 ENCSR324LTM.OSR2.HEK293 130 bp overlap
PATZ1 1 dataset
ChIP HEK293 ENCSR966ULI.PATZ1.HEK293 220 bp overlap
PGR 1 dataset
ChIP leiomyoma_RU486 GSE40724.PGR.leiomyoma_RU486 214 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 223 bp overlap
PRDM6 2 datasets
ChIP HEK293 ENCFF283AJL 223 bp overlap
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 223 bp overlap
RAD21 1 dataset
ChIP GP5D GSE51234.RAD21.GP5D 169 bp overlap
RBBP4 2 datasets
ChIP RH5 GSE155861.RBBP4.RH5 141 bp overlap
ChIP SCMC GSE155861.RBBP4.SCMC 223 bp overlap
RXR 1 dataset
ChIP macrophage ERP008801.RXR.macrophage 194 bp overlap
SCRT1 2 datasets
ChIP HEK293 ENCFF513YVP 182 bp overlap
ChIP HEK293 ENCSR605MGM.SCRT1.HEK293 223 bp overlap
SCRT2 2 datasets
ChIP HEK293 ENCFF711QQB 87 bp overlap
ChIP HEK293 ENCFF711QQB 135 bp overlap
SIX2 1 dataset
ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 160 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 223 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 223 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 223 bp overlap
SMARCA2 4 datasets
ChIP NPC_K755R-pos GSE122631.SMARCA2.NPC_K755R-pos 223 bp overlap
ChIP NPC_K755R-siCT GSE122631.SMARCA2.NPC_K755R-siCT 126 bp overlap
ChIP NPC_R1159Q GSE122631.SMARCA2.NPC_R1159Q 161 bp overlap
ChIP NPC_R1159Q_AM GSE122631.SMARCA2.NPC_R1159Q_AM 223 bp overlap
SMARCA4 14 datasets
ChIP 501-mel_SHMITF GSE61965.SMARCA4.501-mel_SHMITF 85 bp overlap
ChIP A-549_AG15677 GSE132290.SMARCA4.A-549_AG15677 151 bp overlap
ChIP A-549_AG15678 GSE132290.SMARCA4.A-549_AG15678 109 bp overlap
ChIP A-549_AG15688 GSE132290.SMARCA4.A-549_AG15688 206 bp overlap
ChIP A-549_AG15721 GSE132290.SMARCA4.A-549_AG15721 111 bp overlap
ChIP A-549_AG15722 GSE132290.SMARCA4.A-549_AG15722 76 bp overlap
ChIP A-549_AG15725 GSE132290.SMARCA4.A-549_AG15725 129 bp overlap
ChIP HS-SY-2_HA-tagged GSE108926.SMARCA4.HS-SY-2_HA-tagged 223 bp overlap
ChIP NPC_K755R-siAP GSE122631.SMARCA4.NPC_K755R-siAP 208 bp overlap
ChIP NPC_K755R-siCT GSE122631.SMARCA4.NPC_K755R-siCT 223 bp overlap
ChIP TTC-1240 GSE124903.SMARCA4.TTC-1240 194 bp overlap
ChIP TTC-1240_R377H GSE124903.SMARCA4.TTC-1240_R377H 223 bp overlap
ChIP TTC-1240_SMARCB1-FL GSE124903.SMARCA4.TTC-1240_SMARCB1-FL 223 bp overlap
ChIP endometrial-epithelial-cells_KO GSE106660.SMARCA4.endometrial-epithelial-cells_KO 203 bp overlap
SMARCB1 1 dataset
ChIP hiPSC GSE124903.SMARCB1.hiPSC 200 bp overlap
SMARCC1 3 datasets
ChIP DE_D1 S15-DE-d1-BAF155-exp1 217 bp overlap
ChIP SK-N-MC GSE94275.SMARCC1.SK-N-MC 223 bp overlap
ChIP TTC-1240_R377H GSE124903.SMARCC1.TTC-1240_R377H 198 bp overlap
SMC3 1 dataset
ChIP GP5D GSE51234.SMC3.GP5D 223 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 178 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 203 bp overlap
SOX2 1 dataset
ChIP HNSC GSE69479.SOX2.HNSC 223 bp overlap
SP5_Zebrafish 1 dataset
ChIP HEK293_Zebrafish_dDBD GSE121316.SP5_Zebrafish.HEK293_Zebrafish_dDBD 154 bp overlap
SP7 2 datasets
ChIP HEK293 ENCFF733RBE 223 bp overlap
ChIP HEK293 ENCSR468IJT.SP7.HEK293 223 bp overlap
STAT3 1 dataset
ChIP MDA-MB-157_EtOH GSE85579.STAT3.MDA-MB-157_EtOH 179 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 194 bp overlap
TAL1 4 datasets
ChIP K-562 GSE107726.TAL1.K-562 211 bp overlap
ChIP K-562_enCRISPRi-KL GSE132212.TAL1.K-562_enCRISPRi-KL 142 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.TAL1.K-562_enCRISPRi-LK 159 bp overlap
ChIP ProEs GSE59087.TAL1.ProEs 133 bp overlap
TCF12 1 dataset
ChIP K-562 ENCSR744WOO.TCF12.K-562 184 bp overlap
TCF3 1 dataset
ChIP K-562 ENCSR970OJY.TCF3.K-562 150 bp overlap
TEAD4 4 datasets
ChIP HEK293_siCtrl GSE130135.TEAD4.HEK293_siCtrl 179 bp overlap
ChIP HEK293_siE1A GSE130135.TEAD4.HEK293_siE1A 211 bp overlap
ChIP Ishikawa ENCFF772OTG 223 bp overlap
ChIP Ishikawa ENCSR000BSW.TEAD4.Ishikawa 221 bp overlap
TFAP4 1 dataset
ChIP DLD-1 GSE46935.TFAP4.DLD-1 223 bp overlap
TRIM28 4 datasets
ChIP HEK293 ENCFF582MWI 223 bp overlap
ChIP HEK293 ENCSR000EUZ.TRIM28.HEK293 222 bp overlap
ChIP HEK293 ENCSR618HNF.TRIM28.HEK293 223 bp overlap
ChIP U2OS ENCSR000EYC.TRIM28.U2OS 223 bp overlap
USF1 5 datasets
ChIP HCT-116 ENCSR000BVK.USF1.HCT-116 167 bp overlap
ChIP Ishikawa ENCFF728IEG 210 bp overlap
ChIP Ishikawa ENCSR000BSX.USF1.Ishikawa 152 bp overlap
ChIP K-562 ENCSR000BKT.USF1.K-562 197 bp overlap
ChIP K562 ENCFF633EZB 223 bp overlap
USF2 2 datasets
ChIP IMR-90 ENCFF438KUN 205 bp overlap
ChIP IMR-90 ENCSR513UQG.USF2.IMR-90 164 bp overlap
YY1 2 datasets
ChIP Hep-G2_NC GSE120104.YY1.Hep-G2_NC 204 bp overlap
ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 223 bp overlap
YY1AP1 1 dataset
ChIP HEK293_siCtrl GSE130135.YY1AP1.HEK293_siCtrl 186 bp overlap
ZBTB17 1 dataset
ChIP HEK293 ENCFF865LIO 223 bp overlap
ZBTB44 2 datasets
ChIP HEK293 ENCFF560VPN 223 bp overlap
ChIP HEK293 ENCSR076STQ.ZBTB44.HEK293 184 bp overlap
ZBTB8A 2 datasets
ChIP HEK293 ENCFF303WRD 223 bp overlap
ChIP HEK293 ENCSR481FEC.ZBTB8A.HEK293 223 bp overlap
ZEB2 2 datasets
ChIP HEK293 ENCFF847JIE 153 bp overlap
ChIP HEK293 ENCSR417VWF.ZEB2.HEK293 223 bp overlap
ZFHX2 1 dataset
ChIP HEK293 ENCFF167TUA 223 bp overlap
ZFP37 1 dataset
ChIP HEK293 ENCSR365GRX.ZFP37.HEK293 223 bp overlap
ZFP69B 2 datasets
ChIP HEK293 ENCFF942LFP 223 bp overlap
ChIP HEK293 ENCSR381VYR.ZFP69B.HEK293 193 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 223 bp overlap
ZNF189 2 datasets
ChIP HEK293 ENCFF638TIB 223 bp overlap
ChIP HEK293 ENCSR163RYW.ZNF189.HEK293 223 bp overlap
ZNF2 1 dataset
ChIP HEK293 ENCSR011CKE.ZNF2.HEK293 223 bp overlap
ZNF24 2 datasets
ChIP HEK293 ENCFF308WOW 223 bp overlap
ChIP HEK293 ENCSR984MDV.ZNF24.HEK293 223 bp overlap
ZNF34 1 dataset
ChIP HEK293 ENCSR727PIC.ZNF34.HEK293 172 bp overlap
ZNF35 1 dataset
ChIP HEK293 GSE76494.ZNF35.HEK293 173 bp overlap
ZNF362 1 dataset
ChIP HEK293 ENCSR715QNO.ZNF362.HEK293 223 bp overlap
ZNF366 2 datasets
ChIP HEK293 ENCFF799ATK 223 bp overlap
ChIP HEK293 ENCSR106EBH.ZNF366.HEK293 223 bp overlap
ZNF501 2 datasets
ChIP HEK293 ENCFF066RAQ 223 bp overlap
ChIP HEK293 ENCSR461ZJT.ZNF501.HEK293 223 bp overlap
ZNF549 1 dataset
ChIP HEK293 GSE76494.ZNF549.HEK293 160 bp overlap
ZNF558 2 datasets
ChIP HEK293 ENCFF994JWH 223 bp overlap
ChIP HEK293 ENCSR447ZTA.ZNF558.HEK293 213 bp overlap
ZNF574 1 dataset
ChIP HEK293 GSE76494.ZNF574.HEK293 153 bp overlap
ZNF596 2 datasets
ChIP HEK293 ENCFF854MGB 223 bp overlap
ChIP HEK293 ENCSR344SBD.ZNF596.HEK293 223 bp overlap
ZNF600 1 dataset
ChIP HEK293 ENCFF785JSX 223 bp overlap
ZNF629 2 datasets
ChIP HEK293 ENCFF096ELQ 223 bp overlap
ChIP HEK293 ENCSR351NON.ZNF629.HEK293 223 bp overlap
ZNF660 2 datasets
ChIP HEK293 ENCFF282RUS 223 bp overlap
ChIP HEK293 ENCSR283DOU.ZNF660.HEK293 223 bp overlap
ZNF843 2 datasets
ChIP HEK293 ENCFF241QRH 223 bp overlap
ChIP HEK293 ENCSR502KPJ.ZNF843.HEK293 223 bp overlap
ZSCAN16 1 dataset
ChIP HEK293 GSE76494.ZSCAN16.HEK293 155 bp overlap
ZSCAN30 1 dataset
ChIP HEK293 ENCSR768VNZ.ZSCAN30.HEK293 187 bp overlap
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