chrX : 47,573,672 47,573,925
253 bp 93 TFs 1 linked gene
This 253 bp open chromatin element is linked to TIMP1 and is bound by 93 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
TIMP1 8.5 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chrX:47,568,672 – 47,578,925
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
93 transcription factors
Source
Cell type
AGO1 7 datasets
ChIP Hep-G2 ENCSR555ZMV.AGO1.Hep-G2 242 bp overlap
ChIP Hep-G2 GSE120104.AGO1.Hep-G2 242 bp overlap
ChIP K-562 ENCSR641BSL.AGO1.K-562 253 bp overlap
ChIP K-562 GSE120104.AGO1.K-562 253 bp overlap
ChIP K562 ENCFF025NLP 91 bp overlap
ChIP K562 ENCFF025NLP 91 bp overlap
ChIP K562 ENCFF741BCI 80 bp overlap
AR 1 dataset
ChIP WTC11 ENCFF267GQJ 133 bp overlap
ARID2 1 dataset
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.ARID2.BIN-67_lentivirus-SMARCA4 253 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 253 bp overlap
BACH1 1 dataset
ChIP WA01 ENCSR000EBQ.BACH1.WA01 169 bp overlap
BCL11A 1 dataset
ChIP MCF-10A ERP003925.BCL11A.MCF-10A 139 bp overlap
BCOR 3 datasets
ChIP WA01 GSE104690.BCOR.WA01 241 bp overlap
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 253 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 231 bp overlap
BICRA 1 dataset
ChIP Mel270_K700E GSE124720.BICRA.Mel270_K700E 125 bp overlap
BRD2 4 datasets
ChIP SUM149PT_DMSO GSE131097.BRD2.SUM149PT_DMSO 253 bp overlap
ChIP SUM149PT_JQ1 GSE131097.BRD2.SUM149PT_JQ1 253 bp overlap
ChIP SUM149PT_R_DMSO GSE131097.BRD2.SUM149PT_R_DMSO 253 bp overlap
ChIP SUM149PT_R_JQ1 GSE131097.BRD2.SUM149PT_R_JQ1 236 bp overlap
BRD4 11 datasets
ChIP 402-91 GSE111253.BRD4.402-91 120 bp overlap
ChIP CD4_JG1 GSE33281.BRD4.CD4_JG1 167 bp overlap
ChIP HFOB_DIFF GSE82295.BRD4.HFOB_DIFF 62 bp overlap
ChIP HT29 GSE73319.BRD4.HT29 248 bp overlap
ChIP IMR-90_QUIES GSE74238.BRD4.IMR-90_QUIES 200 bp overlap
ChIP SUM149PT_DMSO GSE131097.BRD4.SUM149PT_DMSO 253 bp overlap
ChIP SUM149_DMSO GSE63581.BRD4.SUM149_DMSO 253 bp overlap
ChIP hESC GSE33281.BRD4.hESC 100 bp overlap
ChIP keratinocyte GSE140992.BRD4.keratinocyte 192 bp overlap
ChIP retina_AB1-FW20 GSE86981.BRD4.retina_AB1-FW20 62 bp overlap
ChIP retina_AB1-FW23 GSE86981.BRD4.retina_AB1-FW23 103 bp overlap
CHD1 1 dataset
ChIP HeLa-S3 ENCSR392EAA.CHD1.HeLa-S3 116 bp overlap
CHD2 2 datasets
ChIP HeLa-S3 ENCSR000ECP.CHD2.HeLa-S3 99 bp overlap
ChIP WA01 ENCSR000EBT.CHD2.WA01 234 bp overlap
CREB1 1 dataset
ChIP GM23338 ENCSR214ZAV.CREB1.GM23338 136 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF274GAT 80 bp overlap
DAXX 1 dataset
ChIP PC-3 GSE68647.DAXX.PC-3 72 bp overlap
DPF2 1 dataset
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.DPF2.BIN-67_lentivirus-SMARCA4 122 bp overlap
E2F7 2 datasets
ChIP IMR-90 GSE40343.E2F7.IMR-90 156 bp overlap
ChIP IMR-90_SENES_SHRB GSE40343.E2F7.IMR-90_SENES_SHRB 147 bp overlap
EHF 1 dataset
ChIP RWPE-1 GSE114241.EHF.RWPE-1 253 bp overlap
ELF1 1 dataset
ChIP GM12878 ENCSR000BMB.ELF1.GM12878 204 bp overlap
EP300 7 datasets
ChIP H1 ENCFF927IYK 253 bp overlap
ChIP HeLa-S3 ENCFF245KNK 132 bp overlap
ChIP HeLa-S3 ENCSR680OFU.EP300.HeLa-S3 139 bp overlap
ChIP PC-3 GSE147455.EP300.PC-3 122 bp overlap
ChIP WA01 ENCSR000BKK.EP300.WA01 223 bp overlap
ChIP WA01 ENCSR000AUQ.EP300.WA01 153 bp overlap
ChIP tibial nerve ENCFF346AYA 221 bp overlap
ERG 1 dataset
ChIP RWPE-1 GSE114241.ERG.RWPE-1 168 bp overlap
ETS1 2 datasets
ChIP cardiomyocyte_D0 GSE129986.ETS1.cardiomyocyte_D0 191 bp overlap
ChIP cardiomyocyte_D9 GSE129986.ETS1.cardiomyocyte_D9 213 bp overlap
FOXA2 1 dataset
ChIP BJ1-hTERT_FoxHnf1aCoExp GSE90454.FOXA2.BJ1-hTERT_FoxHnf1aCoExp 110 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 253 bp overlap
HCFC1 2 datasets
ChIP HeLa-S3 ENCFF159VGJ 195 bp overlap
ChIP HeLa-S3 ENCSR000ECH.HCFC1.HeLa-S3 59 bp overlap
HDAC2 1 dataset
ChIP WA01 ENCSR000AVB.HDAC2.WA01 242 bp overlap
JUN 3 datasets
ChIP DE_D1 S40-DE-d1-JUN-exp2 184 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 253 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 161 bp overlap
JUND 2 datasets
ChIP H1 ENCFF468JZD 221 bp overlap
ChIP WA01 ENCSR000BKP.JUND.WA01 241 bp overlap
KDM4A 1 dataset
ChIP WA01 ENCSR000AVC.KDM4A.WA01 214 bp overlap
KLF1 1 dataset
ChIP HEK293 ENCSR859BMR.KLF1.HEK293 97 bp overlap
KLF3 1 dataset
ChIP keratinocyte GSE140991.KLF3.keratinocyte 209 bp overlap
KLF5 1 dataset
ChIP GP5D GSE51234.KLF5.GP5D 62 bp overlap
KLF6 1 dataset
ChIP PDAC GSE64557.KLF6.PDAC 132 bp overlap
KMT2D 1 dataset
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.KMT2D.BIN-67_lentivirus-SMARCA4 204 bp overlap
MAML1 1 dataset
ChIP SCC_4h GSE156486.MAML1.SCC_4h 196 bp overlap
MAX 1 dataset
ChIP HeLa-S3 ENCSR000ECN.MAX.HeLa-S3 71 bp overlap
MAZ 5 datasets
ChIP HEK293 ENCSR290SSQ.MAZ.HEK293 253 bp overlap
ChIP HeLa-S3 ENCSR000ECL.MAZ.HeLa-S3 233 bp overlap
ChIP Hep-G2 ENCSR000EDN.MAZ.Hep-G2 157 bp overlap
ChIP IMR-90 ENCFF682IKN 239 bp overlap
ChIP IMR-90 ENCSR000EFF.MAZ.IMR-90 253 bp overlap
MED1 1 dataset
ChIP hESC_PRIMED GSE69646.MED1.hESC_PRIMED 253 bp overlap
MYF5 1 dataset
ChIP Rh18 GSE84628.MYF5.Rh18 195 bp overlap
NANOG 1 dataset
ChIP HUES-8 GSE109524.NANOG.HUES-8 175 bp overlap
NFIC 1 dataset
ChIP K562 ENCFF167YID 88 bp overlap
NR2F2 3 datasets
ChIP MCF-7_Veh GSE132432.NR2F2.MCF-7_Veh 138 bp overlap
ChIP liver ENCSR338MMB.NR2F2.liver 130 bp overlap
ChIP liver ENCSR168SMX.NR2F2.liver 138 bp overlap
NR3C1 3 datasets
ChIP BEAS-2B_TNF_IA1 GSE125623.NR3C1.BEAS-2B_TNF_IA1 253 bp overlap
ChIP BEAS-2B_Veh_IA1 GSE125623.NR3C1.BEAS-2B_Veh_IA1 253 bp overlap
ChIP BEAS-2B_shNR3C1_TNF_IA1 GSE125623.NR3C1.BEAS-2B_shNR3C1_TNF_IA1 253 bp overlap
PBX3 1 dataset
ChIP GM12878 ENCSR000BGR.PBX3.GM12878 253 bp overlap
PCGF1 1 dataset
ChIP WA01 GSE104690.PCGF1.WA01 253 bp overlap
PGR 1 dataset
ChIP myometrium_NP1 GSE137550.PGR.myometrium_NP1 253 bp overlap
PHF8 1 dataset
ChIP H1 ENCFF427UFV 194 bp overlap
POLR2A 5 datasets
ChIP GM23338 ENCFF450WCS 253 bp overlap
ChIP H1 ENCFF566JSR 128 bp overlap
ChIP H1 ENCFF833NJP 117 bp overlap
ChIP spleen ENCFF706IUS 135 bp overlap
ChIP vagina ENCFF384GAB 253 bp overlap
POLR2G 2 datasets
ChIP K562 ENCFF047BLG 253 bp overlap
ChIP K562 ENCFF648YPL 253 bp overlap
POU5F1 4 datasets
ChIP BG03 GSE21614.POU5F1.BG03 199 bp overlap
ChIP DE_D1 DED1-OCT4_Batch_II 253 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 253 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 168 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 253 bp overlap
PRDM10 1 dataset
ChIP HEK293 ENCFF145WQQ 95 bp overlap
RAD21 1 dataset
ChIP H1 ENCFF698EWO 212 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 188 bp overlap
RBFOX2 7 datasets
ChIP K-562 ENCSR822LBD.RBFOX2.K-562 253 bp overlap
ChIP K-562 GSE120104.RBFOX2.K-562 253 bp overlap
ChIP K562 ENCFF196WTG 169 bp overlap
ChIP K562 ENCFF196WTG 253 bp overlap
ChIP K562 ENCFF196WTG 240 bp overlap
ChIP K562 ENCFF967GRF 169 bp overlap
ChIP K562 ENCFF967GRF 253 bp overlap
RBM22 2 datasets
ChIP K-562 GSE120104.RBM22.K-562 253 bp overlap
ChIP K-562 ENCSR848AOP.RBM22.K-562 237 bp overlap
RBM39 1 dataset
ChIP K-562 ENCSR764OXF.RBM39.K-562 143 bp overlap
RBPJ 1 dataset
ChIP SCC_4h GSE156486.RBPJ.SCC_4h 253 bp overlap
RCOR1 3 datasets
ChIP HeLa-S3 ENCSR000ECM.RCOR1.HeLa-S3 110 bp overlap
ChIP IMR-90 ENCSR000EFG.RCOR1.IMR-90 78 bp overlap
ChIP keratinocyte_diff GSE57702.RCOR1.keratinocyte_diff 111 bp overlap
REST 2 datasets
ChIP H1 ENCFF429RUE 220 bp overlap
ChIP WA01 ENCSR000BHM.REST.WA01 182 bp overlap
SIN3A 2 datasets
ChIP WA01 ENCSR000EBO.SIN3A.WA01 141 bp overlap
ChIP WA01 ENCSR000BIS.SIN3A.WA01 178 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8 GSE109524.SMAD2-3.HUES-8 215 bp overlap
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 80 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 98 bp overlap
SMAD3 4 datasets
ChIP H69_4Veh GSE145250.SMAD3.H69_4Veh 253 bp overlap
ChIP H69_5TGF GSE145250.SMAD3.H69_5TGF 253 bp overlap
ChIP H69_5Veh GSE145250.SMAD3.H69_5Veh 253 bp overlap
ChIP SUM159PT GSE130364.SMAD3.SUM159PT 95 bp overlap
SMARCA2 1 dataset
ChIP NPC_K755R-pos GSE122631.SMARCA2.NPC_K755R-pos 156 bp overlap
SMARCA4 4 datasets
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4 100 bp overlap
ChIP MCF-10A GSE74716.SMARCA4.MCF-10A 253 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 253 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 201 bp overlap
SMARCB1 2 datasets
ChIP HeLa-S3 ENCSR000EDK.SMARCB1.HeLa-S3 55 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 208 bp overlap
SMARCC1 3 datasets
ChIP ESC S25-ESC-d0-BAF155-exp1 88 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 162 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 207 bp overlap
SMC1 1 dataset
ChIP HCAEC GSE101921.SMC1.HCAEC 237 bp overlap
SMC1A 1 dataset
ChIP primary-epidermal-keratinocyte GSE85526.SMC1A.primary-epidermal-keratinocyte 121 bp overlap
SMC3 2 datasets
ChIP GP5D GSE51234.SMC3.GP5D 68 bp overlap
ChIP HeLa-S3 ENCSR000ECS.SMC3.HeLa-S3 70 bp overlap
SP1 3 datasets
ChIP H1 ENCFF263FUH 253 bp overlap
ChIP HEK293 GSE76494.SP1.HEK293 97 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 243 bp overlap
TAF1 2 datasets
ChIP H1 ENCFF478SZO 253 bp overlap
ChIP WA01 ENCSR000BHO.TAF1.WA01 209 bp overlap
TBP 2 datasets
ChIP WA01 ENCSR000ECB.TBP.WA01 239 bp overlap
ChIP hESC_2h GSE122298.TBP.hESC_2h 124 bp overlap
TCF12 1 dataset
ChIP WA01 ENCSR000BIT.TCF12.WA01 220 bp overlap
TEAD1 6 datasets
ChIP H69 GSE62274.TEAD1.H69 253 bp overlap
ChIP HEK293_siE1A GSE130135.TEAD1.HEK293_siE1A 114 bp overlap
ChIP WTC11 ENCFF502QUV 253 bp overlap
ChIP adipocyte GSE140782.TEAD1.adipocyte 147 bp overlap
ChIP keratinocyte GSE138727.TEAD1.keratinocyte 253 bp overlap
ChIP pancreas_12D ERP008682.TEAD1.pancreas_12D 253 bp overlap
TEAD4 9 datasets
ChIP BJ_fibroblast GSE114367.TEAD4.BJ_fibroblast 253 bp overlap
ChIP BJ_fibroblast_CD13-neg GSE114367.TEAD4.BJ_fibroblast_CD13-neg 253 bp overlap
ChIP BJ_fibroblast_CD13-pos GSE114367.TEAD4.BJ_fibroblast_CD13-pos 253 bp overlap
ChIP ESC S26-ESC-d0-TEAD4-exp1 253 bp overlap
ChIP H1 ENCFF778PAX 184 bp overlap
ChIP SNU-216 GSE44416.TEAD4.SNU-216 228 bp overlap
ChIP T-47D_E2 GSE125594.TEAD4.T-47D_E2 159 bp overlap
ChIP WTC11 ENCFF114TZS 253 bp overlap
ChIP hESC GSE99202.TEAD4.hESC 236 bp overlap
TFAP2C 1 dataset
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 130 bp overlap
TFAP4 1 dataset
ChIP DLD-1 GSE46935.TFAP4.DLD-1 54 bp overlap
TP53 1 dataset
ChIP U2OS_NUT GSE46641.TP53.U2OS_NUT 103 bp overlap
TP63 1 dataset
ChIP foreskin GSE126390.TP63.foreskin 128 bp overlap
TRIM28 1 dataset
ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 153 bp overlap
YY1 1 dataset
ChIP NT2-D1 ENCSR000EXG.YY1.NT2-D1 68 bp overlap
YY1AP1 1 dataset
ChIP MCF-10A_DOX GSE115787.YY1AP1.MCF-10A_DOX 238 bp overlap
ZBTB48 1 dataset
ChIP U2OS GSE96776.ZBTB48.U2OS 253 bp overlap
ZFX 1 dataset
ChIP HEK293T_FLAG GSE145160.ZFX.HEK293T_FLAG 164 bp overlap