chr21 : 42,930,003 – 42,930,342
339 bp 100 TFs 1 linked gene
This 339 bp open chromatin element is linked to ERVH48-1 and is bound by 100 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ERVH48-1 4.4 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr21:42,925,003 – 42,935,342
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
100 transcription factors
Source
Cell type
ARID1B 2 datasets
ChIP K-562 ENCSR822CCM.ARID1B.K-562 339 bp overlap
ChIP K562 ENCFF938UXQ 339 bp overlap
ATF1 3 datasets
ChIP K-562 ENCSR091GVJ.ATF1.K-562 339 bp overlap
ChIP K562 ENCFF817JQF 339 bp overlap
ChIP K562 ENCFF817JQF 317 bp overlap
ATF4 1 dataset
ChIP K-562 ENCSR145TSJ.ATF4.K-562 54 bp overlap
ATF7 1 dataset
ChIP K-562 ENCSR972ZBV.ATF7.K-562 339 bp overlap
BCL11A 1 dataset
ChIP CD34_Day7_60min GSE104676.BCL11A.CD34_Day7_60min 71 bp overlap
BRD3 2 datasets
ChIP K-562_iBET-BD2-IFNG GSE138084.BRD3.K-562_iBET-BD2-IFNG 119 bp overlap
ChIP K-562_iBET-IFNG GSE138084.BRD3.K-562_iBET-IFNG 238 bp overlap
BRD4 4 datasets
ChIP K-562_DMSO GSE99178.BRD4.K-562_DMSO 265 bp overlap
ChIP K-562_JQ1_6h GSE99178.BRD4.K-562_JQ1_6h 269 bp overlap
ChIP K-562_iBET-BD2-IFNG GSE138084.BRD4.K-562_iBET-BD2-IFNG 187 bp overlap
ChIP K-562_iBET-IFNG GSE138084.BRD4.K-562_iBET-IFNG 221 bp overlap
CBFA2T2 2 datasets
ChIP K-562 ENCSR699PVC.CBFA2T2.K-562 289 bp overlap
ChIP K562 ENCFF963TXY 225 bp overlap
CBFA2T3 3 datasets
ChIP K-562 ENCSR697YLJ.CBFA2T3.K-562 339 bp overlap
ChIP K-562 GSE142227.CBFA2T3.K-562 311 bp overlap
ChIP K562 ENCFF673OEZ 310 bp overlap
CEBPD 1 dataset
ChIP K-562 ENCSR000BVY.CEBPD.K-562 233 bp overlap
CEBPG 2 datasets
ChIP K562 ENCFF783ADE 120 bp overlap
ChIP K562 ENCFF956TPS 92 bp overlap
CREM 1 dataset
ChIP K562 ENCFF180STA 215 bp overlap
CTBP1 2 datasets
ChIP K-562 ENCSR201NQZ.CTBP1.K-562 339 bp overlap
ChIP K562 ENCFF403WPG 339 bp overlap
CTCF 3 datasets
ChIP K-562 ENCSR000DMA.CTCF.K-562 118 bp overlap
ChIP K-562_14376 GSE131349.CTCF.K-562_14376 97 bp overlap
ChIP K562 ENCFF082GOI 185 bp overlap
CUX1 1 dataset
ChIP K562 ENCFF057AIX 335 bp overlap
DPF2 3 datasets
ChIP K-562 ENCSR219BXP.DPF2.K-562 339 bp overlap
ChIP K562 ENCFF739JDE 144 bp overlap
ChIP K562 ENCFF775HUO 339 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 335 bp overlap
EP300 2 datasets
ChIP K-562 ENCSR000EGE.EP300.K-562 200 bp overlap
ChIP K562 ENCFF226VMS 236 bp overlap
EP400 1 dataset
ChIP K562 ENCFF850OZQ 170 bp overlap
ESR1 3 datasets
ChIP MCF-7_E2-40min-ERalpha GSE94023.ESR1.MCF-7_E2-40min-ERalpha 161 bp overlap
ChIP U2OS_E2 GSE26110.ESR1.U2OS_E2 164 bp overlap
ChIP VCaP_E2_ERA GSE43985.ESR1.VCaP_E2_ERA 138 bp overlap
FOSL1 1 dataset
ChIP K562 ENCFF455MKD 339 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 339 bp overlap
ChIP DE DE-FOXA2-2 339 bp overlap
FOXK2 1 dataset
ChIP K562 ENCFF851PFH 339 bp overlap
FOXM1 2 datasets
ChIP K-562 ENCSR429QPP.FOXM1.K-562 171 bp overlap
ChIP K562 ENCFF255RHV 295 bp overlap
FOXO1-PAX3 1 dataset
ChIP RH4_DMSO-6H GSE116344.FOXO1-PAX3.RH4_DMSO-6H 172 bp overlap
GABPA 2 datasets
ChIP K-562 ENCSR000BLO.GABPA.K-562 157 bp overlap
ChIP K562 ENCFF996TSW 228 bp overlap
GATA1 8 datasets
ChIP CD34_ERYTH_BMP GSE29194.GATA1.CD34_ERYTH_BMP 133 bp overlap
ChIP K-562 GSE107726.GATA1.K-562 339 bp overlap
ChIP K-562 ENCSR000EFT.GATA1.K-562 166 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 284 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 260 bp overlap
ChIP K562 ENCFF094CMK 211 bp overlap
ChIP erythroblast ENCSR000EXP.GATA1.erythroblast 247 bp overlap
ChIP erythroid_R3R4 GSE43625.GATA1.erythroid_R3R4 65 bp overlap
GATA2 8 datasets
ChIP K-562 ENCSR000DKA.GATA2.K-562 339 bp overlap
ChIP K-562 ENCSR000EWG.GATA2.K-562 265 bp overlap
ChIP K-562 ENCSR000BKM.GATA2.K-562 240 bp overlap
ChIP K562 ENCFF513FTZ 233 bp overlap
ChIP K562 ENCFF544PCK 205 bp overlap
ChIP K562 ENCFF830LLA 339 bp overlap
ChIP K562 ENCFF830LLA 321 bp overlap
ChIP SKH1 GSE87283.GATA2.SKH1 115 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 339 bp overlap
ChIP DE DE-GATA4-2 339 bp overlap
ChIP foregut GSE117136.GATA4.foregut 339 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 339 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 339 bp overlap
GATA6 14 datasets
ChIP DE DE-GATA6-1 339 bp overlap
ChIP DE DE-GATA6-2 339 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 339 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 339 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 339 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 339 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 339 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 339 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 339 bp overlap
ChIP foregut GSE117136.GATA6.foregut 304 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 289 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 284 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 320 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 339 bp overlap
GATAD2B 1 dataset
ChIP K562 ENCFF696VMK 309 bp overlap
GFI1B 1 dataset
ChIP K-562 ENCSR509GDT.GFI1B.K-562 161 bp overlap
HDAC1 5 datasets
ChIP K-562 ENCSR387UWP.HDAC1.K-562 339 bp overlap
ChIP K-562 ENCSR000AQF.HDAC1.K-562 173 bp overlap
ChIP K-562 ENCSR711VWL.HDAC1.K-562 255 bp overlap
ChIP K562 ENCFF928TKZ 325 bp overlap
ChIP K562 ENCFF968WBH 339 bp overlap
HDAC2 5 datasets
ChIP K-562 ENCSR075HTM.HDAC2.K-562 339 bp overlap
ChIP K-562 ENCSR893WSB.HDAC2.K-562 339 bp overlap
ChIP K-562 ENCSR000BMG.HDAC2.K-562 225 bp overlap
ChIP K562 ENCFF738SPU 205 bp overlap
ChIP K562 ENCFF744ALD 220 bp overlap
HMBOX1 3 datasets
ChIP K-562 ENCSR757IIU.HMBOX1.K-562 323 bp overlap
ChIP K562 ENCFF055GAZ 339 bp overlap
ChIP K562 ENCFF317JJX 339 bp overlap
IKZF1 2 datasets
ChIP K-562 ENCSR395HWC.IKZF1.K-562 339 bp overlap
ChIP K562 ENCFF771OHZ 259 bp overlap
IKZF3 1 dataset
ChIP HEK293 ENCSR304AMN.IKZF3.HEK293 312 bp overlap
ILF3 1 dataset
ChIP K-562 GSE103215.ILF3.K-562 339 bp overlap
JUN 3 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 339 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 339 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 339 bp overlap
JUNB 1 dataset
ChIP K-562 ENCSR000DJY.JUNB.K-562 275 bp overlap
JUND 2 datasets
ChIP K-562 ENCSR000EGN.JUND.K-562 249 bp overlap
ChIP K562 ENCFF830LVJ 224 bp overlap
KDM1A 7 datasets
ChIP K-562 ENCSR000ATX.KDM1A.K-562 278 bp overlap
ChIP K-562 ENCSR908CMW.KDM1A.K-562 224 bp overlap
ChIP K-562 ENCSR360HRA.KDM1A.K-562 187 bp overlap
ChIP K-562 GSE117944.KDM1A.K-562 135 bp overlap
ChIP K562 ENCFF128TYE 278 bp overlap
ChIP K562 ENCFF133OLU 257 bp overlap
ChIP K562 ENCFF934ZRG 326 bp overlap
LDB1 1 dataset
ChIP K-562 GSE142227.LDB1.K-562 339 bp overlap
MAX 2 datasets
ChIP K-562 ENCSR000EFV.MAX.K-562 242 bp overlap
ChIP K562 ENCFF524IJO 313 bp overlap
MAZ 1 dataset
ChIP K562 ENCFF333ZIV 223 bp overlap
MBD3 1 dataset
ChIP HEK293T GSE102945.MBD3.HEK293T 252 bp overlap
MED1 2 datasets
ChIP HCT-116_thaps GSE121798.MED1.HCT-116_thaps 129 bp overlap
ChIP K-562 GSE97661.MED1.K-562 151 bp overlap
MEIS2 2 datasets
ChIP K-562 ENCSR851BNE.MEIS2.K-562 339 bp overlap
ChIP K562 ENCFF320GSD 326 bp overlap
MLLT1 1 dataset
ChIP K562 ENCFF074XRJ 195 bp overlap
MNT 2 datasets
ChIP K562 ENCFF820IGH 339 bp overlap
ChIP K562 ENCFF820IGH 339 bp overlap
MTA1 1 dataset
ChIP K-562 ENCSR807BGP.MTA1.K-562 186 bp overlap
MTA2 3 datasets
ChIP K-562 ENCSR411UYA.MTA2.K-562 339 bp overlap
ChIP K-562 ENCSR113LAS.MTA2.K-562 331 bp overlap
ChIP K562 ENCFF880VZB 292 bp overlap
MTA3 2 datasets
ChIP K-562 ENCSR180NCY.MTA3.K-562 324 bp overlap
ChIP K-562 ENCSR914NEI.MTA3.K-562 242 bp overlap
NBN 1 dataset
ChIP K-562 ENCSR085QEV.NBN.K-562 339 bp overlap
NCAPH2 2 datasets
ChIP RMG-I GSE120058.NCAPH2.RMG-I 339 bp overlap
ChIP RMG-I_ARID1A-KO GSE120058.NCAPH2.RMG-I_ARID1A-KO 311 bp overlap
NCOA1 1 dataset
ChIP K562 ENCFF962VHQ 286 bp overlap
NCOR1 5 datasets
ChIP K-562 ENCSR798ILC.NCOR1.K-562 339 bp overlap
ChIP K-562 ENCSR910JAI.NCOR1.K-562 246 bp overlap
ChIP K562 ENCFF359DNT 339 bp overlap
ChIP K562 ENCFF788MPU 195 bp overlap
ChIP K562 ENCFF866HRM 221 bp overlap
NFE2 3 datasets
ChIP K-562 ENCSR000FCC.NFE2.K-562 104 bp overlap
ChIP K562 ENCFF163BSI 184 bp overlap
ChIP erythroid_R3R4 GSE43625.NFE2.erythroid_R3R4 60 bp overlap
NFIC 2 datasets
ChIP K-562 ENCSR796ITY.NFIC.K-562 231 bp overlap
ChIP K562 ENCFF167YID 116 bp overlap
NFYB 1 dataset
ChIP K-562 GSE26439.NFYB.K-562 212 bp overlap
NR2F2 1 dataset
ChIP K-562 ENCSR000BRS.NR2F2.K-562 217 bp overlap
NRF1 1 dataset
ChIP K562 ENCFF791UHF 63 bp overlap
ONECUT1 4 datasets
ChIP Hep-G2 ENCSR956OSX.ONECUT1.Hep-G2 241 bp overlap
ChIP HepG2 ENCFF243FIR 304 bp overlap
ChIP liver ERP002306.ONECUT1.liver 105 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.ONECUT1.pancreatic-progenitor_PP1 339 bp overlap
ONECUT2 1 dataset
ChIP AGS_Overexpression GSE113045.ONECUT2.AGS_Overexpression 172 bp overlap
PBX2 2 datasets
ChIP K-562 ENCSR263DFP.PBX2.K-562 322 bp overlap
ChIP K562 ENCFF286KMN 339 bp overlap
PDX1 3 datasets
ChIP hiPSC GSE125768.PDX1.hiPSC 291 bp overlap
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 247 bp overlap
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 339 bp overlap
PKNOX1 4 datasets
ChIP HEK293T ENCFF174WDB 332 bp overlap
ChIP HEK293T ENCSR233FAG.PKNOX1.HEK293T 284 bp overlap
ChIP K-562 ENCSR115SMW.PKNOX1.K-562 339 bp overlap
ChIP K562 ENCFF236IUS 339 bp overlap
POLR2A 1 dataset
ChIP K562 ENCFF514URW 265 bp overlap
RAD21 2 datasets
ChIP K-562 ENCSR000BKV.RAD21.K-562 117 bp overlap
ChIP K562 ENCFF634XYR 339 bp overlap
RCOR1 1 dataset
ChIP K562 ENCFF216EEJ 253 bp overlap
REST 4 datasets
ChIP K-562 ENCSR137ZMQ.REST.K-562 265 bp overlap
ChIP K-562 ENCSR000BMW.REST.K-562 188 bp overlap
ChIP K562 ENCFF430APM 157 bp overlap
ChIP K562 ENCFF688UKW 339 bp overlap
RNF2 2 datasets
ChIP K562 ENCFF653BQJ 286 bp overlap
ChIP K562 ENCFF653BQJ 186 bp overlap
SKIL 1 dataset
ChIP K562 ENCFF560QSF 181 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 339 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 339 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 245 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 332 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 339 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 202 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 339 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 310 bp overlap
SMAD4 1 dataset
ChIP K562 ENCFF628RBP 257 bp overlap
SMARCA4 3 datasets
ChIP K-562 ENCSR587OQL.SMARCA4.K-562 339 bp overlap
ChIP K-562 ENCSR643VTW.SMARCA4.K-562 317 bp overlap
ChIP K562 ENCFF506JCB 221 bp overlap
SMARCE1 2 datasets
ChIP K-562 ENCSR157TCS.SMARCE1.K-562 339 bp overlap
ChIP K562 ENCFF690CFF 136 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 251 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 336 bp overlap
SOX6 2 datasets
ChIP K-562 ENCSR788RSW.SOX6.K-562 339 bp overlap
ChIP K562 ENCFF059YCJ 250 bp overlap
SP1 1 dataset
ChIP K562 ENCFF088XXV 194 bp overlap
STAT5A 1 dataset
ChIP K562 ENCFF226BTJ 230 bp overlap
TAL1 15 datasets
ChIP CD34 GSE52924.TAL1.CD34 116 bp overlap
ChIP HSPC-CD34pos GSE93372.TAL1.HSPC-CD34pos 105 bp overlap
ChIP K-562 ENCSR106FRG.TAL1.K-562 339 bp overlap
ChIP K-562 GSE107726.TAL1.K-562 320 bp overlap
ChIP K-562 ENCSR000EHB.TAL1.K-562 243 bp overlap
ChIP K-562_MYO1D-Hub_KO GSE107726.TAL1.K-562_MYO1D-Hub_KO 183 bp overlap
ChIP K-562_MYO1D-Non-hub_KO GSE107726.TAL1.K-562_MYO1D-Non-hub_KO 223 bp overlap
ChIP K-562_dCas9-KRAB GSE132212.TAL1.K-562_dCas9-KRAB 278 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.TAL1.K-562_dCas9-LSD1 274 bp overlap
ChIP K-562_enCRISPRi-KL GSE132212.TAL1.K-562_enCRISPRi-KL 262 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.TAL1.K-562_enCRISPRi-LK 262 bp overlap
ChIP K-562_sgGal4 GSE132212.TAL1.K-562_sgGal4 218 bp overlap
ChIP K562 ENCFF620GMX 259 bp overlap
ChIP K562 ENCFF661CCK 185 bp overlap
ChIP ProEs GSE59087.TAL1.ProEs 202 bp overlap
TBL1XR1 1 dataset
ChIP K562 ENCFF899VEC 239 bp overlap
TCF12 4 datasets
ChIP K-562 ENCSR744WOO.TCF12.K-562 255 bp overlap
ChIP K-562 ENCSR189TRZ.TCF12.K-562 202 bp overlap
ChIP K562 ENCFF909RDY 286 bp overlap
ChIP K562 ENCFF931DJY 251 bp overlap
TCF3 2 datasets
ChIP K-562 ENCSR970OJY.TCF3.K-562 339 bp overlap
ChIP K562 ENCFF319QZT 196 bp overlap
TEAD1 1 dataset
ChIP K562 ENCFF254RJL 339 bp overlap
TEAD4 1 dataset
ChIP K562 ENCFF673NIK 177 bp overlap
TRIM24 3 datasets
ChIP K-562 ENCSR907MZR.TRIM24.K-562 318 bp overlap
ChIP K562 ENCFF284DKY 241 bp overlap
ChIP K562 ENCFF616RIL 318 bp overlap
USF1 1 dataset
ChIP K-562 ENCSR000BKT.USF1.K-562 276 bp overlap
XRCC5 3 datasets
ChIP K-562 GSE120104.XRCC5.K-562 104 bp overlap
ChIP K-562 ENCSR506KWJ.XRCC5.K-562 102 bp overlap
ChIP K562 ENCFF828QYP 299 bp overlap
ZBTB33 1 dataset
ChIP K-562 ENCSR876GXA.ZBTB33.K-562 118 bp overlap
ZBTB40 2 datasets
ChIP K-562 ENCSR237VLT.ZBTB40.K-562 324 bp overlap
ChIP K562 ENCFF521DSV 255 bp overlap
ZBTB7A 1 dataset
ChIP K-562 GSE103445.ZBTB7A.K-562 330 bp overlap
ZEB2 4 datasets
ChIP K-562 ENCSR322CFO.ZEB2.K-562 339 bp overlap
ChIP K-562 ENCSR004GKA.ZEB2.K-562 339 bp overlap
ChIP K562 ENCFF795CMH 306 bp overlap
ChIP K562 ENCFF975RXS 231 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 118 bp overlap
ZNF143 3 datasets
ChIP FLP143HA_T0 GSE39263.ZNF143.FLP143HA_T0 149 bp overlap
ChIP FLP143HA_T4 GSE39263.ZNF143.FLP143HA_T4 192 bp overlap
ChIP K562 ENCFF554TVF 339 bp overlap
ZNF175 2 datasets
ChIP HEK293 GSE76494.ZNF175.HEK293 152 bp overlap
ChIP K-562 ENCSR011PEI.ZNF175.K-562 193 bp overlap
ZNF18 1 dataset
ChIP HEK293 ENCFF066NGR 189 bp overlap
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