chr2 : 17,557,596 17,558,080
484 bp 97 TFs 0 linked genes
This 484 bp open chromatin element has no linked target genes and is bound by 97 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:17,552,596 – 17,563,080
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
97 transcription factors
Source
Cell type
AR 27 datasets
ChIP LHSAR_HOXB13 GSE56288.AR.LHSAR_HOXB13 183 bp overlap
ChIP LNCaP GSE110655.AR.LNCaP 239 bp overlap
ChIP LNCaP-abl GSE39459.AR.LNCaP-abl 117 bp overlap
ChIP LNCaP-clone-FGC_DHT-ABBV-075 GSE118247.AR.LNCaP-clone-FGC_DHT-ABBV-075 274 bp overlap
ChIP LNCaP_1F5_SIFOXA1 GSE30623.AR.LNCaP_1F5_SIFOXA1 232 bp overlap
ChIP LNCaP_SHFOXA1_R1881 GSE37345.AR.LNCaP_SHFOXA1_R1881 153 bp overlap
ChIP LNCaP_androgen-N_hypoxia-N GSE114732.AR.LNCaP_androgen-N_hypoxia-N 234 bp overlap
ChIP LNCaP_androgen-N_hypoxia-Y GSE114732.AR.LNCaP_androgen-N_hypoxia-Y 171 bp overlap
ChIP LNCaP_r1881 GSE94682.AR.LNCaP_r1881 285 bp overlap
ChIP LNCaP_sgCHD1 GSE117430.AR.LNCaP_sgCHD1 271 bp overlap
ChIP LNCaP_sgCtrl GSE117430.AR.LNCaP_sgCtrl 250 bp overlap
ChIP LTAD_siControl GSE94577.AR.LTAD_siControl 139 bp overlap
ChIP VCaP_DHAT_2H GSE28950.AR.VCaP_DHAT_2H 148 bp overlap
ChIP VCaP_DHT24H GSE58428.AR.VCaP_DHT24H 484 bp overlap
ChIP VCaP_DHT24H_SHFOXA1 GSE58428.AR.VCaP_DHT24H_SHFOXA1 484 bp overlap
ChIP VCaP_DHT24H_SHFOXP1 GSE58428.AR.VCaP_DHT24H_SHFOXP1 62 bp overlap
ChIP VCaP_DHT24H_SHFOXP1 GSE58428.AR.VCaP_DHT24H_SHFOXP1 137 bp overlap
ChIP VCaP_R1881 GSE32892.AR.VCaP_R1881 211 bp overlap
ChIP VCaP_R1881_30M GSE84432.AR.VCaP_R1881_30M 209 bp overlap
ChIP VCaP_R1881_4H GSE84432.AR.VCaP_R1881_4H 192 bp overlap
ChIP VCaP_SH1_DHT GSE79128.AR.VCaP_SH1_DHT 325 bp overlap
ChIP VCaP_shERG GSE110655.AR.VCaP_shERG 176 bp overlap
ChIP prostate-cancer_PDX_136 GSE130408.AR.prostate-cancer_PDX_136 167 bp overlap
ChIP prostate-cancer_PDX_167 GSE130408.AR.prostate-cancer_PDX_167 66 bp overlap
ChIP prostate-cancer_PDX_35 GSE130408.AR.prostate-cancer_PDX_35 204 bp overlap
ChIP prostate-cancer_PDX_58 GSE130408.AR.prostate-cancer_PDX_58 179 bp overlap
ChIP prostate-cancer_PDX_81 GSE130408.AR.prostate-cancer_PDX_81 131 bp overlap
ARID1A 1 dataset
ChIP HAP1 GSE108387.ARID1A.HAP1 278 bp overlap
ASH2L 5 datasets
ChIP Hep-G2 ENCSR508LMH.ASH2L.Hep-G2 430 bp overlap
ChIP HepG2 ENCFF207QHL 445 bp overlap
ChIP VCaP GSE60841.ASH2L.VCaP 172 bp overlap
ChIP VCaP_R1881 GSE60841.ASH2L.VCaP_R1881 150 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 225 bp overlap
ATF3 1 dataset
ChIP liver ENCSR480LIS.ATF3.liver 303 bp overlap
BAF155 1 dataset
ChIP VCaP_shERG GSE110655.BAF155.VCaP_shERG 175 bp overlap
BCL6 1 dataset
ChIP HepG2 ENCFF423EJH 372 bp overlap
BCOR 2 datasets
ChIP VCaP_EtOH GSE122572.BCOR.VCaP_EtOH 140 bp overlap
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 277 bp overlap
BRD4 1 dataset
ChIP HCT-15 GSE73319.BRD4.HCT-15 225 bp overlap
CDX2 2 datasets
ChIP LS180 GSE31939.CDX2.LS180 310 bp overlap
ChIP LS180_125 GSE31939.CDX2.LS180_125 295 bp overlap
CEBPA 1 dataset
ChIP Hep-G2 ERP000209.CEBPA.Hep-G2 172 bp overlap
CREB1 1 dataset
ChIP LNCaP-abl_SHFOXA1 GSE63034.CREB1.LNCaP-abl_SHFOXA1 358 bp overlap
CREM 1 dataset
ChIP WTC11 ENCFF209ZUE 342 bp overlap
CTBP2 1 dataset
ChIP WA01 ENCSR000EUO.CTBP2.WA01 233 bp overlap
ELF1 1 dataset
ChIP Hep-G2 ENCSR321VGW.ELF1.Hep-G2 136 bp overlap
EP300 1 dataset
ChIP Hep-G2 ENCSR000BLW.EP300.Hep-G2 218 bp overlap
ERG 3 datasets
ChIP VCaP_ETOH GSE49091.ERG.VCaP_ETOH 324 bp overlap
ChIP VCaP_R1881 GSE49091.ERG.VCaP_R1881 225 bp overlap
ChIP VCaP_SH3_DHT GSE79128.ERG.VCaP_SH3_DHT 229 bp overlap
ESR1 5 datasets
ChIP Ishikawa_C1-5 GSE147141.ESR1.Ishikawa_C1-5 461 bp overlap
ChIP Ishikawa_E2_D538G GSE132426.ESR1.Ishikawa_E2_D538G 428 bp overlap
ChIP Ishikawa_ETV4-KO1_Mili GSE129803.ESR1.Ishikawa_ETV4-KO1_Mili 220 bp overlap
ChIP Ishikawa_ETV4-KO2_Mili GSE129803.ESR1.Ishikawa_ETV4-KO2_Mili 172 bp overlap
ChIP Ishikawa_M1-9-1 GSE147141.ESR1.Ishikawa_M1-9-1 246 bp overlap
FOXA1 4 datasets
ChIP LNCaP_SHGATA2_R1881 GSE69043.FOXA1.LNCaP_SHGATA2_R1881 149 bp overlap
ChIP liver ERP002306.FOXA1.liver 158 bp overlap
ChIP prostate-cancer_PDX_136 GSE130408.FOXA1.prostate-cancer_PDX_136 222 bp overlap
ChIP prostate_P5_T GSE130408.FOXA1.prostate_P5_T 253 bp overlap
FOXA2 4 datasets
ChIP DE DE-FOXA2-1 368 bp overlap
ChIP DE DE-FOXA2-2 428 bp overlap
ChIP HepG2 ENCFF894AYY 379 bp overlap
ChIP liver ENCSR310NYI.FOXA2.liver 212 bp overlap
FOXP1 1 dataset
ChIP H9 GSE31006.FOXP1.H9 161 bp overlap
GABPA 1 dataset
ChIP VCaP_R1881 GSE49091.GABPA.VCaP_R1881 168 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 299 bp overlap
ChIP DE DE-GATA4-2 412 bp overlap
GATA6 10 datasets
ChIP DE DE-GATA6-1 290 bp overlap
ChIP DE DE-GATA6-2 450 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 438 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 416 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 484 bp overlap
ChIP ESO-26 GSE132680.GATA6.ESO-26 422 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 484 bp overlap
ChIP HUG1N GSE51936.GATA6.HUG1N 183 bp overlap
ChIP YCC-3 GSE51705.GATA6.YCC-3 131 bp overlap
ChIP YCC-3 GSE51705.GATA6.YCC-3 116 bp overlap
GATAD2A 1 dataset
ChIP HepG2 ENCFF252XNH 401 bp overlap
GMEB1 1 dataset
ChIP Hep-G2 ENCSR780OXL.GMEB1.Hep-G2 168 bp overlap
GTF2F1 1 dataset
ChIP Hep-G2 GSE120104.GTF2F1.Hep-G2 230 bp overlap
HIC1 1 dataset
ChIP HEK293 ENCSR803GYT.HIC1.HEK293 103 bp overlap
HIF1A 1 dataset
ChIP LNCaP_androgen-N_hypoxia-Y GSE114732.HIF1A.LNCaP_androgen-N_hypoxia-Y 155 bp overlap
HMG20A 1 dataset
ChIP HepG2 ENCFF599VWU 384 bp overlap
HNF4A 7 datasets
ChIP GP5D GSE51234.HNF4A.GP5D 269 bp overlap
ChIP Hep-G2 ERP000209.HNF4A.Hep-G2 148 bp overlap
ChIP IM95 GSE114018.HNF4A.IM95 272 bp overlap
ChIP LoVo_PHASES GSE51290.HNF4A.LoVo_PHASES 266 bp overlap
ChIP liver ENCFF354NRH 367 bp overlap
ChIP liver ENCFF449HPV 329 bp overlap
ChIP liver ERP002306.HNF4A.liver 317 bp overlap
HNF4G 2 datasets
ChIP liver ENCFF170YNZ 371 bp overlap
ChIP liver ENCSR297GII.HNF4G.liver 237 bp overlap
HOXB13 14 datasets
ChIP LNCaP GSE56288.HOXB13.LNCaP 178 bp overlap
ChIP prostate-cancer_PDX_167 GSE130408.HOXB13.prostate-cancer_PDX_167 153 bp overlap
ChIP prostate-cancer_PDX_170-2 GSE130408.HOXB13.prostate-cancer_PDX_170-2 138 bp overlap
ChIP prostate-cancer_PDX_70 GSE130408.HOXB13.prostate-cancer_PDX_70 223 bp overlap
ChIP prostate_2480_T GSE130408.HOXB13.prostate_2480_T 276 bp overlap
ChIP prostate_2483 GSE130408.HOXB13.prostate_2483 287 bp overlap
ChIP prostate_2483_T GSE130408.HOXB13.prostate_2483_T 280 bp overlap
ChIP prostate_2484 GSE130408.HOXB13.prostate_2484 265 bp overlap
ChIP prostate_P13_T GSE130408.HOXB13.prostate_P13_T 409 bp overlap
ChIP prostate_P19 GSE130408.HOXB13.prostate_P19 257 bp overlap
ChIP prostate_P23_T GSE130408.HOXB13.prostate_P23_T 186 bp overlap
ChIP prostate_P27_T GSE130408.HOXB13.prostate_P27_T 304 bp overlap
ChIP prostate_P29_T GSE130408.HOXB13.prostate_P29_T 191 bp overlap
ChIP prostate_P5_T GSE130408.HOXB13.prostate_P5_T 212 bp overlap
ISL1 1 dataset
ChIP SK-N-SH ENCFF285GEQ 74 bp overlap
JUN 2 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 275 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 405 bp overlap
JUND 5 datasets
ChIP GP5D GSE51234.JUND.GP5D 274 bp overlap
ChIP GP5D_SIRAD21 GSE51234.JUND.GP5D_SIRAD21 271 bp overlap
ChIP liver ENCFF007WWT 409 bp overlap
ChIP liver ENCFF007WWT 269 bp overlap
ChIP liver ENCSR837GTK.JUND.liver 343 bp overlap
KDM1A 1 dataset
ChIP NCI-H526_DMSO GSE66297.KDM1A.NCI-H526_DMSO 272 bp overlap
KLF16 1 dataset
ChIP HepG2 ENCFF969FFI 287 bp overlap
KLF5 1 dataset
ChIP ESO-26 GSE132680.KLF5.ESO-26 335 bp overlap
KMT2A 1 dataset
ChIP Hep-G2 ENCSR692GFR.KMT2A.Hep-G2 130 bp overlap
MAX 3 datasets
ChIP HepG2 ENCFF507HCX 453 bp overlap
ChIP WA01 ENCSR000EUP.MAX.WA01 231 bp overlap
ChIP liver ENCFF584QGB 397 bp overlap
MYCN 2 datasets
ChIP LNCaP_DHT GSE117304.MYCN.LNCaP_DHT 187 bp overlap
ChIP LNCaP_EtOH GSE117304.MYCN.LNCaP_EtOH 210 bp overlap
NANOG 4 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 362 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 448 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 270 bp overlap
ChIP hESC GSE18292.NANOG.hESC 165 bp overlap
NCOR2 1 dataset
ChIP LS180_125 GSE39277.NCOR2.LS180_125 94 bp overlap
NELFCD 1 dataset
ChIP DLD-1_NELFCD-AID GSE144786.NELFCD.DLD-1_NELFCD-AID 192 bp overlap
NEUROD1 1 dataset
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 202 bp overlap
NFIA 1 dataset
ChIP HepG2 ENCFF815HWK 163 bp overlap
NFIL3 1 dataset
ChIP HepG2 ENCFF686VLI 337 bp overlap
NIPBL 3 datasets
ChIP GP5D GSE51234.NIPBL.GP5D 468 bp overlap
ChIP hESC_WNT3A GSE64758.NIPBL.hESC_WNT3A 291 bp overlap
ChIP hESC_WNT3A_ACTIVIN GSE64758.NIPBL.hESC_WNT3A_ACTIVIN 259 bp overlap
PAXIP1 3 datasets
ChIP Hep-G2 ENCSR530ARJ.PAXIP1.Hep-G2 209 bp overlap
ChIP HepG2 ENCFF526NOJ 445 bp overlap
ChIP HepG2 ENCFF526NOJ 390 bp overlap
PHF21A 1 dataset
ChIP HepG2 ENCFF525EUW 484 bp overlap
POLR2A 1 dataset
ChIP prostate gland ENCFF881OMH 228 bp overlap
POLR2G 2 datasets
ChIP HepG2 ENCFF241AEG 229 bp overlap
ChIP HepG2 ENCFF508UTS 229 bp overlap
POU2F3 1 dataset
ChIP NCI-H1048 GSE115123.POU2F3.NCI-H1048 364 bp overlap
POU5F1 1 dataset
ChIP HUES-8 GSE109524.POU5F1.HUES-8 308 bp overlap
PROX1 1 dataset
ChIP SW480 GSE60390.PROX1.SW480 338 bp overlap
RAD21 6 datasets
ChIP GP5D GSE51234.RAD21.GP5D 477 bp overlap
ChIP HAP1 GSE152721.RAD21.HAP1 231 bp overlap
ChIP HAP1 GSE126634.RAD21.HAP1 296 bp overlap
ChIP HAP1_CTCF GSE126634.RAD21.HAP1_CTCF 478 bp overlap
ChIP HAP1_clone25 GSE152721.RAD21.HAP1_clone25 219 bp overlap
ChIP liver ENCFF485PAC 438 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 223 bp overlap
RBM22 2 datasets
ChIP HepG2 ENCFF292RVQ 357 bp overlap
ChIP HepG2 ENCFF561IAJ 424 bp overlap
REST 1 dataset
ChIP liver ENCSR867WPH.REST.liver 175 bp overlap
RUNX1 1 dataset
ChIP VCaP_DHT24H GSE58428.RUNX1.VCaP_DHT24H 484 bp overlap
RXR 1 dataset
ChIP LS180 GSE31939.RXR.LS180 140 bp overlap
RXRA 1 dataset
ChIP liver ENCFF807CIA 451 bp overlap
SALL3 1 dataset
ChIP hiPSC GSE104863.SALL3.hiPSC 337 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 289 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 300 bp overlap
SMAD3 2 datasets
ChIP HCC1954 GSE104760.SMAD3.HCC1954 214 bp overlap
ChIP HCC1954_TGFb GSE104760.SMAD3.HCC1954_TGFb 283 bp overlap
SMARCA4 1 dataset
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 181 bp overlap
SMARCB1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 174 bp overlap
SMARCC1 1 dataset
ChIP DE_D1 S15-DE-d1-BAF155-exp1 320 bp overlap
SMC3 1 dataset
ChIP GP5D GSE51234.SMC3.GP5D 223 bp overlap
SNAI2 1 dataset
ChIP keratinocyte_LacZ GSE55421.SNAI2.keratinocyte_LacZ 335 bp overlap
SOX13 1 dataset
ChIP HepG2 ENCFF062VSQ 216 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 208 bp overlap
SOX2 4 datasets
ChIP LK2_DNp63 GSE137459.SOX2.LK2_DNp63 281 bp overlap
ChIP LK2_GFP GSE137459.SOX2.LK2_GFP 477 bp overlap
ChIP NCI-H520 GSE137459.SOX2.NCI-H520 313 bp overlap
ChIP hESC GSE18292.SOX2.hESC 95 bp overlap
SOX5 1 dataset
ChIP HepG2 ENCFF470KZD 139 bp overlap
SOX6 2 datasets
ChIP Hep-G2 ENCSR766TSU.SOX6.Hep-G2 266 bp overlap
ChIP HepG2 ENCFF767OCK 484 bp overlap
SP1 2 datasets
ChIP WTC11 ENCFF688PEU 476 bp overlap
ChIP liver ENCFF597LFJ 260 bp overlap
STAT3 2 datasets
ChIP HCC70 GSE152203.STAT3.HCC70 326 bp overlap
ChIP HCC70_EtOH GSE85579.STAT3.HCC70_EtOH 188 bp overlap
TBX2 1 dataset
ChIP HepG2 ENCFF811TLA 454 bp overlap
TCF3 1 dataset
ChIP NPC GSE154479.TCF3.NPC 309 bp overlap
TCF7 1 dataset
ChIP Hep-G2 ENCSR444LIN.TCF7.Hep-G2 221 bp overlap
TEAD3 1 dataset
ChIP HepG2 ENCFF054UUL 320 bp overlap
TFAP4 1 dataset
ChIP DLD-1 GSE46935.TFAP4.DLD-1 251 bp overlap
THRA 1 dataset
ChIP HepG2 ENCFF025KMX 377 bp overlap
XBP1 1 dataset
ChIP LNCaP_Tg GSE121880.XBP1.LNCaP_Tg 210 bp overlap
YY1 1 dataset
ChIP liver ENCFF400MBC 466 bp overlap
ZFP37 1 dataset
ChIP HEK293 ENCSR365GRX.ZFP37.HEK293 400 bp overlap
ZMYM4 1 dataset
ChIP HepG2 ENCFF567SQY 484 bp overlap
ZNF12 1 dataset
ChIP Hep-G2 ENCSR711KBM.ZNF12.Hep-G2 152 bp overlap
ZNF143 1 dataset
ChIP FLP143HA_T4 GSE39263.ZNF143.FLP143HA_T4 202 bp overlap
ZNF44 2 datasets
ChIP Hep-G2 ENCSR914HPP.ZNF44.Hep-G2 399 bp overlap
ChIP HepG2 ENCFF984YCN 459 bp overlap
ZNF462 2 datasets
ChIP GM23338 ENCFF896CCA 251 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 257 bp overlap
ZNF573 1 dataset
ChIP HEK293T GSE78099.ZNF573.HEK293T 185 bp overlap