chr18 : 48,542,873 48,543,072
199 bp 90 TFs 1 linked gene
This 199 bp open chromatin element is linked to CTIF and is bound by 90 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
CTIF 3.8 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr18:48,537,873 – 48,548,072
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
90 transcription factors
Source
Cell type
AR 3 datasets
ChIP breast_tumor_Female_8 GSE104399.AR.breast_tumor_Female_8 102 bp overlap
ChIP breast_tumor_Male_28 GSE104399.AR.breast_tumor_Male_28 177 bp overlap
ChIP prostate_DHT GSE61838.AR.prostate_DHT 152 bp overlap
ARID1A 1 dataset
ChIP MCF-7_4-hydroxytamoxifen GSE123284.ARID1A.MCF-7_4-hydroxytamoxifen 199 bp overlap
ASH2L 3 datasets
ChIP H1 ENCFF399KAM 199 bp overlap
ChIP Hep-G2 ENCSR508LMH.ASH2L.Hep-G2 124 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 199 bp overlap
ATF3 1 dataset
ChIP HCT-116_CAMP GSE74355.ATF3.HCT-116_CAMP 117 bp overlap
BCOR 1 dataset
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 116 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 108 bp overlap
BRD2 1 dataset
ChIP K-562_DMSO GSE138084.BRD2.K-562_DMSO 176 bp overlap
BRD3 1 dataset
ChIP HEK293T GSE39579.BRD3.HEK293T 145 bp overlap
BRD4 2 datasets
ChIP K-562_iBET-BD2-IFNG GSE138084.BRD4.K-562_iBET-BD2-IFNG 85 bp overlap
ChIP KOPT-K1_E GSE54379.BRD4.KOPT-K1_E 196 bp overlap
CBFA2T2 2 datasets
ChIP K-562 ENCSR699PVC.CBFA2T2.K-562 83 bp overlap
ChIP K562 ENCFF963TXY 187 bp overlap
CBFA2T3 2 datasets
ChIP K-562 ENCSR697YLJ.CBFA2T3.K-562 199 bp overlap
ChIP K562 ENCFF673OEZ 96 bp overlap
CDK8 1 dataset
ChIP HCT-116_NOMO GSE38258.CDK8.HCT-116_NOMO 187 bp overlap
CREBBP 1 dataset
ChIP keratinocyte GSE140991.CREBBP.keratinocyte 199 bp overlap
CTBP1 2 datasets
ChIP K-562 ENCSR201NQZ.CTBP1.K-562 199 bp overlap
ChIP MCF-7 ENCSR636EYA.CTBP1.MCF-7 169 bp overlap
CTBP2 1 dataset
ChIP MCF-7 GSE107013.CTBP2.MCF-7 143 bp overlap
CTCF 5 datasets
ChIP HFFc6 ENCFF005CJI 76 bp overlap
ChIP NCI-H929 ENCFF305JAB 127 bp overlap
ChIP NCI-H929 ENCSR634OAQ.CTCF.NCI-H929 51 bp overlap
ChIP chondrocyte ENCFF134ORZ 199 bp overlap
ChIP endodermal cell ENCFF471YCZ 99 bp overlap
E2F6 2 datasets
ChIP K-562 ENCSR000BLI.E2F6.K-562 92 bp overlap
ChIP K562 ENCFF136LTS 199 bp overlap
EGR1 2 datasets
ChIP K-562 ENCSR211LTF.EGR1.K-562 61 bp overlap
ChIP K562 ENCFF113OPQ 100 bp overlap
EGR2 1 dataset
ChIP HEK293 ENCFF336LFH 199 bp overlap
ESR1 17 datasets
ChIP MCF-7_E2 GSE14664.ESR1.MCF-7_E2 108 bp overlap
ChIP MCF-7_E2-10min-ERalpha GSE94023.ESR1.MCF-7_E2-10min-ERalpha 199 bp overlap
ChIP MCF-7_E2-5min-ERalpha GSE94023.ESR1.MCF-7_E2-5min-ERalpha 199 bp overlap
ChIP MCF-7_E2-ICI GSE67295.ESR1.MCF-7_E2-ICI 169 bp overlap
ChIP MCF-7_E2_45m GSE67295.ESR1.MCF-7_E2_45m 193 bp overlap
ChIP MCF-7_R5020 GSE68355.ESR1.MCF-7_R5020 156 bp overlap
ChIP MCF-7_RUNX2_DOX GSE86538.ESR1.MCF-7_RUNX2_DOX 199 bp overlap
ChIP MCF-7_SIGATA_E2 GSE40129.ESR1.MCF-7_SIGATA_E2 139 bp overlap
ChIP MCF-7_estradiol-DHT_4h GSE99626.ESR1.MCF-7_estradiol-DHT_4h 181 bp overlap
ChIP MCF-7_estradiol-Dex_4h GSE99626.ESR1.MCF-7_estradiol-Dex_4h 199 bp overlap
ChIP MCF-7_jc5850 GSE126004.ESR1.MCF-7_jc5850 199 bp overlap
ChIP MCF-7_jc5856 GSE126004.ESR1.MCF-7_jc5856 199 bp overlap
ChIP breast_tumor_BADOUTCOME GSE40867.ESR1.breast_tumor_BADOUTCOME 183 bp overlap
ChIP breast_tumor_Female_2 GSE104399.ESR1.breast_tumor_Female_2 199 bp overlap
ChIP breast_tumor_Female_6 GSE104399.ESR1.breast_tumor_Female_6 175 bp overlap
ChIP breast_tumor_Male_28 GSE104399.ESR1.breast_tumor_Male_28 155 bp overlap
ChIP primary-breast-cancer_B2_DSG GSE114737.ESR1.primary-breast-cancer_B2_DSG 199 bp overlap
ESRRA 3 datasets
ChIP MCF-7 ENCFF569SII 199 bp overlap
ChIP SK-BR-3_EGF GSE81651.ESRRA.SK-BR-3_EGF 196 bp overlap
ChIP SK-BR-3_HRG GSE81651.ESRRA.SK-BR-3_HRG 199 bp overlap
FOS 2 datasets
ChIP CFPAC-1 GSE119930.FOS.CFPAC-1 86 bp overlap
ChIP MCF-7 ENCSR569XNP.FOS.MCF-7 182 bp overlap
FOXJ3 1 dataset
ChIP HepG2 ENCFF430OSX 199 bp overlap
GATA6 3 datasets
ChIP DE_D1 S41-DE-d1-GATA6-exp2 146 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 179 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 157 bp overlap
GRHL1 1 dataset
ChIP MCF-7 GSE140185.GRHL1.MCF-7 137 bp overlap
GRHL2 6 datasets
ChIP HBE GSE46194.GRHL2.HBE 199 bp overlap
ChIP MCF-7 GSE109820.GRHL2.MCF-7 185 bp overlap
ChIP MCF-7-WS8_VEH GSE113092.GRHL2.MCF-7-WS8_VEH 199 bp overlap
ChIP MCF-7_E2_45min GSE109820.GRHL2.MCF-7_E2_45min 194 bp overlap
ChIP OVCA429 GSE71018.GRHL2.OVCA429 199 bp overlap
ChIP PEO1 GSE71018.GRHL2.PEO1 122 bp overlap
HDAC1 2 datasets
ChIP HepG2 ENCFF304IEJ 159 bp overlap
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.HDAC1.MCF-7_parental_4-hydroxytamoxifen 110 bp overlap
HDAC2 1 dataset
ChIP K-562 ENCSR893WSB.HDAC2.K-562 119 bp overlap
HOXA5 1 dataset
ChIP HepG2 ENCFF580MCT 199 bp overlap
ID3 1 dataset
ChIP K-562 ENCSR005NMT.ID3.K-562 141 bp overlap
IRF4 1 dataset
ChIP U266 GSE142493.IRF4.U266 142 bp overlap
JARID2 1 dataset
ChIP MRC-5_IPS25_MEG3 GSE48515.JARID2.MRC-5_IPS25_MEG3 134 bp overlap
JUN 5 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 62 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 64 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 130 bp overlap
ChIP ESC S24-ESC-d0-JUN-exp1 158 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 91 bp overlap
KLF3 1 dataset
ChIP keratinocyte GSE140991.KLF3.keratinocyte 199 bp overlap
KLF4 1 dataset
ChIP keratinocyte_diff GSE57702.KLF4.keratinocyte_diff 199 bp overlap
KMT2A 1 dataset
ChIP Hep-G2 ENCSR692GFR.KMT2A.Hep-G2 104 bp overlap
LDB1 1 dataset
ChIP K-562 GSE142227.LDB1.K-562 91 bp overlap
MAX 1 dataset
ChIP HepG2 ENCFF507HCX 73 bp overlap
MNT 1 dataset
ChIP K562 ENCFF820IGH 113 bp overlap
NCOR1 1 dataset
ChIP LS180_125 GSE39277.NCOR1.LS180_125 101 bp overlap
NELFCD 1 dataset
ChIP DLD-1_NELFCD-AID GSE144786.NELFCD.DLD-1_NELFCD-AID 199 bp overlap
NR3C1 2 datasets
ChIP MCF-7_E2_Dex GSE81510.NR3C1.MCF-7_E2_Dex 196 bp overlap
ChIP MCF-7_ICI_Dex GSE81510.NR3C1.MCF-7_ICI_Dex 141 bp overlap
NRIP1 1 dataset
ChIP MCF-7 ERP005838.NRIP1.MCF-7 129 bp overlap
PAF1 1 dataset
ChIP HCT-116_ab20662 GSE97527.PAF1.HCT-116_ab20662 182 bp overlap
PCGF1 1 dataset
ChIP WA01 GSE104690.PCGF1.WA01 199 bp overlap
PGR 2 datasets
ChIP MCF-7_PROG GSE68355.PGR.MCF-7_PROG 140 bp overlap
ChIP MCF-7_R5020 GSE68355.PGR.MCF-7_R5020 181 bp overlap
PHIP 1 dataset
ChIP HCT-116_ab834 GSE101646.PHIP.HCT-116_ab834 199 bp overlap
POLR2A 2 datasets
ChIP IMR-90 ENCFF672YWV 81 bp overlap
ChIP IMR-90 ENCFF672YWV 199 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 86 bp overlap
PROX1 1 dataset
ChIP SW480 GSE60390.PROX1.SW480 90 bp overlap
RAD21 1 dataset
ChIP HCT-116 GSE131606.RAD21.HCT-116 173 bp overlap
RBBP5 3 datasets
ChIP H1 ENCFF905HFL 199 bp overlap
ChIP H1 ENCFF905HFL 199 bp overlap
ChIP WA01 ENCSR000AQC.RBBP5.WA01 199 bp overlap
RBM39 2 datasets
ChIP K-562 ENCSR764OXF.RBM39.K-562 132 bp overlap
ChIP K-562 GSE120104.RBM39.K-562 118 bp overlap
RYBP 1 dataset
ChIP WA01 GSE104690.RYBP.WA01 199 bp overlap
SCRT2 1 dataset
ChIP HEK293 ENCFF711QQB 181 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 56 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 88 bp overlap
SMAD3 5 datasets
ChIP H69_4TGF GSE145250.SMAD3.H69_4TGF 186 bp overlap
ChIP HCC1954 GSE104760.SMAD3.HCC1954 199 bp overlap
ChIP HCC1954_TGFb GSE104760.SMAD3.HCC1954_TGFb 199 bp overlap
ChIP HMLE_Doxycicline_TGFb GSE104760.SMAD3.HMLE_Doxycicline_TGFb 73 bp overlap
ChIP NCI-H441_SIITTF1 GSE51509.SMAD3.NCI-H441_SIITTF1 199 bp overlap
SMARCA4 3 datasets
ChIP K-562 ENCSR587OQL.SMARCA4.K-562 121 bp overlap
ChIP MCF-7_parental GSE123284.SMARCA4.MCF-7_parental 145 bp overlap
ChIP endometrial-epithelial-cells_KO GSE106660.SMARCA4.endometrial-epithelial-cells_KO 199 bp overlap
SNAI2 1 dataset
ChIP PC-9_2DF GSE131687.SNAI2.PC-9_2DF 95 bp overlap
SP1 1 dataset
ChIP WA01 ENCSR000BIR.SP1.WA01 52 bp overlap
SP7 1 dataset
ChIP HEK293 ENCSR468IJT.SP7.HEK293 154 bp overlap
STAT3 3 datasets
ChIP BT-474 GSE152203.STAT3.BT-474 191 bp overlap
ChIP HCC1187 GSE152203.STAT3.HCC1187 192 bp overlap
ChIP HCC70 GSE152203.STAT3.HCC70 199 bp overlap
SUPT5H 2 datasets
ChIP DLD-1_NELFCD-AID GSE144786.SUPT5H.DLD-1_NELFCD-AID 199 bp overlap
ChIP DLD-1_NELFCD-AID_treated GSE144786.SUPT5H.DLD-1_NELFCD-AID_treated 137 bp overlap
TAL1 2 datasets
ChIP K-562_dCas9-LSD1 GSE132212.TAL1.K-562_dCas9-LSD1 141 bp overlap
ChIP K-562_enCRISPRi-KL GSE132212.TAL1.K-562_enCRISPRi-KL 151 bp overlap
TBP 1 dataset
ChIP K-562 GSE55306.TBP.K-562 177 bp overlap
TCF3 2 datasets
ChIP K-562 ENCSR970OJY.TCF3.K-562 151 bp overlap
ChIP Kasumi-1 GSE43834.TCF3.Kasumi-1 199 bp overlap
TFAP2C 2 datasets
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 199 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 199 bp overlap
TFAP4 1 dataset
ChIP DLD-1 GSE46935.TFAP4.DLD-1 199 bp overlap
UBTF 2 datasets
ChIP HepG2 ENCFF424RNN 199 bp overlap
ChIP HepG2 ENCFF424RNN 131 bp overlap
YY1AP1 1 dataset
ChIP PC-9_1DF GSE131687.YY1AP1.PC-9_1DF 157 bp overlap
ZBTB24 1 dataset
ChIP HCT-116 GSE111683.ZBTB24.HCT-116 178 bp overlap
ZEB2 2 datasets
ChIP K-562 ENCSR322CFO.ZEB2.K-562 171 bp overlap
ChIP K-562 ENCSR004GKA.ZEB2.K-562 113 bp overlap
ZFHX2 1 dataset
ChIP HEK293 ENCFF167TUA 152 bp overlap
ZFY 1 dataset
ChIP HepG2 ENCFF106ELT 199 bp overlap
ZNF264 1 dataset
ChIP HepG2 ENCFF453WJV 122 bp overlap
ZNF687 4 datasets
ChIP HepG2 ENCFF653WIX 199 bp overlap
ChIP HepG2 ENCFF653WIX 92 bp overlap
ChIP MCF-7 ENCFF440BFX 199 bp overlap
ChIP MCF-7 ENCSR899BKM.ZNF687.MCF-7 191 bp overlap
ZNF750 1 dataset
ChIP keratinocyte_diff GSE57702.ZNF750.keratinocyte_diff 154 bp overlap
ZNF777 1 dataset
ChIP HepG2 ENCFF362XDA 179 bp overlap
ZNF800 1 dataset
ChIP HepG2 ENCFF840FYM 199 bp overlap