chr17 : 61,456,171 61,456,729
558 bp 96 TFs 2 linked genes
This 558 bp open chromatin element is linked to TBX4 and ENSG00000267137 and is bound by 96 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
TBX4 3.8 kb Proximal Proximity
ENSG00000267137 6.7 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr17:61,451,171 – 61,461,729
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
96 transcription factors
Source
Cell type
AR 4 datasets
ChIP MDA-MB-453 ERP003503.AR.MDA-MB-453 175 bp overlap
ChIP prostate_cancer-associated-fibroblasts GSE90772.AR.prostate_cancer-associated-fibroblasts 287 bp overlap
ChIP prostate_cancer-associated-fibroblasts GSE90772.AR.prostate_cancer-associated-fibroblasts 117 bp overlap
ChIP prostate_fetal-fibroblast GSE90772.AR.prostate_fetal-fibroblast 321 bp overlap
ARID1B 1 dataset
ChIP MCF-7 GSE128445.ARID1B.MCF-7 415 bp overlap
ARNT 1 dataset
ChIP MCF-7_aza GSE85352.ARNT.MCF-7_aza 338 bp overlap
BCLAF1 2 datasets
ChIP K-562 ENCSR492LTS.BCLAF1.K-562 320 bp overlap
ChIP K-562 ENCSR792IYC.BCLAF1.K-562 257 bp overlap
BCOR 1 dataset
ChIP WA01_KDM2B_KO GSE104690.BCOR.WA01_KDM2B_KO 558 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 194 bp overlap
BRD4 8 datasets
ChIP HFOB_DIFF GSE82295.BRD4.HFOB_DIFF 558 bp overlap
ChIP MCF-10A ERP003925.BRD4.MCF-10A 117 bp overlap
ChIP MCF-10A ERP003925.BRD4.MCF-10A 375 bp overlap
ChIP MCF-7_E2 GSE55921.BRD4.MCF-7_E2 273 bp overlap
ChIP MDA-MB-157 ERP003925.BRD4.MDA-MB-157 184 bp overlap
ChIP MDA-MB-157 ERP003925.BRD4.MDA-MB-157 236 bp overlap
ChIP T-47D ERP003925.BRD4.T-47D 257 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 395 bp overlap
CBX4 1 dataset
ChIP hMSC GSE117084.CBX4.hMSC 151 bp overlap
CDK9 1 dataset
ChIP HCT-116 GSE72622.CDK9.HCT-116 171 bp overlap
CHD1 1 dataset
ChIP hMSC-TERT GSE89179.CHD1.hMSC-TERT 85 bp overlap
CREBBP 1 dataset
ChIP NCI-H3396 GSE32349.CREBBP.NCI-H3396 108 bp overlap
CRY1 1 dataset
ChIP U2OS GSE44236.CRY1.U2OS 204 bp overlap
CTBP2 1 dataset
ChIP WA01 ENCSR000EUO.CTBP2.WA01 511 bp overlap
CTCF 7 datasets
ChIP MCF-7L_TAMR GSE108787.CTCF.MCF-7L_TAMR 246 bp overlap
ChIP T-47D_NaCl-isotonic-triptolide GSE111923.CTCF.T-47D_NaCl-isotonic-triptolide 325 bp overlap
ChIP T-47D_NaCl-triptolide GSE111923.CTCF.T-47D_NaCl-triptolide 440 bp overlap
ChIP colon_sigmoid ENCSR721AHD.CTCF.colon_sigmoid 108 bp overlap
ChIP spleen ENCFF065CBS 324 bp overlap
ChIP spleen ENCFF065CBS 358 bp overlap
ChIP spleen ENCFF065CBS 135 bp overlap
CTCFL 1 dataset
ChIP K-562 GSE70764.CTCFL.K-562 146 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF460KDD 152 bp overlap
DDX5 1 dataset
ChIP NTERA2 GSE58641.DDX5.NTERA2 266 bp overlap
E2F4 1 dataset
ChIP WTC11 ENCFF574OKJ 75 bp overlap
E2F6 5 datasets
ChIP H1 ENCFF785DWK 227 bp overlap
ChIP K-562 ENCSR000EWJ.E2F6.K-562 148 bp overlap
ChIP K-562 ENCSR000BLI.E2F6.K-562 111 bp overlap
ChIP K562 ENCFF136LTS 325 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 296 bp overlap
EP300 2 datasets
ChIP MCF-7_shCtrl GSE128445.EP300.MCF-7_shCtrl 402 bp overlap
ChIP MCF-7_shJUN GSE128445.EP300.MCF-7_shJUN 558 bp overlap
ERG 2 datasets
ChIP CD34_NR29 GSE23730.ERG.CD34_NR29 265 bp overlap
ChIP MCF-7 GSE23730.ERG.MCF-7 234 bp overlap
ESR1 17 datasets
ChIP Ishikawa_DMSO_D538G_clone3 GSE132426.ESR1.Ishikawa_DMSO_D538G_clone3 105 bp overlap
ChIP MCF-7 GSE68355.ESR1.MCF-7 225 bp overlap
ChIP MCF-7 GSE148277.ESR1.MCF-7 475 bp overlap
ChIP MCF-7 GSE48930.ESR1.MCF-7 183 bp overlap
ChIP MCF-7_D538G GSE148277.ESR1.MCF-7_D538G 344 bp overlap
ChIP MCF-7_E2 GSE71276.ESR1.MCF-7_E2 202 bp overlap
ChIP MCF-7_GLYC ERP002305.ESR1.MCF-7_GLYC 222 bp overlap
ChIP MCF-7_PROG GSE68355.ESR1.MCF-7_PROG 311 bp overlap
ChIP MCF-7_Veh GSE67295.ESR1.MCF-7_Veh 83 bp overlap
ChIP MCF-7_Y537S_DMSO GSE148277.ESR1.MCF-7_Y537S_DMSO 558 bp overlap
ChIP MCF-7_aldosterone GSE99626.ESR1.MCF-7_aldosterone 558 bp overlap
ChIP MCF-7_estradiol-aldosterone_45min GSE99626.ESR1.MCF-7_estradiol-aldosterone_45min 387 bp overlap
ChIP MCF-7_estradiol_45min_ChIP-and-reChIP GSE99626.ESR1.MCF-7_estradiol_45min_ChIP-and-reChIP 558 bp overlap
ChIP MCF-7_shCtrl_TamR GSE128445.ESR1.MCF-7_shCtrl_TamR 220 bp overlap
ChIP MCF-7_vehicle GSE102410.ESR1.MCF-7_vehicle 186 bp overlap
ChIP MCF-7_vehicle_45min_H2 GSE99626.ESR1.MCF-7_vehicle_45min_H2 71 bp overlap
ChIP NCI-H3396_ETOH GSE32349.ESR1.NCI-H3396_ETOH 253 bp overlap
ESRRA 1 dataset
ChIP MCF-7 ENCSR954WVZ.ESRRA.MCF-7 176 bp overlap
EWSR1 1 dataset
ChIP K-562 ENCSR142YYA.EWSR1.K-562 307 bp overlap
EZH2 13 datasets
ChIP GM23338 ENCFF613YON 558 bp overlap
ChIP H1 ENCFF232NZA 558 bp overlap
ChIP astrocyte ENCFF365JTP 558 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 558 bp overlap
ChIP hESC GSE113817.EZH2.hESC 313 bp overlap
ChIP hESC_KO GSE113817.EZH2.hESC_KO 165 bp overlap
ChIP hiPSC_WTa_RNase-neg GSE128135.EZH2.hiPSC_WTa_RNase-neg 250 bp overlap
ChIP mammary epithelial cell ENCFF224GAI 174 bp overlap
ChIP myotube ENCSR000ASZ.EZH2.myotube 293 bp overlap
ChIP neural progenitor cell ENCFF018MKA 558 bp overlap
ChIP neural progenitor cell ENCFF018MKA 558 bp overlap
ChIP neural progenitor cell ENCFF472NFV 558 bp overlap
ChIP peripheral-blood-mononuclear-cell_B-cell GSE115772.EZH2.peripheral-blood-mononuclear-cell_B-cell 259 bp overlap
FOXA1 1 dataset
ChIP breast-cancer_heregulin-Herceptin-ICI GSE101407.FOXA1.breast-cancer_heregulin-Herceptin-ICI 228 bp overlap
FOXA2 1 dataset
ChIP BJ1-hTERT_FoxHnf1aCoExp GSE90454.FOXA2.BJ1-hTERT_FoxHnf1aCoExp 352 bp overlap
GATA2 1 dataset
ChIP ME-1_CBFB-MYH11-KD GSE117138.GATA2.ME-1_CBFB-MYH11-KD 359 bp overlap
GATA3 2 datasets
ChIP MCF-7 GSE128445.GATA3.MCF-7 395 bp overlap
ChIP MCF-7_TamR GSE128445.GATA3.MCF-7_TamR 297 bp overlap
GATA6 1 dataset
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 104 bp overlap
HEXIM1 1 dataset
ChIP HCT-116 GSE72622.HEXIM1.HCT-116 381 bp overlap
HNRNPL 1 dataset
ChIP Hep-G2 GSE120104.HNRNPL.Hep-G2 265 bp overlap
HOXA3 1 dataset
ChIP Hep-G2 ENCSR999JKC.HOXA3.Hep-G2 162 bp overlap
HSF1 1 dataset
ChIP MCF-7 ENCSR062HDL.HSF1.MCF-7 305 bp overlap
JUN 4 datasets
ChIP HUES-8 GSE109524.JUN.HUES-8 279 bp overlap
ChIP MCF-7 GSE128445.JUN.MCF-7 319 bp overlap
ChIP MCF-7_BD610326 GSE128445.JUN.MCF-7_BD610326 490 bp overlap
ChIP MCF-7_TamR GSE128445.JUN.MCF-7_TamR 324 bp overlap
KDM4A 1 dataset
ChIP WA01 ENCSR000AVC.KDM4A.WA01 261 bp overlap
KDM5B 2 datasets
ChIP MCF-7 GSE46055.KDM5B.MCF-7 558 bp overlap
ChIP SUM185_SHCTCF GSE46055.KDM5B.SUM185_SHCTCF 176 bp overlap
MAX 3 datasets
ChIP H1 ENCFF914VQY 205 bp overlap
ChIP K562 ENCFF524IJO 397 bp overlap
ChIP endothelial_umbilical-vein ENCSR000EEZ.MAX.endothelial_umbilical-vein 103 bp overlap
MBD2 2 datasets
ChIP HeLa GSE41006.MBD2.HeLa 95 bp overlap
ChIP MCF-7 ENCSR940MHE.MBD2.MCF-7 171 bp overlap
MBD3 1 dataset
ChIP MCF-7 GSE44737.MBD3.MCF-7 140 bp overlap
MYC 1 dataset
ChIP P493-6_4HR GSE125863.MYC.P493-6_4HR 183 bp overlap
MYOCD 1 dataset
ChIP A-549 GSE128921.MYOCD.A-549 238 bp overlap
NANOG 1 dataset
ChIP HUES-8 GSE109524.NANOG.HUES-8 540 bp overlap
NCOR1 1 dataset
ChIP LS180_125 GSE39277.NCOR1.LS180_125 101 bp overlap
NFATC3 1 dataset
ChIP Hep-G2 GSE97661.NFATC3.Hep-G2 197 bp overlap
NFIB 1 dataset
ChIP MCF-7 ENCSR582ZOA.NFIB.MCF-7 211 bp overlap
NFRKB 1 dataset
ChIP K-562 ENCSR996ESX.NFRKB.K-562 245 bp overlap
NR2F2 1 dataset
ChIP MCF-7_E2 GSE132432.NR2F2.MCF-7_E2 527 bp overlap
PCBP1 2 datasets
ChIP Hep-G2 GSE120104.PCBP1.Hep-G2 76 bp overlap
ChIP Hep-G2 GSE120104.PCBP1.Hep-G2 216 bp overlap
PGR 1 dataset
ChIP MCF-7_R5020 GSE68355.PGR.MCF-7_R5020 292 bp overlap
POLR2A 1 dataset
ChIP upper lobe of left lung ENCFF095BJW 293 bp overlap
POU2F1 1 dataset
ChIP T-47D_D538G GSE148277.POU2F1.T-47D_D538G 259 bp overlap
POU5F1 3 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 558 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 423 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 505 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 558 bp overlap
RB1 2 datasets
ChIP GM12878 ENCSR916BOH.RB1.GM12878 120 bp overlap
ChIP GM12878 ENCSR785OKZ.RB1.GM12878 289 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 244 bp overlap
RBM14 1 dataset
ChIP K-562 ENCSR423FCW.RBM14.K-562 193 bp overlap
RELA 1 dataset
ChIP HEK293_TNF-1h GSE75562.RELA.HEK293_TNF-1h 331 bp overlap
RFX1 1 dataset
ChIP MCF-7 ENCSR066TET.RFX1.MCF-7 184 bp overlap
RFX5 1 dataset
ChIP MCF-7 ENCSR924TVL.RFX5.MCF-7 233 bp overlap
RNF2 2 datasets
ChIP H1 ENCFF239FFS 558 bp overlap
ChIP HUES-64 GSE104059.RNF2.HUES-64 207 bp overlap
RORC 2 datasets
ChIP HCC70 GSE126380.RORC.HCC70 454 bp overlap
ChIP HCC70_XY018 GSE126380.RORC.HCC70_XY018 356 bp overlap
RUNX1 2 datasets
ChIP Jurkat GSE85524.RUNX1.Jurkat 199 bp overlap
ChIP ME-1 GSE46044.RUNX1.ME-1 225 bp overlap
SIN3A 1 dataset
ChIP MCF-7 ENCSR468LUO.SIN3A.MCF-7 250 bp overlap
SMARCA4 2 datasets
ChIP MCF-7 GSE128445.SMARCA4.MCF-7 416 bp overlap
ChIP MCF-7_shJUN GSE128445.SMARCA4.MCF-7_shJUN 345 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 162 bp overlap
SREBP2 2 datasets
ChIP HCC70 GSE126380.SREBP2.HCC70 558 bp overlap
ChIP HCC70_XY018 GSE126380.SREBP2.HCC70_XY018 386 bp overlap
SS18-SSX 1 dataset
ChIP fibroblast_78aa-SSX-Tail GSE139053.SS18-SSX.fibroblast_78aa-SSX-Tail 312 bp overlap
SUZ12 7 datasets
ChIP CRL-7250_shSS18-SSX GSE108025.SUZ12.CRL-7250_shSS18-SSX 219 bp overlap
ChIP GM12878 ENCSR091BOQ.SUZ12.GM12878 203 bp overlap
ChIP GM12878 ENCSR744XTG.SUZ12.GM12878 56 bp overlap
ChIP H1 ENCFF507HGF 271 bp overlap
ChIP H1 ENCFF507HGF 234 bp overlap
ChIP H1 ENCFF881NFR 558 bp overlap
ChIP NT2/D1 ENCFF574SXS 175 bp overlap
TAF15 2 datasets
ChIP Hep-G2 GSE120104.TAF15.Hep-G2 267 bp overlap
ChIP Hep-G2 ENCSR825MZS.TAF15.Hep-G2 207 bp overlap
TCF7 1 dataset
ChIP breast-organoid_BRCA2-mut GSE113909.TCF7.breast-organoid_BRCA2-mut 294 bp overlap
TEAD4 1 dataset
ChIP A549 ENCFF243FTL 277 bp overlap
TP53 1 dataset
ChIP SaOS-2 ERP002038.TP53.SaOS-2 114 bp overlap
TP63 1 dataset
ChIP keratinocyte_diff GSE33571.TP63.keratinocyte_diff 143 bp overlap
TRIM25 1 dataset
ChIP BT-549 GSE79588.TRIM25.BT-549 437 bp overlap
USF1 4 datasets
ChIP H1 ENCFF090WVU 241 bp overlap
ChIP WA01 ENCSR000BIU.USF1.WA01 123 bp overlap
ChIP WTC11 ENCFF699QGS 414 bp overlap
ChIP WTC11 ENCFF699QGS 215 bp overlap
USF2 2 datasets
ChIP K-562 GSE111469.USF2.K-562 281 bp overlap
ChIP WTC11 ENCFF139JAW 382 bp overlap
ZBED5 1 dataset
ChIP HepG2 ENCFF991QZL 317 bp overlap
ZBTB1 1 dataset
ChIP MCF-7 ENCSR309ELI.ZBTB1.MCF-7 160 bp overlap
ZBTB11 2 datasets
ChIP K562 ENCFF694AXU 94 bp overlap
ChIP K562 ENCFF694AXU 131 bp overlap
ZBTB33 1 dataset
ChIP HepG2 ENCFF778UKV 337 bp overlap
ZNF548 1 dataset
ChIP HepG2 ENCFF586TZH 151 bp overlap
ZNF724 1 dataset
ChIP HepG2 ENCFF318TJD 57 bp overlap