chr17 : 58,325,271 – 58,325,527
256 bp 103 TFs 3 linked genes
This 256 bp open chromatin element is linked to TSPOAP1-AS1, TSPOAP1, and MIR142 and is bound by 103 transcription factors.
Linked Genes
3 genes
Distance
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
TSPOAP1-AS1 800 bp At TSS Proximity
TSPOAP1 3.3 kb Proximal Proximity
MIR142 5.8 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr17:58,320,271 – 58,330,527
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
103 transcription factors
Source
Cell type
AGO1 2 datasets
ChIP K562 ENCFF025NLP 130 bp overlap
ChIP K562 ENCFF741BCI 129 bp overlap
ASCL1 1 dataset
ChIP SCLC_ASCLP GSE61197.ASCL1.SCLC_ASCLP 124 bp overlap
ASH2L 1 dataset
ChIP VCaP_R1881 GSE60841.ASH2L.VCaP_R1881 136 bp overlap
BCL11A 1 dataset
ChIP GM12878 ENCSR000BHA.BCL11A.GM12878 150 bp overlap
BCOR 1 dataset
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 78 bp overlap
BMI1 1 dataset
ChIP GM12878 ENCSR469WII.BMI1.GM12878 256 bp overlap
BRD4 9 datasets
ChIP CLL_patient2 GSE109411.BRD4.CLL_patient2 256 bp overlap
ChIP CLL_patient3 GSE109411.BRD4.CLL_patient3 237 bp overlap
ChIP CLL_patient3_4h_CpG GSE109411.BRD4.CLL_patient3_4h_CpG 176 bp overlap
ChIP CLL_patient4 GSE109411.BRD4.CLL_patient4 101 bp overlap
ChIP HT29 GSE73319.BRD4.HT29 256 bp overlap
ChIP THP-1_iBET-BD2 GSE138084.BRD4.THP-1_iBET-BD2 256 bp overlap
ChIP retina_AB1-FW20 GSE86981.BRD4.retina_AB1-FW20 202 bp overlap
ChIP retina_AB1-FW23 GSE86981.BRD4.retina_AB1-FW23 110 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 256 bp overlap
CDK9 1 dataset
ChIP BT-474_INHHDAC ERP010664.CDK9.BT-474_INHHDAC 235 bp overlap
CHD1 2 datasets
ChIP MCF-7 ENCFF937PTG 168 bp overlap
ChIP hMSC-TERT GSE89179.CHD1.hMSC-TERT 65 bp overlap
COMMD3-BMI1,BMI1 2 datasets
ChIP GM12878 ENCFF249AMT 256 bp overlap
ChIP GM12878 ENCFF249AMT 172 bp overlap
CTCF 4 datasets
ChIP Hep-G2 ENCSR000DUG.CTCF.Hep-G2 79 bp overlap
ChIP HepG2 ENCFF127KUP 85 bp overlap
ChIP MM1-S GSE43743.CTCF.MM1-S 78 bp overlap
ChIP WERI-Rb-1 ENCFF349QKF 71 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF274GAT 66 bp overlap
E2F6 2 datasets
ChIP H1 ENCFF785DWK 116 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 256 bp overlap
EP300 1 dataset
ChIP osteoblast ENCSR000AUD.EP300.osteoblast 137 bp overlap
ESR1 1 dataset
ChIP breast_tumor_Male_21 GSE104399.ESR1.breast_tumor_Male_21 256 bp overlap
ETV6 2 datasets
ChIP WTC11 ENCFF812SCD 213 bp overlap
ChIP WTC11 ENCFF812SCD 256 bp overlap
EZH2 10 datasets
ChIP GM23248 ENCSR131FFJ.EZH2.GM23248 102 bp overlap
ChIP HUVEC-C GSE109625.EZH2.HUVEC-C 203 bp overlap
ChIP SU-DHL-6_DMSO GSE134136.EZH2.SU-DHL-6_DMSO 256 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 215 bp overlap
ChIP endothelial_umbilical-vein ENCSR000ATA.EZH2.endothelial_umbilical-vein 213 bp overlap
ChIP epithelial_mammary ENCSR000ARE.EZH2.epithelial_mammary 91 bp overlap
ChIP fibroblast of lung ENCFF479BAW 203 bp overlap
ChIP fibroblast_LUNG ENCSR000ARO.EZH2.fibroblast_LUNG 55 bp overlap
ChIP keratinocyte ENCFF070STK 136 bp overlap
ChIP mammary epithelial cell ENCFF224GAI 132 bp overlap
EZH2_phosphoT487 1 dataset
ChIP neuron_bipolar_doxy_4d ENCSR886KKK.EZH2_phosphoT487.neuron_bipolar_doxy_4d 101 bp overlap
FOXK1 1 dataset
ChIP WTC11 ENCFF875IGU 173 bp overlap
GABPB1 2 datasets
ChIP K562 ENCFF885NMS 251 bp overlap
ChIP K562 ENCFF885NMS 256 bp overlap
GATAD2B 1 dataset
ChIP GM12878 ENCSR828NCB.GATAD2B.GM12878 236 bp overlap
GLIS2 1 dataset
ChIP HCT-116_5FU GSE125927.GLIS2.HCT-116_5FU 131 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 65 bp overlap
GTF2F1 1 dataset
ChIP MCF-7 ENCSR557JTZ.GTF2F1.MCF-7 256 bp overlap
HAND2 2 datasets
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 256 bp overlap
ChIP Kelly GSE94822.HAND2.Kelly 131 bp overlap
HDAC6 1 dataset
ChIP GM12878 ENCSR933EYC.HDAC6.GM12878 162 bp overlap
INO80 1 dataset
ChIP Huh-7 GSE97411.INO80.Huh-7 129 bp overlap
INTS11 1 dataset
ChIP HL-60 GSE106359.INTS11.HL-60 256 bp overlap
INTS13 1 dataset
ChIP HL-60 GSE106359.INTS13.HL-60 256 bp overlap
JARID2 1 dataset
ChIP UTEIPS6 GSE48516.JARID2.UTEIPS6 80 bp overlap
KAT2B 1 dataset
ChIP A-549 ENCSR356WVQ.KAT2B.A-549 127 bp overlap
KDM1A 4 datasets
ChIP NCI-H526_DMSO GSE66297.KDM1A.NCI-H526_DMSO 85 bp overlap
ChIP NCI-H526_DMSO GSE66297.KDM1A.NCI-H526_DMSO 119 bp overlap
ChIP SKNO-1_GSK690 GSE71739.KDM1A.SKNO-1_GSK690 155 bp overlap
ChIP SKNO-1_RN1 GSE71739.KDM1A.SKNO-1_RN1 100 bp overlap
KLF5 1 dataset
ChIP GM12878 ENCSR974OFJ.KLF5.GM12878 256 bp overlap
KMT2A 1 dataset
ChIP RCH-ACV GSE83671.KMT2A.RCH-ACV 200 bp overlap
MAX 8 datasets
ChIP Hep-G2 ENCSR168DYA.MAX.Hep-G2 79 bp overlap
ChIP K562 ENCFF398VJM 116 bp overlap
ChIP K562 ENCFF398VJM 256 bp overlap
ChIP NCI-H2171 GSE41105.MAX.NCI-H2171 256 bp overlap
ChIP NCI-H2171 GSE36354.MAX.NCI-H2171 256 bp overlap
ChIP WA01 ENCSR000EUP.MAX.WA01 233 bp overlap
ChIP WTC11 ENCFF223QFY 61 bp overlap
ChIP WTC11 ENCFF223QFY 256 bp overlap
MED26 2 datasets
ChIP HCT-116 GSE121355.MED26.HCT-116 111 bp overlap
ChIP HCT-116_aux GSE121355.MED26.HCT-116_aux 107 bp overlap
MLLT1 1 dataset
ChIP GM12878 ENCSR552XSN.MLLT1.GM12878 166 bp overlap
MNT 1 dataset
ChIP HepG2 ENCFF701PYP 87 bp overlap
MORC2 1 dataset
ChIP H9 GSE95374.MORC2.H9 54 bp overlap
MXI1 5 datasets
ChIP H1 ENCFF963FZS 256 bp overlap
ChIP SK-N-SH ENCFF746HVJ 145 bp overlap
ChIP WA01 ENCSR000EBR.MXI1.WA01 234 bp overlap
ChIP neural ENCSR934NHU.MXI1.neural 134 bp overlap
ChIP neural cell ENCFF623HQN 84 bp overlap
MYC 5 datasets
ChIP H1 ENCFF794ZJT 166 bp overlap
ChIP NB69 GSE138295.MYC.NB69 256 bp overlap
ChIP NCI-H128 GSE41105.MYC.NCI-H128 91 bp overlap
ChIP NCI-H2171 GSE36354.MYC.NCI-H2171 256 bp overlap
ChIP P493-6_Dpy30-shRNA GSE101853.MYC.P493-6_Dpy30-shRNA 171 bp overlap
MYCN 2 datasets
ChIP CHP-134 GSE129588.MYCN.CHP-134 169 bp overlap
ChIP LA-N-5 GSE138295.MYCN.LA-N-5 256 bp overlap
MYOD1 1 dataset
ChIP IMR-90_GM GSE128527.MYOD1.IMR-90_GM 145 bp overlap
NFIB 1 dataset
ChIP MCF-7 ENCSR702BYX.NFIB.MCF-7 117 bp overlap
NOTCH1 1 dataset
ChIP HPBALL GSE39263.NOTCH1.HPBALL 217 bp overlap
NR3C1 1 dataset
ChIP breast_tumor_Male_21 GSE104399.NR3C1.breast_tumor_Male_21 110 bp overlap
OGG1 2 datasets
ChIP HEK293 GSE89017.OGG1.HEK293 51 bp overlap
ChIP HEK293_60_min GSE89017.OGG1.HEK293_60_min 72 bp overlap
PARP1 1 dataset
ChIP MCF-10A GSE93038.PARP1.MCF-10A 160 bp overlap
PAX5 2 datasets
ChIP GM12878 ENCSR000BHJ.PAX5.GM12878 227 bp overlap
ChIP GM12878 ENCSR000BHD.PAX5.GM12878 170 bp overlap
PBX3 1 dataset
ChIP GM12878 ENCSR000BGR.PBX3.GM12878 224 bp overlap
PDX1 2 datasets
ChIP hiPSC GSE125768.PDX1.hiPSC 231 bp overlap
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 181 bp overlap
POLR2A 12 datasets
ChIP GM12878 ENCFF412KAE 256 bp overlap
ChIP GM12891 ENCFF012SUT 127 bp overlap
ChIP H1 ENCFF566JSR 256 bp overlap
ChIP HCT116 ENCFF849NGT 120 bp overlap
ChIP K562 ENCFF215CWW 256 bp overlap
ChIP K562 ENCFF262YXJ 256 bp overlap
ChIP K562 ENCFF643HGX 256 bp overlap
ChIP K562 ENCFF643HGX 219 bp overlap
ChIP erythroblast ENCFF498VMR 256 bp overlap
ChIP erythroblast ENCFF498VMR 256 bp overlap
ChIP erythroblast ENCFF498VMR 66 bp overlap
ChIP spleen ENCFF706IUS 137 bp overlap
POLR2G 2 datasets
ChIP K562 ENCFF047BLG 139 bp overlap
ChIP K562 ENCFF648YPL 165 bp overlap
POU2F1 2 datasets
ChIP 22Rv1_Veh GSE123565.POU2F1.22Rv1_Veh 208 bp overlap
ChIP T-47D_D538G GSE148277.POU2F1.T-47D_D538G 175 bp overlap
POU2F3 1 dataset
ChIP NCI-H1048 GSE115123.POU2F3.NCI-H1048 224 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 128 bp overlap
PTBP1 1 dataset
ChIP K562 ENCFF238NLS 95 bp overlap
RAD21 1 dataset
ChIP HepG2 ENCFF360ZSW 54 bp overlap
RBFOX2 4 datasets
ChIP K-562 ENCSR822LBD.RBFOX2.K-562 256 bp overlap
ChIP K-562 GSE120104.RBFOX2.K-562 256 bp overlap
ChIP K562 ENCFF196WTG 62 bp overlap
ChIP K562 ENCFF967GRF 62 bp overlap
RBM22 5 datasets
ChIP K-562 GSE120104.RBM22.K-562 74 bp overlap
ChIP K-562 GSE120104.RBM22.K-562 95 bp overlap
ChIP K-562 ENCSR848AOP.RBM22.K-562 70 bp overlap
ChIP K562 ENCFF420JDS 236 bp overlap
ChIP K562 ENCFF629OUL 212 bp overlap
REL 1 dataset
ChIP Ramos GSE139810.REL.Ramos 256 bp overlap
RFX1 8 datasets
ChIP K-562 ENCSR968GIB.RFX1.K-562 256 bp overlap
ChIP K-562 ENCSR041AXL.RFX1.K-562 256 bp overlap
ChIP K562 ENCFF421AVO 256 bp overlap
ChIP K562 ENCFF809XVG 256 bp overlap
ChIP MCF-7 ENCFF782EZS 256 bp overlap
ChIP MCF-7 ENCFF973QAD 108 bp overlap
ChIP MCF-7 ENCSR066TET.RFX1.MCF-7 256 bp overlap
ChIP MCF-7 ENCSR788XNX.RFX1.MCF-7 256 bp overlap
RUNX1 1 dataset
ChIP epididymis_HEE GSE109061.RUNX1.epididymis_HEE 184 bp overlap
RYBP 1 dataset
ChIP WA01 GSE104690.RYBP.WA01 256 bp overlap
SALL3 1 dataset
ChIP hiPSC GSE104863.SALL3.hiPSC 207 bp overlap
SIN3A 2 datasets
ChIP MCF-7 ENCSR468LUO.SIN3A.MCF-7 126 bp overlap
ChIP WA01 ENCSR000EBO.SIN3A.WA01 256 bp overlap
SKI 1 dataset
ChIP HL-60_CRISPRCas9_ctrl GSE107553.SKI.HL-60_CRISPRCas9_ctrl 253 bp overlap
SMAD1 1 dataset
ChIP Hep-G2 ENCSR213QOZ.SMAD1.Hep-G2 162 bp overlap
SMAD3 1 dataset
ChIP BG03 GSE21614.SMAD3.BG03 142 bp overlap
SMAD5 1 dataset
ChIP K-562 ENCSR000FCD.SMAD5.K-562 190 bp overlap
SMARCA4 1 dataset
ChIP NGP_ARID1A-het GSE134626.SMARCA4.NGP_ARID1A-het 256 bp overlap
SMC1 1 dataset
ChIP DKO GSE131606.SMC1.DKO 79 bp overlap
SMC3 1 dataset
ChIP neural ENCSR404BPV.SMC3.neural 158 bp overlap
SP1 1 dataset
ChIP H1 ENCFF263FUH 217 bp overlap
SPI1 1 dataset
ChIP OCI-Ly3 GSE56857.SPI1.OCI-Ly3 151 bp overlap
STAG1 1 dataset
ChIP HepG2 ENCFF843EBZ 130 bp overlap
SUZ12 1 dataset
ChIP CRL-7250_shSS18 GSE108025.SUZ12.CRL-7250_shSS18 159 bp overlap
TAF1 1 dataset
ChIP WA01 ENCSR000BHO.TAF1.WA01 177 bp overlap
TBP 3 datasets
ChIP K-562 GSE55306.TBP.K-562 88 bp overlap
ChIP WA01 ENCSR000ECB.TBP.WA01 151 bp overlap
ChIP hESC GSE122298.TBP.hESC 143 bp overlap
TCF12 1 dataset
ChIP WA01 ENCSR000BIT.TCF12.WA01 150 bp overlap
TCF3 2 datasets
ChIP GM12878 ENCSR000BQT.TCF3.GM12878 223 bp overlap
ChIP RCH-ACV GSE85988.TCF3.RCH-ACV 256 bp overlap
TEAD1 1 dataset
ChIP WTC11 ENCFF502QUV 221 bp overlap
TFDP1 1 dataset
ChIP K562 ENCFF584VSB 194 bp overlap
TRIM22 1 dataset
ChIP GM12878 ENCSR637QAM.TRIM22.GM12878 256 bp overlap
TRIM28 1 dataset
ChIP hESC GSE115387.TRIM28.hESC 56 bp overlap
USF1 1 dataset
ChIP WA01 ENCSR000BIU.USF1.WA01 114 bp overlap
XRCC5 1 dataset
ChIP K-562 GSE120104.XRCC5.K-562 252 bp overlap
ZBED1 1 dataset
ChIP GM12878 ENCFF007OSW 151 bp overlap
ZBTB33 2 datasets
ChIP K-562 ENCSR876GXA.ZBTB33.K-562 82 bp overlap
ChIP K562 ENCFF427SDV 133 bp overlap
ZBTB48 1 dataset
ChIP U2OS_ZBTB48-KO GSE96776.ZBTB48.U2OS_ZBTB48-KO 256 bp overlap
ZBTB7B 1 dataset
ChIP HepG2 ENCFF763OCV 125 bp overlap
ZFP91 1 dataset
ChIP HepG2 ENCFF012CME 256 bp overlap
ZFX 2 datasets
ChIP HEK293T_FLAG GSE145160.ZFX.HEK293T_FLAG 256 bp overlap
ChIP HepG2 ENCFF016NZF 236 bp overlap
ZKSCAN1 3 datasets
ChIP MCF-7 ENCFF247MBY 91 bp overlap
ChIP MCF-7 ENCFF247MBY 256 bp overlap
ChIP MCF-7 ENCSR449UFF.ZKSCAN1.MCF-7 156 bp overlap
ZNF143 4 datasets
ChIP FLP143HA_T4 GSE39263.ZNF143.FLP143HA_T4 193 bp overlap
ChIP MCF-7 GSE76454.ZNF143.MCF-7 256 bp overlap
ChIP MCF-7_E2 GSE76454.ZNF143.MCF-7_E2 256 bp overlap
ChIP WA01 ENCSR000EBW.ZNF143.WA01 124 bp overlap
ZNF189 1 dataset
ChIP HEK293 ENCSR163RYW.ZNF189.HEK293 80 bp overlap
ZNF257 1 dataset
ChIP HEK293T GSE78099.ZNF257.HEK293T 127 bp overlap
ZNF276 1 dataset
ChIP Hep-G2 ENCSR076KLJ.ZNF276.Hep-G2 127 bp overlap
ZNF407 1 dataset
ChIP Hep-G2 ENCSR005WGY.ZNF407.Hep-G2 159 bp overlap
ZNF558 3 datasets
ChIP HEK293 ENCFF994JWH 175 bp overlap
ChIP HEK293 ENCSR447ZTA.ZNF558.HEK293 113 bp overlap
ChIP HEK293T GSE78099.ZNF558.HEK293T 79 bp overlap
ZNF579 2 datasets
ChIP MCF-7 ENCFF550XRS 165 bp overlap
ChIP MCF-7 ENCSR018MQH.ZNF579.MCF-7 190 bp overlap
ZNF687 1 dataset
ChIP HepG2 ENCFF653WIX 256 bp overlap
ZNF883 1 dataset
ChIP HepG2 ENCFF807XLY 256 bp overlap
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