chr11 : 110,355,026 110,355,373
347 bp 86 TFs 1 linked gene
This 347 bp open chromatin element is linked to LINC02732 and is bound by 86 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
LINC02732 at TSS At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr11:110,350,026 – 110,360,373
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
86 transcription factors
Source
Cell type
AFF4 2 datasets
ChIP HeLa_DOX GSE40632.AFF4.HeLa_DOX 265 bp overlap
ChIP HeLa_DOX_EGF GSE40632.AFF4.HeLa_DOX_EGF 194 bp overlap
ARID2 3 datasets
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.ARID2.BIN-67_lentivirus-SMARCA4 219 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.ARID2.BIN-67_lentivirus-SMARCA4-K785R 347 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.ARID2.BIN-67_lentivirus-SMARCA4-T910M 347 bp overlap
ARNT 2 datasets
ChIP 501-mel GSE95280.ARNT.501-mel 318 bp overlap
ChIP SK-MEL-28 GSE85352.ARNT.SK-MEL-28 347 bp overlap
ASH2L 2 datasets
ChIP H1 ENCFF399KAM 347 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 177 bp overlap
BRD2 1 dataset
ChIP SK-MEL-147 GSE94488.BRD2.SK-MEL-147 142 bp overlap
BRD3 1 dataset
ChIP HEK293T GSE39579.BRD3.HEK293T 129 bp overlap
BRD4 5 datasets
ChIP COLO-741 GSE73319.BRD4.COLO-741 152 bp overlap
ChIP HeLa_JQ1 GSE151038.BRD4.HeLa_JQ1 202 bp overlap
ChIP MCF-7_ARID1A-KO_4-OHT GSE123284.BRD4.MCF-7_ARID1A-KO_4-OHT 347 bp overlap
ChIP cortical-interneuron_R133C_KCl-neg_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-neg_JQ1-neg 285 bp overlap
ChIP cortical-interneuron_R133C_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-pos_JQ1-neg 205 bp overlap
CDK7 1 dataset
ChIP SK-MEL-147 GSE45984.CDK7.SK-MEL-147 291 bp overlap
CHD2 2 datasets
ChIP HeLa-S3 ENCFF078QRQ 343 bp overlap
ChIP HeLa-S3 ENCSR000ECP.CHD2.HeLa-S3 189 bp overlap
CHD4 3 datasets
ChIP 501-mel GSE134848.CHD4.501-mel 84 bp overlap
ChIP A-549 ENCSR550SCU.CHD4.A-549 178 bp overlap
ChIP SCMC GSE155861.CHD4.SCMC 263 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 224 bp overlap
CREB1 1 dataset
ChIP A-549 ENCSR000BRB.CREB1.A-549 119 bp overlap
CTCF 2 datasets
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 237 bp overlap
ChIP anterior-temporal-cortex_fetal GSE116825.CTCF.anterior-temporal-cortex_fetal 163 bp overlap
DPF2 3 datasets
ChIP BIN-67 GSE117734.DPF2.BIN-67 235 bp overlap
ChIP BIN-67_ctrl GSE117734.DPF2.BIN-67_ctrl 189 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.DPF2.BIN-67_lentivirus-SMARCA4-K785R 185 bp overlap
EGR1 1 dataset
ChIP T-HESCs GSE141063.EGR1.T-HESCs 154 bp overlap
ELF1 1 dataset
ChIP SK-N-MC_SHFLI_96H GSE61944.ELF1.SK-N-MC_SHFLI_96H 294 bp overlap
ELF3 1 dataset
ChIP PDAC_KOKLF5 GSE64557.ELF3.PDAC_KOKLF5 227 bp overlap
ERG 1 dataset
ChIP HUVEC-C GSE124891.ERG.HUVEC-C 97 bp overlap
ESR1 3 datasets
ChIP MCF-7_RAD001 GSE103023.ESR1.MCF-7_RAD001 205 bp overlap
ChIP endometrioid-adenocarcinoma_tumor_2 GSE94031.ESR1.endometrioid-adenocarcinoma_tumor_2 134 bp overlap
ChIP primary-endometrium-cancer_E1_DSG GSE114737.ESR1.primary-endometrium-cancer_E1_DSG 307 bp overlap
ESR2 1 dataset
Motif DE_12h DE_12h-ESR2_MA0258.2 15 bp overlap
ETS1 1 dataset
ChIP HUVEC-C_VEGF_12H GSE41166.ETS1.HUVEC-C_VEGF_12H 166 bp overlap
ETV6 2 datasets
ChIP GM12878 GSE97661.ETV6.GM12878 89 bp overlap
ChIP GM12878 ENCSR626VUC.ETV6.GM12878 63 bp overlap
EZH2 1 dataset
ChIP Pfeiffer GSE45982.EZH2.Pfeiffer 161 bp overlap
FEZF1 1 dataset
ChIP HEK293 GSE76494.FEZF1.HEK293 134 bp overlap
FLI1 10 datasets
ChIP A-673 GSE99959.FLI1.A-673 347 bp overlap
ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 347 bp overlap
ChIP A-673_2_KRAB_eSOX2_1 GSE106914.FLI1.A-673_2_KRAB_eSOX2_1 301 bp overlap
ChIP A-673_D11 GSE129155.FLI1.A-673_D11 263 bp overlap
ChIP A-673_D14 GSE129155.FLI1.A-673_D14 347 bp overlap
ChIP A-673_D17 GSE129155.FLI1.A-673_D17 265 bp overlap
ChIP SK-N-MC GSE61944.FLI1.SK-N-MC 264 bp overlap
ChIP SK-N-MC_SHGFP_48H GSE61944.FLI1.SK-N-MC_SHGFP_48H 153 bp overlap
ChIP SK-N-MC_SHGFP_96H GSE61944.FLI1.SK-N-MC_SHGFP_96H 281 bp overlap
ChIP UAE_ZINC GSE23730.FLI1.UAE_ZINC 85 bp overlap
FOXM1 2 datasets
ChIP MDA-MB-231 GSE40762.FOXM1.MDA-MB-231 224 bp overlap
ChIP MDA-MB-231_THIOS GSE40762.FOXM1.MDA-MB-231_THIOS 220 bp overlap
FOXP2 1 dataset
ChIP SK-N-MC ENCFF865YOS 285 bp overlap
GTF2B 1 dataset
ChIP HeLa_ASYNC GSE71848.GTF2B.HeLa_ASYNC 261 bp overlap
HDAC2 1 dataset
ChIP RH4_Entinostat-6H GSE116344.HDAC2.RH4_Entinostat-6H 252 bp overlap
HNF4A 3 datasets
ChIP Caco-2_DIFF GSE23436.HNF4A.Caco-2_DIFF 261 bp overlap
ChIP Hep-G2 ENCSR000BLF.HNF4A.Hep-G2 116 bp overlap
ChIP liver ERP002306.HNF4A.liver 265 bp overlap
HNF4G 1 dataset
ChIP Hep-G2 ENCSR000BNJ.HNF4G.Hep-G2 131 bp overlap
INTS11 1 dataset
ChIP HeLa GSE125534.INTS11.HeLa 125 bp overlap
KLF9 1 dataset
ChIP GBM1A GSE62211.KLF9.GBM1A 100 bp overlap
KMT2A 1 dataset
ChIP Hep-G2 ENCSR692GFR.KMT2A.Hep-G2 135 bp overlap
MAX 10 datasets
ChIP A-549 ENCSR000BTJ.MAX.A-549 230 bp overlap
ChIP A549 ENCFF310XGQ 305 bp overlap
ChIP H1 ENCFF914VQY 318 bp overlap
ChIP HeLa-S3 ENCFF398RFF 302 bp overlap
ChIP HeLa-S3 ENCSR000EZF.MAX.HeLa-S3 278 bp overlap
ChIP HeLa-S3 ENCSR000ECN.MAX.HeLa-S3 131 bp overlap
ChIP Hep-G2 ENCSR000BTM.MAX.Hep-G2 148 bp overlap
ChIP MCF-7 ENCFF169IXS 276 bp overlap
ChIP MCF-7 ENCSR000BUL.MAX.MCF-7 213 bp overlap
ChIP melanocyte GSE115845.MAX.melanocyte 193 bp overlap
MCM3 1 dataset
ChIP K-562 ENCSR990AZC.MCM3.K-562 145 bp overlap
MED1 5 datasets
ChIP HCT-116 GSE121798.MED1.HCT-116 71 bp overlap
ChIP HCT-116_shLuc GSE121798.MED1.HCT-116_shLuc 193 bp overlap
ChIP HCT-116_shLuc_thaps GSE121798.MED1.HCT-116_shLuc_thaps 170 bp overlap
ChIP HCT-116_thaps GSE121798.MED1.HCT-116_thaps 195 bp overlap
ChIP HUVEC-C_siCTL GSE124892.MED1.HUVEC-C_siCTL 129 bp overlap
MED26 2 datasets
ChIP HCT-116 GSE121355.MED26.HCT-116 241 bp overlap
ChIP HCT-116_aux GSE121355.MED26.HCT-116_aux 140 bp overlap
MEIS1 1 dataset
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
MITF 2 datasets
ChIP 501-mel GSE61965.MITF.501-mel 173 bp overlap
ChIP melanocyte_CTR GSE50681.MITF.melanocyte_CTR 262 bp overlap
MRTFB 1 dataset
ChIP A-673-clone-Asp114 GSE92738.MRTFB.A-673-clone-Asp114 347 bp overlap
MTA2 1 dataset
ChIP RH4 GSE155861.MTA2.RH4 135 bp overlap
MXI1 2 datasets
ChIP HeLa-S3 ENCFF947VEL 254 bp overlap
ChIP HeLa-S3 ENCFF947VEL 54 bp overlap
MYC 1 dataset
ChIP HeLa-S3 ENCSR000EZD.MYC.HeLa-S3 123 bp overlap
MYCN 2 datasets
ChIP Kelly_sensitive GSE115249.MYCN.Kelly_sensitive 141 bp overlap
ChIP SH-EP_MYCNER_plusOHT GSE111905.MYCN.SH-EP_MYCNER_plusOHT 111 bp overlap
NELFE 2 datasets
ChIP HeLa GSE125534.NELFE.HeLa 244 bp overlap
ChIP HeLa_DOX GSE125534.NELFE.HeLa_DOX 122 bp overlap
NEUROD1 1 dataset
ChIP D341-Med_shNEUROD1-1154 GSE92582.NEUROD1.D341-Med_shNEUROD1-1154 253 bp overlap
NFE2L2 1 dataset
ChIP A-375_DMSO GSE57431.NFE2L2.A-375_DMSO 168 bp overlap
NR5A2 1 dataset
ChIP A-549 ENCSR190GIW.NR5A2.A-549 245 bp overlap
PHIP 3 datasets
ChIP HCT-116_MLL1-KO__ab833 GSE101646.PHIP.HCT-116_MLL1-KO__ab833 325 bp overlap
ChIP HCT-116_ab833 GSE101646.PHIP.HCT-116_ab833 323 bp overlap
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 166 bp overlap
POLR2A 3 datasets
ChIP MCF-7 ENCFF411WCU 280 bp overlap
ChIP SK-N-MC ENCFF088IVG 347 bp overlap
ChIP adrenal gland ENCFF843OBJ 236 bp overlap
POU2F3 1 dataset
ChIP NCI-H1048 GSE115123.POU2F3.NCI-H1048 213 bp overlap
POU5F1 2 datasets
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 307 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 186 bp overlap
PRPF4 2 datasets
ChIP Hep-G2 GSE120104.PRPF4.Hep-G2 197 bp overlap
ChIP Hep-G2 ENCSR243LNQ.PRPF4.Hep-G2 232 bp overlap
RAD21 4 datasets
ChIP HAP1 GSE126634.RAD21.HAP1 332 bp overlap
ChIP HAP1 GSE152721.RAD21.HAP1 238 bp overlap
ChIP HAP1_CTCF GSE126634.RAD21.HAP1_CTCF 347 bp overlap
ChIP HEK293_siE1A GSE130135.RAD21.HEK293_siE1A 257 bp overlap
RBBP4 1 dataset
ChIP RH5 GSE155861.RBBP4.RH5 256 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 187 bp overlap
RELB 1 dataset
ChIP GM12878 ENCSR387QUV.RELB.GM12878 80 bp overlap
RXRA 2 datasets
ChIP liver ENCFF807CIA 347 bp overlap
ChIP liver ENCFF807CIA 165 bp overlap
SETDB1 2 datasets
ChIP HEK293 ENCSR348AGV.SETDB1.HEK293 217 bp overlap
ChIP U2OS ENCSR000EYD.SETDB1.U2OS 258 bp overlap
SMAD4 1 dataset
ChIP Caco-2 GSE112946.SMAD4.Caco-2 138 bp overlap
SMARCA2 2 datasets
ChIP SK-N-MC_shEWSFLI1 GSE94275.SMARCA2.SK-N-MC_shEWSFLI1 220 bp overlap
ChIP SK-N-MC_shGFP GSE94275.SMARCA2.SK-N-MC_shGFP 271 bp overlap
SMARCA4 9 datasets
ChIP 501-mel_SHCTR GSE61965.SMARCA4.501-mel_SHCTR 143 bp overlap
ChIP A-549_AG15689 GSE132290.SMARCA4.A-549_AG15689 195 bp overlap
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4 252 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-K785R 340 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-T910M 347 bp overlap
ChIP MCF-7_ARID1A-KO_4-OHT_clone14 GSE123284.SMARCA4.MCF-7_ARID1A-KO_4-OHT_clone14 209 bp overlap
ChIP MCF-7_ARID1A-KO_clone14 GSE123284.SMARCA4.MCF-7_ARID1A-KO_clone14 347 bp overlap
ChIP MCF-7_parental GSE123284.SMARCA4.MCF-7_parental 268 bp overlap
ChIP TTC-1240 GSE124903.SMARCA4.TTC-1240 125 bp overlap
SMARCB1 1 dataset
ChIP MCF-7_DCDT GSE123284.SMARCB1.MCF-7_DCDT 247 bp overlap
SMARCC1 10 datasets
ChIP BIN-67 GSE117734.SMARCC1.BIN-67 274 bp overlap
ChIP BIN-67_ctrl GSE117734.SMARCC1.BIN-67_ctrl 273 bp overlap
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SMARCC1.BIN-67_lentivirus-SMARCA4 242 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.SMARCC1.BIN-67_lentivirus-SMARCA4-K785R 320 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCC1.BIN-67_lentivirus-SMARCA4-T910M 275 bp overlap
ChIP HeLa-S3 ENCFF971JGA 326 bp overlap
ChIP HeLa-S3 ENCSR000EDM.SMARCC1.HeLa-S3 178 bp overlap
ChIP SK-N-MC GSE94275.SMARCC1.SK-N-MC 322 bp overlap
ChIP SK-N-MC_shEWSFLI1 GSE94275.SMARCC1.SK-N-MC_shEWSFLI1 119 bp overlap
ChIP SK-N-MC_shGFP GSE94275.SMARCC1.SK-N-MC_shGFP 196 bp overlap
SOX15 1 dataset
Motif DE_12h DE_12h-SOX15_MA1152.2 7 bp overlap
SOX2 1 dataset
ChIP HNSC GSE69479.SOX2.HNSC 314 bp overlap
SS18 2 datasets
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SS18.BIN-67_lentivirus-SMARCA4 217 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.SS18.BIN-67_lentivirus-SMARCA4-K785R 266 bp overlap
STAT3 1 dataset
ChIP HCC1187 GSE152203.STAT3.HCC1187 188 bp overlap
SUPT5H 2 datasets
ChIP HeLa GSE125534.SUPT5H.HeLa 217 bp overlap
ChIP HeLa_DOX GSE125534.SUPT5H.HeLa_DOX 265 bp overlap
Sox17 1 dataset
Motif DE_12h DE_12h-Sox17_MA0078.3 10 bp overlap
TAF1 1 dataset
ChIP HeLa-S3 ENCSR000BHT.TAF1.HeLa-S3 111 bp overlap
TBX21 1 dataset
ChIP GM12878 ENCSR739IHN.TBX21.GM12878 70 bp overlap
TERF2 1 dataset
ChIP LCL GSE55053.TERF2.LCL 134 bp overlap
TP53 1 dataset
ChIP hESC_DAMAGED GSE39912.TP53.hESC_DAMAGED 182 bp overlap
TRIM28 4 datasets
ChIP HEK293 ENCFF265CEM 347 bp overlap
ChIP HEK293 ENCSR000EUZ.TRIM28.HEK293 324 bp overlap
ChIP HEK293 ENCSR618HNF.TRIM28.HEK293 182 bp overlap
ChIP U2OS ENCSR000EYC.TRIM28.U2OS 182 bp overlap
YY1 1 dataset
ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 310 bp overlap
ZNF281 1 dataset
ChIP HepG2 ENCFF585QNU 300 bp overlap
ZNF300 1 dataset
ChIP HEK293T GSE78099.ZNF300.HEK293T 296 bp overlap
ZNF366 2 datasets
ChIP HEK293 ENCFF799ATK 90 bp overlap
ChIP HEK293 ENCSR106EBH.ZNF366.HEK293 92 bp overlap