chr11 : 93,765,352 93,766,055
703 bp 124 TFs 5 linked genes
This 703 bp open chromatin element is linked to 5 target genes and is bound by 124 transcription factors.
Linked Genes
5 genes
Gene Expression Dist. to TSS Distance Link type
MED17 18.5 kb Distal Multiome
C11orf54 24.2 kb Distal Multiome
TAF1D 24.3 kb Distal Multiome
CEP295 104.1 kb Distal Multiome
SMCO4 222.4 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr11:93,760,352 – 93,771,055
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
124 transcription factors
Source
Cell type
ARID3A 1 dataset
ChIP HepG2 ENCFF341DES 212 bp overlap
ARID5B 1 dataset
ChIP HepG2 ENCFF964FWK 182 bp overlap
ARNT2 1 dataset
Motif DE_48h DE_48h-ARNT2_MA1464.2 8 bp overlap
Arid3a 1 dataset
Motif DE_48h DE_48h-Arid3a_MA0151.1 6 bp overlap
Arnt 1 dataset
Motif DE_48h DE_48h-Arnt_MA0004.1 6 bp overlap
Arntl 1 dataset
Motif DE_48h DE_48h-Arntl_MA0603.2 8 bp overlap
BCL6 3 datasets
Motif DE_48h DE_48h-BCL6_MA0463.3 13 bp overlap
ChIP HepG2 ENCFF423EJH 94 bp overlap
ChIP HepG2 ENCFF423EJH 293 bp overlap
CEBPA 1 dataset
ChIP HepG2 ENCFF175DFS 231 bp overlap
CEBPG 1 dataset
ChIP HepG2 ENCFF503XBC 162 bp overlap
CREB3L4 1 dataset
Motif DE_48h DE_48h-CREB3L4_MA1474.2 10 bp overlap
CTCF 1 dataset
ChIP GSC23 GSE139416.CTCF.GSC23 111 bp overlap
DPF2 1 dataset
ChIP HepG2 ENCFF700HHQ 250 bp overlap
DUX4 1 dataset
ChIP WA01 GSE94322.DUX4.WA01 263 bp overlap
E2F8 1 dataset
ChIP HepG2 ENCFF117UYU 270 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 311 bp overlap
ESRRG 1 dataset
ChIP cardiomyocyte GSE113760.ESRRG.cardiomyocyte 345 bp overlap
FOXA2 1 dataset
ChIP DE DE-FOXA2-1 440 bp overlap
FOXK1 1 dataset
ChIP Hep-G2 ENCSR603BJQ.FOXK1.Hep-G2 157 bp overlap
FOXP1 1 dataset
ChIP Hep-G2 ENCSR369YUK.FOXP1.Hep-G2 115 bp overlap
FOXP4 2 datasets
ChIP Hep-G2 ENCSR232LLP.FOXP4.Hep-G2 59 bp overlap
ChIP HepG2 ENCFF462ULY 137 bp overlap
GABPA 1 dataset
ChIP liver ENCFF500III 222 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 568 bp overlap
ChIP DE DE-GATA4-2 586 bp overlap
ChIP G296S GSE85628.GATA4.G296S 244 bp overlap
ChIP G296S_2 GSE85628.GATA4.G296S_2 244 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 368 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 567 bp overlap
ChIP DE DE-GATA6-2 600 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 588 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 592 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 703 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 626 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 679 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 677 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 498 bp overlap
GATAD2A 1 dataset
ChIP HepG2 ENCFF252XNH 240 bp overlap
HDAC1 2 datasets
ChIP Hep-G2 ENCSR750OWO.HDAC1.Hep-G2 106 bp overlap
ChIP HepG2 ENCFF304IEJ 295 bp overlap
HDAC2 1 dataset
ChIP HepG2 ENCFF990GUQ 189 bp overlap
HNF1B 1 dataset
ChIP Hep-G2 ENCSR127XTZ.HNF1B.Hep-G2 201 bp overlap
HNF4A 6 datasets
ChIP Hep-G2 ENCSR469FBY.HNF4A.Hep-G2 125 bp overlap
ChIP Hep-G2 ENCSR000BLF.HNF4A.Hep-G2 68 bp overlap
ChIP HepG2 ENCFF146SSF 124 bp overlap
ChIP liver ENCFF354NRH 98 bp overlap
ChIP liver ENCFF449HPV 94 bp overlap
ChIP liver ENCFF449HPV 333 bp overlap
HOMEZ 2 datasets
ChIP HepG2 ENCFF800ZQH 142 bp overlap
ChIP HepG2 ENCFF800ZQH 344 bp overlap
HOXA3 1 dataset
ChIP Hep-G2 ENCSR999JKC.HOXA3.Hep-G2 144 bp overlap
IKZF5 1 dataset
ChIP HepG2 ENCFF641EBK 174 bp overlap
ISL1 1 dataset
ChIP SK-N-SH ENCFF285GEQ 485 bp overlap
ISL2 1 dataset
Motif DE_48h DE_48h-ISL2_MA0914.2 6 bp overlap
JUN 1 dataset
ChIP DE_D2 S02-DE-d2-JUN-exp1 329 bp overlap
KMT2A 1 dataset
ChIP Hep-G2 ENCSR692GFR.KMT2A.Hep-G2 142 bp overlap
LCOR 1 dataset
ChIP HepG2 ENCFF499KCU 115 bp overlap
LCORL 2 datasets
ChIP HepG2 ENCFF017FTI 210 bp overlap
ChIP HepG2 ENCFF017FTI 410 bp overlap
LIN54 1 dataset
ChIP Hep-G2 ENCSR597MCV.LIN54.Hep-G2 104 bp overlap
MAX 3 datasets
Motif DE_48h DE_48h-MAX_MA0058.4 6 bp overlap
ChIP Hep-G2 ENCSR168DYA.MAX.Hep-G2 124 bp overlap
ChIP HepG2 ENCFF507HCX 209 bp overlap
MAX::MYC 1 dataset
Motif DE_48h DE_48h-MAXMYC_MA0059.2 10 bp overlap
MED1 2 datasets
ChIP Hep-G2 ENCSR959XNY.MED1.Hep-G2 121 bp overlap
ChIP HepG2 ENCFF495TSS 149 bp overlap
MEIS1 2 datasets
Motif DE_48h DE_48h-MEIS1_MA0498.3 5 bp overlap
ChIP HepG2 ENCFF706DID 370 bp overlap
MEIS3 1 dataset
Motif DE_48h DE_48h-MEIS3_MA0775.2 7 bp overlap
MITF 4 datasets
ChIP 501-mel GSE137522.MITF.501-mel 237 bp overlap
Motif DE_48h DE_48h-MITF_MA0620.4 10 bp overlap
ChIP K-562 ENCSR797SWM.MITF.K-562 336 bp overlap
ChIP K562 ENCFF731XJJ 425 bp overlap
MLX 1 dataset
Motif DE_48h DE_48h-MLX_MA0663.1 10 bp overlap
MLXIPL 1 dataset
Motif DE_48h DE_48h-MLXIPL_MA0664.2 8 bp overlap
MNT 1 dataset
Motif DE_48h DE_48h-MNT_MA0825.2 6 bp overlap
MXD4 1 dataset
ChIP Hep-G2 ENCSR441KFW.MXD4.Hep-G2 89 bp overlap
MYC 1 dataset
Motif DE_48h DE_48h-MYC_MA0147.4 8 bp overlap
Mlxip 1 dataset
Motif DE_48h DE_48h-Mlxip_MA0622.2 6 bp overlap
NACC2 1 dataset
ChIP HepG2 ENCFF165SVB 168 bp overlap
NFIA 1 dataset
ChIP HepG2 ENCFF815HWK 96 bp overlap
NFIX 1 dataset
Motif DE_48h DE_48h-NFIX_MA1528.2 14 bp overlap
NKX2-3 1 dataset
Motif DE_48h DE_48h-NKX2-3_MA0672.2 8 bp overlap
Nkx3-1 1 dataset
Motif DE_48h DE_48h-Nkx3-1_MA0124.3 7 bp overlap
Nkx3-2 1 dataset
Motif DE_48h DE_48h-Nkx3-2_MA0122.4 10 bp overlap
OSR2 1 dataset
Motif DE_48h DE_48h-OSR2_MA1646.2 8 bp overlap
PAXIP1 2 datasets
ChIP Hep-G2 ENCSR530ARJ.PAXIP1.Hep-G2 123 bp overlap
ChIP HepG2 ENCFF526NOJ 232 bp overlap
PBX2 1 dataset
ChIP K-562 ENCSR263DFP.PBX2.K-562 232 bp overlap
PDX1 4 datasets
ChIP hESC GSE58685.PDX1.hESC 187 bp overlap
ChIP hiPSC GSE125768.PDX1.hiPSC 283 bp overlap
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 308 bp overlap
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 528 bp overlap
PHF5A 1 dataset
ChIP Hep-G2 ENCSR191TLD.PHF5A.Hep-G2 123 bp overlap
POGZ 1 dataset
ChIP HepG2 ENCFF153UUK 287 bp overlap
POLR2G 1 dataset
ChIP HepG2 ENCFF508UTS 354 bp overlap
POU2F1 1 dataset
ChIP HepG2 ENCFF422JZU 269 bp overlap
RARA 1 dataset
ChIP HepG2 ENCFF582XUA 109 bp overlap
RREB1 1 dataset
Motif DE_48h DE_48h-RREB1_MA0073.2 19 bp overlap
RXRA 2 datasets
ChIP liver ENCFF077DAP 166 bp overlap
ChIP liver ENCFF807CIA 185 bp overlap
RXRB 2 datasets
ChIP HepG2 ENCFF539ZAY 105 bp overlap
ChIP HepG2 ENCFF539ZAY 305 bp overlap
SALL1 1 dataset
ChIP HepG2 ENCFF426MCK 254 bp overlap
SMAD2-3 4 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 523 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 486 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 435 bp overlap
ChIP HUVEC-C_TGFB1 GSE134556.SMAD2-3.HUVEC-C_TGFB1 485 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 268 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 402 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 423 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 470 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 507 bp overlap
SMAD4 1 dataset
ChIP HepG2 ENCFF615GTE 71 bp overlap
SMARCC1 1 dataset
ChIP DE_D1 S15-DE-d1-BAF155-exp1 243 bp overlap
SOX13 1 dataset
ChIP HepG2 ENCFF062VSQ 88 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 379 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 475 bp overlap
SOX5 1 dataset
ChIP HepG2 ENCFF470KZD 206 bp overlap
SOX6 2 datasets
ChIP Hep-G2 ENCSR766TSU.SOX6.Hep-G2 131 bp overlap
ChIP HepG2 ENCFF767OCK 227 bp overlap
SP1 3 datasets
ChIP liver ENCFF597LFJ 172 bp overlap
ChIP liver ENCFF597LFJ 371 bp overlap
ChIP liver ENCFF769YSM 256 bp overlap
SP5 1 dataset
ChIP Hep-G2 ENCSR019NPF.SP5.Hep-G2 97 bp overlap
SREBF1 1 dataset
Motif DE_48h DE_48h-SREBF1_MA0829.3 10 bp overlap
SREBF2 1 dataset
Motif DE_48h DE_48h-SREBF2_MA0828.3 10 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 231 bp overlap
TEAD3 1 dataset
ChIP HepG2 ENCFF054UUL 283 bp overlap
TFAP4 3 datasets
Motif DE_48h DE_48h-TFAP4_MA1570.1 10 bp overlap
ChIP HepG2 ENCFF030SRU 56 bp overlap
ChIP HepG2 ENCFF932XOY 90 bp overlap
TFE3 2 datasets
Motif DE_48h DE_48h-TFE3_MA0831.3 10 bp overlap
ChIP K562 ENCFF697ABG 317 bp overlap
TFEB 1 dataset
Motif DE_48h DE_48h-TFEB_MA0692.2 8 bp overlap
TFEC 1 dataset
Motif DE_48h DE_48h-TFEC_MA0871.3 8 bp overlap
USF1 1 dataset
ChIP SK-N-SH ENCSR000BMF.USF1.SK-N-SH 141 bp overlap
USF2 1 dataset
Motif DE_48h DE_48h-USF2_MA0526.5 10 bp overlap
YY1 1 dataset
ChIP liver ENCFF400MBC 232 bp overlap
ZBTB24 1 dataset
Motif DE_48h DE_48h-ZBTB24_MA2330.1 10 bp overlap
ZBTB3 1 dataset
ChIP HepG2 ENCFF224AQL 375 bp overlap
ZBTB33 1 dataset
ChIP HepG2 ENCFF778UKV 260 bp overlap
ZBTB38 1 dataset
ChIP HepG2 ENCFF875UQX 281 bp overlap
ZGPAT 1 dataset
ChIP Hep-G2 ENCSR704IGU.ZGPAT.Hep-G2 179 bp overlap
ZMAT3 1 dataset
ChIP HepG2 ENCFF053XGJ 253 bp overlap
ZMYM3 1 dataset
ChIP HepG2 ENCFF408KTI 237 bp overlap
ZMYM4 1 dataset
ChIP HepG2 ENCFF567SQY 290 bp overlap
ZNF121 4 datasets
ChIP HEK293 ENCSR224QDY.ZNF121.HEK293 157 bp overlap
ChIP Hep-G2 ENCSR945QEW.ZNF121.Hep-G2 185 bp overlap
ChIP HepG2 ENCFF343YSL 261 bp overlap
ChIP K562 ENCFF314GND 231 bp overlap
ZNF217 2 datasets
ChIP Hep-G2 ENCSR055FQB.ZNF217.Hep-G2 129 bp overlap
ChIP HepG2 ENCFF455XGO 196 bp overlap
ZNF230 2 datasets
ChIP HepG2 ENCFF370ATB 349 bp overlap
ChIP HepG2 ENCFF370ATB 567 bp overlap
ZNF416 1 dataset
Motif DE_48h DE_48h-ZNF416_MA1979.2 10 bp overlap
ZNF441 1 dataset
ChIP HepG2 ENCFF738UDK 192 bp overlap
ZNF460 1 dataset
ChIP HepG2 ENCFF007NNM 267 bp overlap
ZNF48 1 dataset
ChIP HepG2 ENCFF362CDQ 333 bp overlap
ZNF556 1 dataset
ChIP HepG2 ENCFF008WIK 296 bp overlap
ZNF614 2 datasets
ChIP HepG2 ENCFF677IUD 174 bp overlap
ChIP HepG2 ENCFF677IUD 333 bp overlap
ZNF687 1 dataset
ChIP HepG2 ENCFF653WIX 445 bp overlap
ZNF766 2 datasets
Motif DE_48h DE_48h-ZNF766_MA2098.1 9 bp overlap
ChIP Hep-G2 ENCSR869RSW.ZNF766.Hep-G2 148 bp overlap
ZNF770 5 datasets
ChIP HEK293 ENCFF468FCG 107 bp overlap
ChIP HEK293 ENCSR242BGR.ZNF770.HEK293 67 bp overlap
ChIP Hep-G2 ENCSR510GKB.ZNF770.Hep-G2 188 bp overlap
ChIP Hep-G2 ENCSR510GKB.ZNF770.Hep-G2 56 bp overlap
ChIP HepG2 ENCFF233UVH 179 bp overlap