chr8 : 75,324,205 75,324,787
582 bp 101 TFs 1 linked gene
This 582 bp open chromatin element is linked to CASC9 and is bound by 101 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
CASC9 at TSS At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr8:75,319,205 – 75,329,787
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
101 transcription factors
Source
Cell type
ATF4 1 dataset
Motif DE_12h DE_12h-ATF4_MA0833.3 10 bp overlap
BRD2 11 datasets
ChIP HCC1806_BAZ2B_JQ1 GSE116879.BRD2.HCC1806_BAZ2B_JQ1 78 bp overlap
ChIP HCC1806_BAZ2BsiRNA GSE116879.BRD2.HCC1806_BAZ2BsiRNA 117 bp overlap
ChIP HCC1806_NTsiRNA GSE116879.BRD2.HCC1806_NTsiRNA 155 bp overlap
ChIP HCC1806_NTsiRNA_JQ1 GSE116879.BRD2.HCC1806_NTsiRNA_JQ1 116 bp overlap
ChIP SUM159PT_DMSO GSE116879.BRD2.SUM159PT_DMSO 85 bp overlap
ChIP SUM159PT_DMSO GSE131097.BRD2.SUM159PT_DMSO 121 bp overlap
ChIP SUM159PT_MGSK2801 GSE116879.BRD2.SUM159PT_MGSK2801 92 bp overlap
ChIP THP-1_DMSO GSE138084.BRD2.THP-1_DMSO 218 bp overlap
ChIP THP-1_iBET GSE138084.BRD2.THP-1_iBET 204 bp overlap
ChIP THP-1_iBET-BD1 GSE138084.BRD2.THP-1_iBET-BD1 204 bp overlap
ChIP THP-1_iBET-BD2 GSE138084.BRD2.THP-1_iBET-BD2 228 bp overlap
BRD4 26 datasets
ChIP CHL-1 GSE95585.BRD4.CHL-1 82 bp overlap
ChIP NCI-H1963 GSE145028.BRD4.NCI-H1963 85 bp overlap
ChIP NCI-H1963_shASXL3 GSE145028.BRD4.NCI-H1963_shASXL3 185 bp overlap
ChIP NCI-H1963_shNONT GSE145028.BRD4.NCI-H1963_shNONT 197 bp overlap
ChIP SUM159PT_100nMtrametinib_1h GSE87418.BRD4.SUM159PT_100nMtrametinib_1h 154 bp overlap
ChIP SUM159PT_100nMtrametinib_24h GSE87418.BRD4.SUM159PT_100nMtrametinib_24h 73 bp overlap
ChIP SUM159PT_100nMtrametinib_4h GSE87418.BRD4.SUM159PT_100nMtrametinib_4h 104 bp overlap
ChIP SUM159PT_100nMtrametinib_72h GSE87418.BRD4.SUM159PT_100nMtrametinib_72h 128 bp overlap
ChIP SUM159PT_100nMtrametinib_8h GSE87418.BRD4.SUM159PT_100nMtrametinib_8h 142 bp overlap
ChIP SUM159PT_30nMbortezomib_8h GSE87418.BRD4.SUM159PT_30nMbortezomib_8h 97 bp overlap
ChIP SUM159PT_DMSO GSE131097.BRD4.SUM159PT_DMSO 111 bp overlap
ChIP SUM159PT_DMSO_24h GSE87418.BRD4.SUM159PT_DMSO_24h 56 bp overlap
ChIP SUM159PT_DMSO_48h GSE87418.BRD4.SUM159PT_DMSO_48h 93 bp overlap
ChIP SUM159PT_DMSO_72h GSE87418.BRD4.SUM159PT_DMSO_72h 87 bp overlap
ChIP SUM159PT_DMSO_8h GSE87418.BRD4.SUM159PT_DMSO_8h 155 bp overlap
ChIP SUM159PT_Dox_48h GSE87418.BRD4.SUM159PT_Dox_48h 118 bp overlap
ChIP SUM159PT_scramble GSE131097.BRD4.SUM159PT_scramble 147 bp overlap
ChIP SUM159PT_shMYC_DMSO_48h GSE87418.BRD4.SUM159PT_shMYC_DMSO_48h 90 bp overlap
ChIP SUM159PT_shMYC_dox_48h GSE87418.BRD4.SUM159PT_shMYC_dox_48h 117 bp overlap
ChIP SUM229PE_neg_30nMtrametinib_24h GSE87418.BRD4.SUM229PE_neg_30nMtrametinib_24h 123 bp overlap
ChIP SUM229PE_neg_DMSO_24h GSE87418.BRD4.SUM229PE_neg_DMSO_24h 132 bp overlap
ChIP SUM229PE_pos_30nMtrametinib_24h GSE87418.BRD4.SUM229PE_pos_30nMtrametinib_24h 78 bp overlap
ChIP SUM229PE_pos_DMSO_24h GSE87418.BRD4.SUM229PE_pos_DMSO_24h 115 bp overlap
ChIP THP-1_DMSO-PMA GSE138084.BRD4.THP-1_DMSO-PMA 119 bp overlap
ChIP THP-1_iBET-BD2 GSE138084.BRD4.THP-1_iBET-BD2 152 bp overlap
ChIP cortical-interneuron_R133C_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-pos_JQ1-neg 67 bp overlap
CDK8 1 dataset
ChIP SET-2 GSE65138.CDK8.SET-2 108 bp overlap
CEBPB 1 dataset
ChIP A549 ENCFF781RLJ 321 bp overlap
CEBPG 1 dataset
Motif DE_12h DE_12h-CEBPG_MA1636.2 10 bp overlap
CTCF 1 dataset
Motif DE_12h DE_12h-CTCF_MA1930.2 33 bp overlap
Cebpa 2 datasets
ChIP BLaER1 ENCFF274GAT 238 bp overlap
ChIP BLaER1 ENCFF896HSY 294 bp overlap
DMAP1 1 dataset
ChIP HepG2 ENCFF247MSU 548 bp overlap
EGR1 1 dataset
ChIP HepG2 ENCFF674RQO 504 bp overlap
EGR2 1 dataset
ChIP HEK293 ENCFF336LFH 422 bp overlap
ESR1 2 datasets
ChIP MCF-7 ENCFF004AKH 333 bp overlap
ChIP MCF-7 ENCFF004AKH 359 bp overlap
ESR2 1 dataset
Motif DE_12h DE_12h-ESR2_MA0258.2 15 bp overlap
Ebf2 1 dataset
Motif DE_12h DE_12h-Ebf2_MA1604.2 9 bp overlap
FERD3L 1 dataset
Motif DE_12h DE_12h-FERD3L_MA1485.1 14 bp overlap
FEZF1 2 datasets
ChIP HEK293 ENCFF528YED 423 bp overlap
ChIP HEK293 ENCFF528YED 212 bp overlap
FIGLA 1 dataset
Motif DE_12h DE_12h-FIGLA_MA0820.2 6 bp overlap
FOXA1 1 dataset
ChIP MCF-7 ENCFF465LTH 123 bp overlap
FOXA2 4 datasets
ChIP DE DE-FOXA2-1 421 bp overlap
ChIP DE DE-FOXA2-2 379 bp overlap
ChIP HepG2 ENCFF570ABM 339 bp overlap
ChIP HepG2 ENCFF894AYY 381 bp overlap
FOXA3 1 dataset
ChIP K562 ENCFF781VSC 311 bp overlap
FOXF2 1 dataset
ChIP A549 ENCFF148XDC 345 bp overlap
GLIS2 1 dataset
ChIP HEK293 ENCFF446EIF 235 bp overlap
HIC1 1 dataset
ChIP HEK293 ENCFF252CFL 418 bp overlap
IKZF3 1 dataset
ChIP HEK293 ENCFF518OXG 371 bp overlap
INO80 1 dataset
ChIP Huh-7 GSE97411.INO80.Huh-7 108 bp overlap
JUN 2 datasets
ChIP A549 ENCFF846DUV 544 bp overlap
Motif DE_12h DE_12h-JUN_MA0488.2 10 bp overlap
JUND 1 dataset
Motif DE_12h DE_12h-JUND_MA0492.2 11 bp overlap
KLF1 1 dataset
ChIP HEK293 ENCFF159QSW 437 bp overlap
KLF12 1 dataset
Motif DE_12h DE_12h-KLF12_MA0742.2 9 bp overlap
KLF17 2 datasets
Motif DE_12h DE_12h-KLF17_MA1514.2 14 bp overlap
ChIP HEK293 ENCFF658MHR 425 bp overlap
KLF5 1 dataset
ChIP ESO-26 GSE132680.KLF5.ESO-26 108 bp overlap
KLF8 1 dataset
ChIP HEK293 ENCFF929IAJ 457 bp overlap
KMT2A 2 datasets
ChIP HEK293T_N-term_shCtrl GSE90762.KMT2A.HEK293T_N-term_shCtrl 78 bp overlap
ChIP HEK293T_N-term_shCtrl_TASP1-KO GSE90762.KMT2A.HEK293T_N-term_shCtrl_TASP1-KO 108 bp overlap
KMT2B 3 datasets
ChIP HEK293T_C-term GSE90762.KMT2B.HEK293T_C-term 159 bp overlap
ChIP HEK293T_C-term_C104 GSE90762.KMT2B.HEK293T_C-term_C104 106 bp overlap
ChIP HEK293T_C-term_C49 GSE90762.KMT2B.HEK293T_C-term_C49 207 bp overlap
L3MBTL2 1 dataset
ChIP HEK293T ENCFF482NJV 509 bp overlap
LEF1 1 dataset
ChIP HEK293T ENCFF869LPS 351 bp overlap
MAX 1 dataset
ChIP A549 ENCFF310XGQ 455 bp overlap
MED26 2 datasets
ChIP HCT-116 GSE121355.MED26.HCT-116 248 bp overlap
ChIP HCT-116_aux GSE121355.MED26.HCT-116_aux 232 bp overlap
MEIS1 1 dataset
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
NELFE 1 dataset
ChIP HeLa GSE125534.NELFE.HeLa 88 bp overlap
NFRKB 1 dataset
ChIP HEK293T ENCFF538OWZ 371 bp overlap
NR1D1 1 dataset
Motif DE_12h DE_12h-NR1D1_MA1531.2 14 bp overlap
NR1D2 1 dataset
Motif DE_12h DE_12h-NR1D2_MA1532.2 15 bp overlap
NR1I2 2 datasets
Motif DE_12h DE_12h-NR1I2_MA1533.2 15 bp overlap
Motif DE_12h DE_12h-NR1I2_MA1533.2 15 bp overlap
NR2F1 2 datasets
Motif DE_12h DE_12h-NR2F1_MA0017.3 12 bp overlap
ChIP HepG2 ENCFF518ZRY 397 bp overlap
Nr2F6 1 dataset
Motif DE_12h DE_12h-Nr2F6_MA0728.1 15 bp overlap
PATZ1 1 dataset
ChIP HEK293 ENCFF016MNJ 495 bp overlap
PHIP 1 dataset
ChIP HCT-116_MLL4-SET-KO_ab833 GSE101646.PHIP.HCT-116_MLL4-SET-KO_ab833 91 bp overlap
POLR2A 4 datasets
ChIP HepG2 ENCFF350RIU 517 bp overlap
ChIP K562 ENCFF215CWW 548 bp overlap
ChIP K562 ENCFF215CWW 224 bp overlap
ChIP transverse colon ENCFF193UMS 403 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 510 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 418 bp overlap
PRDM1 1 dataset
ChIP HEK293 ENCFF302TBP 421 bp overlap
PRDM10 1 dataset
ChIP HEK293 ENCFF145WQQ 260 bp overlap
RARA 1 dataset
Motif DE_12h DE_12h-RARA_MA0729.1 18 bp overlap
RBPJ 2 datasets
Motif DE_12h DE_12h-RBPJ_MA1116.2 6 bp overlap
Motif DE_12h DE_12h-RBPJ_MA1116.2 6 bp overlap
RELA 1 dataset
Motif DE_12h DE_12h-RELA_MA0107.1 10 bp overlap
REST 1 dataset
ChIP A-549 ENCSR000BQP.REST.A-549 77 bp overlap
RUVBL2 3 datasets
ChIP U2OS GSE130602.RUVBL2.U2OS 261 bp overlap
ChIP U2OS_DMSO GSE130507.RUVBL2.U2OS_DMSO 210 bp overlap
ChIP U2OS_cordycepin GSE130507.RUVBL2.U2OS_cordycepin 210 bp overlap
RXRA::VDR 2 datasets
Motif DE_12h DE_12h-RXRAVDR_MA0074.1 15 bp overlap
Motif DE_12h DE_12h-RXRAVDR_MA0074.1 15 bp overlap
Rarb 1 dataset
Motif DE_12h DE_12h-Rarb_MA0857.1 16 bp overlap
Rarg 1 dataset
Motif DE_12h DE_12h-Rarg_MA0859.2 15 bp overlap
SIN3A 1 dataset
ChIP A549 ENCFF752ATT 227 bp overlap
SMAD2 1 dataset
Motif DE_12h DE_12h-SMAD2_MA1964.2 6 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 380 bp overlap
SOX6 1 dataset
ChIP HepG2 ENCFF767OCK 542 bp overlap
SP7 1 dataset
ChIP HEK293 ENCFF733RBE 520 bp overlap
SUPT5H 2 datasets
ChIP HeLa GSE125534.SUPT5H.HeLa 92 bp overlap
ChIP HeLa_DOX GSE125534.SUPT5H.HeLa_DOX 92 bp overlap
TAF1 4 datasets
ChIP A-549 ENCSR000BPF.TAF1.A-549 168 bp overlap
ChIP HepG2 ENCFF946IUP 571 bp overlap
ChIP K-562 ENCSR000BKS.TAF1.K-562 102 bp overlap
ChIP SK-N-SH ENCSR000BQF.TAF1.SK-N-SH 99 bp overlap
TAF7 1 dataset
ChIP K562 ENCFF314WLE 331 bp overlap
TCF4 1 dataset
Motif DE_12h DE_12h-TCF4_MA0830.3 8 bp overlap
TCF7L1 1 dataset
Motif DE_12h DE_12h-TCF7L1_MA1421.1 12 bp overlap
TGIF1 1 dataset
Motif DE_12h DE_12h-TGIF1_MA0796.1 12 bp overlap
TGIF2 1 dataset
Motif DE_12h DE_12h-TGIF2_MA0797.1 12 bp overlap
TGIF2LX 1 dataset
Motif DE_12h DE_12h-TGIF2LX_MA1571.1 12 bp overlap
TGIF2LY 1 dataset
Motif DE_12h DE_12h-TGIF2LY_MA1572.1 12 bp overlap
VDR 1 dataset
ChIP THP-1_1d_1-25-OH-2D3 GSE89431.VDR.THP-1_1d_1-25-OH-2D3 145 bp overlap
YY1 11 datasets
ChIP A-549 ENCSR000BPM.YY1.A-549 128 bp overlap
ChIP HCT-116 ENCSR000BNX.YY1.HCT-116 81 bp overlap
ChIP HEK293 ENCFF734SBY 125 bp overlap
ChIP Hep-G2 ENCSR000BNT.YY1.Hep-G2 126 bp overlap
ChIP Hep-G2_NC GSE120104.YY1.Hep-G2_NC 197 bp overlap
ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 176 bp overlap
ChIP K-562 ENCSR000BMH.YY1.K-562 87 bp overlap
ChIP K-562 ENCSR000BKU.YY1.K-562 98 bp overlap
ChIP SK-N-SH ENCSR000BSM.YY1.SK-N-SH 107 bp overlap
ChIP SK-N-SH ENCSR000BLZ.YY1.SK-N-SH 109 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 110 bp overlap
ZBTB10 1 dataset
ChIP HEK293 ENCFF679BCK 416 bp overlap
ZBTB17 1 dataset
ChIP HEK293 ENCFF865LIO 365 bp overlap
ZBTB20 1 dataset
ChIP HEK293 ENCFF524ADK 293 bp overlap
ZBTB26 3 datasets
ChIP HEK293 ENCFF752POA 577 bp overlap
ChIP HEK293 ENCFF752POA 579 bp overlap
ChIP HEK293 ENCFF752TCU 404 bp overlap
ZBTB8A 2 datasets
ChIP HEK293 ENCFF303WRD 336 bp overlap
ChIP HEK293 ENCFF303WRD 162 bp overlap
ZEB1 1 dataset
Motif DE_12h DE_12h-ZEB1_MA0103.4 6 bp overlap
ZFHX2 1 dataset
ChIP HEK293 ENCFF167TUA 471 bp overlap
ZFP37 2 datasets
ChIP HEK293 ENCFF968PWB 415 bp overlap
ChIP HEK293 ENCFF968PWB 444 bp overlap
ZFP69B 1 dataset
ChIP HEK293 ENCFF942LFP 333 bp overlap
ZNF189 2 datasets
ChIP HEK293 ENCFF638TIB 501 bp overlap
ChIP HEK293 ENCFF638TIB 351 bp overlap
ZNF281 2 datasets
ChIP HepG2 ENCFF585QNU 325 bp overlap
ChIP K562 ENCFF594VNM 259 bp overlap
ZNF335 1 dataset
ChIP HEK293 ENCFF784SLD 393 bp overlap
ZNF341 1 dataset
ChIP HEK293 ENCFF944VMC 514 bp overlap
ZNF423 1 dataset
ChIP HEK293 ENCFF937QHI 349 bp overlap
ZNF501 1 dataset
ChIP HEK293 ENCFF066RAQ 435 bp overlap
ZNF629 1 dataset
ChIP HEK293 ENCFF096ELQ 493 bp overlap
ZNF671 1 dataset
ChIP WTC11 ENCFF053HBV 265 bp overlap
ZNF687 2 datasets
ChIP HepG2 ENCFF653WIX 574 bp overlap
ChIP HepG2 ENCFF653WIX 348 bp overlap
Zfp809 1 dataset
Motif DE_12h DE_12h-Zfp809_MA2125.1 9 bp overlap
Zfp961 2 datasets
Motif DE_12h DE_12h-Zfp961_MA2126.1 8 bp overlap
Motif DE_24h DE_24h-Zfp961_MA2126.1 8 bp overlap