chr8 : 38,471,859 38,472,443
584 bp 84 TFs 7 linked genes
This 584 bp open chromatin element is linked to 7 target genes and is bound by 84 transcription factors.
Linked Genes
7 genes
Distance
Link type
Gene Expression Dist. to TSS Distance Link type
FGFR1 3.2 kb Proximal Proximity
NSD3 89.9 kb Distal Multiome
PLPP5 203.0 kb Distal Multiome
DDHD2 240.6 kb Distal Multiome
TACC1 285.1 kb Distal Multiome
BAG4 295.3 kb Distal Multiome
LSM1 295.5 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr8:38,466,859 – 38,477,443
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
84 transcription factors
Source
Cell type
AR 4 datasets
ChIP MCF-7 ERP001226.AR.MCF-7 179 bp overlap
ChIP VCaP_R1881_30M GSE84432.AR.VCaP_R1881_30M 137 bp overlap
ChIP breast_tumor_Male_17 GSE104399.AR.breast_tumor_Male_17 380 bp overlap
ChIP breast_tumor_Male_17 GSE104399.AR.breast_tumor_Male_17 142 bp overlap
ARID2 3 datasets
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.ARID2.BIN-67_lentivirus-SMARCA4 252 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.ARID2.BIN-67_lentivirus-SMARCA4-K785R 584 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.ARID2.BIN-67_lentivirus-SMARCA4-T910M 221 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 584 bp overlap
ATRX 1 dataset
ChIP metastatic-neuroblastoma_SKNMM GSE100148.ATRX.metastatic-neuroblastoma_SKNMM 272 bp overlap
BCL11A 13 datasets
ChIP CD34_Day3_30min GSE104676.BCL11A.CD34_Day3_30min 93 bp overlap
ChIP CD34_Day5_30min GSE104676.BCL11A.CD34_Day5_30min 73 bp overlap
ChIP CD34_Day7_15min GSE104676.BCL11A.CD34_Day7_15min 87 bp overlap
ChIP CD34_Day7_30min GSE104676.BCL11A.CD34_Day7_30min 129 bp overlap
ChIP CD34_Day7_60min GSE104676.BCL11A.CD34_Day7_60min 91 bp overlap
ChIP CD34_Day7_90min GSE104676.BCL11A.CD34_Day7_90min 121 bp overlap
ChIP CD34_Day9_15min GSE104676.BCL11A.CD34_Day9_15min 101 bp overlap
ChIP CD34_Day9_30min GSE104676.BCL11A.CD34_Day9_30min 143 bp overlap
ChIP CD34_Day9_60min GSE104676.BCL11A.CD34_Day9_60min 112 bp overlap
ChIP CD34_Day9_90min GSE104676.BCL11A.CD34_Day9_90min 137 bp overlap
ChIP HUDEP-2_30min GSE104676.BCL11A.HUDEP-2_30min 221 bp overlap
ChIP HUDEP-2_90min GSE104676.BCL11A.HUDEP-2_90min 225 bp overlap
ChIP HUDEP-2_BCL11A-ER-V5 GSE103445.BCL11A.HUDEP-2_BCL11A-ER-V5 246 bp overlap
BCOR 3 datasets
ChIP WA01 GSE104690.BCOR.WA01 244 bp overlap
ChIP WA01_KDM2B_KO GSE104690.BCOR.WA01_KDM2B_KO 168 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 253 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 533 bp overlap
BRD3 2 datasets
ChIP K-562_DMSO-IFNG GSE138084.BRD3.K-562_DMSO-IFNG 292 bp overlap
ChIP K-562_iBET-BD1-IFNG GSE138084.BRD3.K-562_iBET-BD1-IFNG 242 bp overlap
BRD4 8 datasets
ChIP COLO-741 GSE73319.BRD4.COLO-741 291 bp overlap
ChIP HAP1 GSE108387.BRD4.HAP1 584 bp overlap
ChIP K-562_DMSO GSE138084.BRD4.K-562_DMSO 329 bp overlap
ChIP K-562_iBET-BD1-IFNG GSE138084.BRD4.K-562_iBET-BD1-IFNG 180 bp overlap
ChIP K-562_iBET-BD2-IFNG GSE138084.BRD4.K-562_iBET-BD2-IFNG 370 bp overlap
ChIP K-562_iBET-IFNG GSE138084.BRD4.K-562_iBET-IFNG 303 bp overlap
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 426 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 287 bp overlap
CDK6 1 dataset
ChIP KB_IL GSE52469.CDK6.KB_IL 100 bp overlap
CHD4 1 dataset
ChIP RH5 GSE155861.CHD4.RH5 471 bp overlap
CTCF 1 dataset
ChIP cortical-interneuron_KCl-pos_JQ1-pos GSE117508.CTCF.cortical-interneuron_KCl-pos_JQ1-pos 131 bp overlap
Cebpa 2 datasets
ChIP BLaER1 ENCFF031ISE 297 bp overlap
ChIP BLaER1 ENCFF262VBH 101 bp overlap
DPF2 2 datasets
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.DPF2.BIN-67_lentivirus-SMARCA4-K785R 584 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.DPF2.BIN-67_lentivirus-SMARCA4-T910M 170 bp overlap
EP300 2 datasets
ChIP SK-N-SH ENCFF829RWA 377 bp overlap
ChIP SK-N-SH ENCSR000EHV.EP300.SK-N-SH 150 bp overlap
ESR1 17 datasets
ChIP MCF-7 GSE68355.ESR1.MCF-7 226 bp overlap
ChIP MCF-7 GSE41561.ESR1.MCF-7 179 bp overlap
ChIP MCF-7_AZD2014 GSE103023.ESR1.MCF-7_AZD2014 170 bp overlap
ChIP MCF-7_D538G GSE148277.ESR1.MCF-7_D538G 281 bp overlap
ChIP MCF-7_DMSO GSE125594.ESR1.MCF-7_DMSO 196 bp overlap
ChIP MCF-7_E2_45m GSE67295.ESR1.MCF-7_E2_45m 177 bp overlap
ChIP MCF-7_HC11 GSE102882.ESR1.MCF-7_HC11 248 bp overlap
ChIP MCF-7_ICI GSE125594.ESR1.MCF-7_ICI 195 bp overlap
ChIP MCF-7_PROG GSE68355.ESR1.MCF-7_PROG 262 bp overlap
ChIP MCF-7_R5020 GSE68355.ESR1.MCF-7_R5020 316 bp overlap
ChIP MCF-7_SIGATA_E2 GSE40129.ESR1.MCF-7_SIGATA_E2 194 bp overlap
ChIP MCF-7_shFbxo GSE119702.ESR1.MCF-7_shFbxo 157 bp overlap
ChIP MCF-7_shFbxo_E2 GSE119702.ESR1.MCF-7_shFbxo_E2 157 bp overlap
ChIP MDA-MB-134-VI_ESTROGEN GSE51022.ESR1.MDA-MB-134-VI_ESTROGEN 514 bp overlap
ChIP T-47D_Y537S_E2 GSE148277.ESR1.T-47D_Y537S_E2 346 bp overlap
ChIP breast_tumor_Male_17 GSE104399.ESR1.breast_tumor_Male_17 182 bp overlap
ChIP pleural-effusion GSE86538.ESR1.pleural-effusion 190 bp overlap
ESRRG 1 dataset
ChIP cardiomyocyte GSE113760.ESRRG.cardiomyocyte 393 bp overlap
EZH2 1 dataset
ChIP DND41 ENCSR000ASW.EZH2.DND41 422 bp overlap
FLI1 1 dataset
ChIP A-673_D11 GSE129155.FLI1.A-673_D11 227 bp overlap
FOXA1 2 datasets
ChIP breast_tumor_Female_1 GSE104399.FOXA1.breast_tumor_Female_1 146 bp overlap
ChIP breast_tumor_Female_1 GSE104399.FOXA1.breast_tumor_Female_1 90 bp overlap
GATA1 6 datasets
ChIP CD34_Day7_30min GSE104676.GATA1.CD34_Day7_30min 94 bp overlap
ChIP CD34_Day9_30min GSE104676.GATA1.CD34_Day9_30min 186 bp overlap
ChIP CD34_ERYTH_BMP GSE29194.GATA1.CD34_ERYTH_BMP 160 bp overlap
ChIP HUDEP-2_30min GSE104676.GATA1.HUDEP-2_30min 176 bp overlap
ChIP erythroblast ENCFF867JAR 553 bp overlap
ChIP erythroblast ENCSR000EXP.GATA1.erythroblast 498 bp overlap
GATA2 5 datasets
ChIP ESF GSE108408.GATA2.ESF 185 bp overlap
ChIP SH-SY5Y ENCFF485YIB 337 bp overlap
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 351 bp overlap
ChIP SK-N-SH ENCFF764OZD 417 bp overlap
ChIP SK-N-SH ENCSR706VOO.GATA2.SK-N-SH 186 bp overlap
GATA3 1 dataset
ChIP breast_tumor_Male_21 GSE104399.GATA3.breast_tumor_Male_21 63 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 514 bp overlap
ChIP DE DE-GATA4-2 582 bp overlap
ChIP foregut GSE117136.GATA4.foregut 568 bp overlap
GATA6 12 datasets
ChIP DE DE-GATA6-1 423 bp overlap
ChIP DE DE-GATA6-2 555 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 299 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 464 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 377 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 584 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 483 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 567 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 481 bp overlap
ChIP foregut GSE117136.GATA6.foregut 464 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 484 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 377 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 467 bp overlap
HAND2 1 dataset
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 390 bp overlap
HDAC2 2 datasets
ChIP K-562 ENCSR893WSB.HDAC2.K-562 54 bp overlap
ChIP RH4_DMSO-6H GSE116344.HDAC2.RH4_DMSO-6H 205 bp overlap
IRF1 1 dataset
ChIP K-562_EPZ GSE129380.IRF1.K-562_EPZ 128 bp overlap
JARID2 1 dataset
ChIP MRC-5_IPS25_CTR GSE48515.JARID2.MRC-5_IPS25_CTR 195 bp overlap
KDM1A 1 dataset
ChIP pancreatic-progenitor_GT GSE104840.KDM1A.pancreatic-progenitor_GT 60 bp overlap
KLF17 1 dataset
ChIP HEK293 ENCSR065WUF.KLF17.HEK293 415 bp overlap
KLF4 2 datasets
ChIP BJ_INDUCED GSE36570.KLF4.BJ_INDUCED 170 bp overlap
ChIP HAP1 GSE130417.KLF4.HAP1 293 bp overlap
KMT2A 2 datasets
ChIP Hep-G2 ENCSR692GFR.KMT2A.Hep-G2 180 bp overlap
ChIP RCH-ACV GSE83671.KMT2A.RCH-ACV 251 bp overlap
KMT2D 1 dataset
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.KMT2D.BIN-67_lentivirus-SMARCA4 293 bp overlap
MYCN 1 dataset
ChIP COG-N-415 GSE138295.MYCN.COG-N-415 257 bp overlap
NEUROG2 1 dataset
ChIP MRC-5_NFD_02DPT GSE75910.NEUROG2.MRC-5_NFD_02DPT 174 bp overlap
NFIA 1 dataset
ChIP HepG2 ENCFF815HWK 364 bp overlap
NR2F2 1 dataset
ChIP liver ENCSR168SMX.NR2F2.liver 277 bp overlap
NRIP1 1 dataset
ChIP MCF-7_E2 ERP005838.NRIP1.MCF-7_E2 133 bp overlap
PITX3 1 dataset
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 475 bp overlap
POU4F2 1 dataset
ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 148 bp overlap
POU5F1 1 dataset
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 584 bp overlap
PRDM15 1 dataset
ChIP WTC11 ENCFF108TMF 131 bp overlap
RAD21 1 dataset
ChIP HAP1 GSE152721.RAD21.HAP1 192 bp overlap
RBBP4 1 dataset
ChIP SCMC GSE155861.RBBP4.SCMC 61 bp overlap
RBBP5 2 datasets
ChIP H1 ENCFF905HFL 342 bp overlap
ChIP WA01 ENCSR000AQC.RBBP5.WA01 256 bp overlap
RBPJ 1 dataset
ChIP GSC8-11_dasatinib GSE74557.RBPJ.GSC8-11_dasatinib 219 bp overlap
RNF2 1 dataset
ChIP WA09 GSE105028.RNF2.WA09 211 bp overlap
SALL3 1 dataset
ChIP hiPSC GSE104863.SALL3.hiPSC 216 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 516 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 315 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 273 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 452 bp overlap
SMARCA4 6 datasets
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4 499 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-K785R 584 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-T910M 584 bp overlap
ChIP HS-SY-2_HA-tagged GSE108926.SMARCA4.HS-SY-2_HA-tagged 340 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 504 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 325 bp overlap
SMARCC1 3 datasets
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.SMARCC1.BIN-67_lentivirus-SMARCA4-K785R 511 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCC1.BIN-67_lentivirus-SMARCA4-T910M 361 bp overlap
ChIP SK-N-MC GSE94275.SMARCC1.SK-N-MC 171 bp overlap
SMC1 1 dataset
ChIP HCAEC GSE101921.SMC1.HCAEC 259 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 334 bp overlap
SOX2 2 datasets
ChIP HNSC GSE69479.SOX2.HNSC 455 bp overlap
ChIP RENVM GSE49404.SOX2.RENVM 229 bp overlap
SOX21 1 dataset
ChIP neuroepithelilal-cells GSE110505.SOX21.neuroepithelilal-cells 584 bp overlap
SP1 1 dataset
ChIP H1 ENCFF263FUH 138 bp overlap
SS18 3 datasets
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SS18.BIN-67_lentivirus-SMARCA4 394 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.SS18.BIN-67_lentivirus-SMARCA4-K785R 541 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SS18.BIN-67_lentivirus-SMARCA4-T910M 302 bp overlap
STAG2 1 dataset
ChIP HCAEC GSE101921.STAG2.HCAEC 185 bp overlap
STAT3 1 dataset
ChIP HCC1187 GSE152203.STAT3.HCC1187 183 bp overlap
TAF1 3 datasets
ChIP H1 ENCFF478SZO 310 bp overlap
ChIP PFSK-1 ENCFF982LZL 154 bp overlap
ChIP WA01 ENCSR000BHO.TAF1.WA01 242 bp overlap
TBP 2 datasets
ChIP WA01 ENCSR000ECB.TBP.WA01 295 bp overlap
ChIP hiPSC_WTb_RNase-pos GSE128135.TBP.hiPSC_WTb_RNase-pos 321 bp overlap
TBX2 2 datasets
ChIP Kelly GSE94822.TBX2.Kelly 254 bp overlap
ChIP SK-N-BE2-C GSE94822.TBX2.SK-N-BE2-C 291 bp overlap
TEAD4 1 dataset
ChIP H1 ENCFF778PAX 135 bp overlap
TFAP2A 2 datasets
ChIP MCF-7_E2 GSE60270.TFAP2A.MCF-7_E2 131 bp overlap
ChIP WA09 GSE105081.TFAP2A.WA09 184 bp overlap
TFAP2B 1 dataset
ChIP SK-N-SH ENCFF869XXQ 298 bp overlap
TFAP2C 4 datasets
ChIP HCC1954 GSE126897.TFAP2C.HCC1954 153 bp overlap
ChIP MCF-7_ETOH GSE23852.TFAP2C.MCF-7_ETOH 178 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 584 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 584 bp overlap
TWIST1 2 datasets
ChIP BE2C GSE80151.TWIST1.BE2C 440 bp overlap
ChIP SK-N-BE2-C GSE80151.TWIST1.SK-N-BE2-C 440 bp overlap
ZBTB7A 1 dataset
ChIP HUDEP-2 GSE103445.ZBTB7A.HUDEP-2 540 bp overlap
ZMYM3 1 dataset
ChIP Hep-G2_Ab_JH39-2-2F10 GSE97661.ZMYM3.Hep-G2_Ab_JH39-2-2F10 159 bp overlap
ZNF257 1 dataset
ChIP HEK293T GSE78099.ZNF257.HEK293T 224 bp overlap
ZNF70 1 dataset
ChIP SK-N-SH ENCFF833ACX 317 bp overlap
ZNF768 1 dataset
ChIP HepG2 ENCFF388QCK 294 bp overlap