chr7 : 117,683,194 117,683,770
576 bp 92 TFs 1 linked gene
This 576 bp open chromatin element is linked to CFTR and is bound by 92 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
CFTR 5.9 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr7:117,678,194 – 117,688,770
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
92 transcription factors
Source
Cell type
ARID1A 3 datasets
ChIP RMG-I GSE120058.ARID1A.RMG-I 197 bp overlap
ChIP RMG-I GSE104545.ARID1A.RMG-I 261 bp overlap
ChIP RMG-I GSE104545.ARID1A.RMG-I 160 bp overlap
BCL3 3 datasets
ChIP A-549 ENCSR000BQH.BCL3.A-549 177 bp overlap
ChIP A549 ENCFF214WKT 259 bp overlap
ChIP A549 ENCFF214WKT 458 bp overlap
BRCA1 1 dataset
ChIP HeLa-S3 ENCFF218GPC 87 bp overlap
BRD3 1 dataset
ChIP A-549 GSE119863.BRD3.A-549 166 bp overlap
BRD4 6 datasets
ChIP HEK293_sgNT GSE129407.BRD4.HEK293_sgNT 170 bp overlap
ChIP HT29 GSE73319.BRD4.HT29 409 bp overlap
ChIP IMR-90_SENES GSE74238.BRD4.IMR-90_SENES 125 bp overlap
ChIP IMR-90_SENES GSE74238.BRD4.IMR-90_SENES 173 bp overlap
ChIP SUM159PT_KO GSE131097.BRD4.SUM159PT_KO 186 bp overlap
ChIP SUM229PE_pos_DMSO_24h GSE87418.BRD4.SUM229PE_pos_DMSO_24h 309 bp overlap
BRD9 1 dataset
ChIP MDA-MB-231_JQ1_MGSK2801 GSE116879.BRD9.MDA-MB-231_JQ1_MGSK2801 80 bp overlap
CBX1 1 dataset
ChIP Hep-G2 ENCSR819WZE.CBX1.Hep-G2 121 bp overlap
CDX2 5 datasets
ChIP Caco-2_DIFF GSE23436.CDX2.Caco-2_DIFF 221 bp overlap
ChIP Caco-2_PROLIF GSE23436.CDX2.Caco-2_PROLIF 174 bp overlap
ChIP LS180 GSE31939.CDX2.LS180 205 bp overlap
ChIP LS180_125 GSE31939.CDX2.LS180_125 454 bp overlap
ChIP adult-duodenal-cell GSE115314.CDX2.adult-duodenal-cell 282 bp overlap
CEBPB 3 datasets
ChIP A-549 ENCSR000BUB.CEBPB.A-549 225 bp overlap
ChIP HeLa-S3 ENCFF722WEG 175 bp overlap
ChIP WA01 ENCSR000EBV.CEBPB.WA01 121 bp overlap
CHD2 1 dataset
ChIP HeLa-S3 ENCSR000ECP.CHD2.HeLa-S3 155 bp overlap
CHD7 2 datasets
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 270 bp overlap
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 97 bp overlap
CREB1 2 datasets
ChIP A-549 ENCSR000BRC.CREB1.A-549 104 bp overlap
ChIP A-549 ENCSR000BRB.CREB1.A-549 172 bp overlap
CREBBP 2 datasets
ChIP LS180_125 GSE39277.CREBBP.LS180_125 100 bp overlap
ChIP MCF-7 ERP000901.CREBBP.MCF-7 159 bp overlap
CTCF 1 dataset
ChIP HeLa-S3_biotin GSE108869.CTCF.HeLa-S3_biotin 198 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF460KDD 333 bp overlap
E2F4 1 dataset
ChIP HeLa-S3 ENCFF669WYW 337 bp overlap
ELF3 2 datasets
ChIP PDAC GSE64557.ELF3.PDAC 420 bp overlap
ChIP PDAC_KOKLF5 GSE64557.ELF3.PDAC_KOKLF5 576 bp overlap
EP300 8 datasets
ChIP A-549 ENCSR000BPW.EP300.A-549 246 bp overlap
ChIP A549 ENCFF476KCM 137 bp overlap
ChIP A549 ENCFF960ZEI 413 bp overlap
ChIP HeLa-S3 ENCFF089VPQ 87 bp overlap
ChIP HeLa-S3 ENCFF245KNK 236 bp overlap
ChIP HeLa-S3 ENCSR680OFU.EP300.HeLa-S3 244 bp overlap
ChIP HeLa-S3 ENCSR000ECV.EP300.HeLa-S3 201 bp overlap
ChIP MCF-7_shCtrl GSE128445.EP300.MCF-7_shCtrl 276 bp overlap
ESR1 6 datasets
ChIP MCF-7_TamR GSE128445.ESR1.MCF-7_TamR 139 bp overlap
ChIP MCF-7_estradiol-DHT_4h GSE99626.ESR1.MCF-7_estradiol-DHT_4h 122 bp overlap
ChIP MCF-7_jc5849 GSE126004.ESR1.MCF-7_jc5849 89 bp overlap
ChIP MCF-7_jc5850 GSE126004.ESR1.MCF-7_jc5850 161 bp overlap
ChIP endometrioid-adenocarcinoma_tumor_2 GSE94031.ESR1.endometrioid-adenocarcinoma_tumor_2 163 bp overlap
ChIP primary-endometrium-cancer_E1_DSG GSE114737.ESR1.primary-endometrium-cancer_E1_DSG 576 bp overlap
ESRRA 7 datasets
ChIP BT-474 GSE81651.ESRRA.BT-474 374 bp overlap
ChIP BT-474_EGF GSE81651.ESRRA.BT-474_EGF 306 bp overlap
ChIP BT-474_HRG GSE81651.ESRRA.BT-474_HRG 376 bp overlap
ChIP MCF-7 ENCSR954WVZ.ESRRA.MCF-7 172 bp overlap
ChIP SK-BR-3 GSE81651.ESRRA.SK-BR-3 169 bp overlap
ChIP SK-BR-3_EGF GSE81651.ESRRA.SK-BR-3_EGF 205 bp overlap
ChIP SK-BR-3_HRG GSE81651.ESRRA.SK-BR-3_HRG 276 bp overlap
ESRRG 1 dataset
ChIP cardiomyocyte GSE113760.ESRRG.cardiomyocyte 195 bp overlap
FOS 2 datasets
ChIP HeLa-S3 ENCSR000EZE.FOS.HeLa-S3 111 bp overlap
ChIP MCF-7 ENCSR569XNP.FOS.MCF-7 76 bp overlap
FOSL2 4 datasets
ChIP A-549 ENCSR000BQO.FOSL2.A-549 243 bp overlap
ChIP A-549 ENCSR448TVS.FOSL2.A-549 237 bp overlap
ChIP A549 ENCFF651PDH 102 bp overlap
ChIP A549 ENCFF651PDH 302 bp overlap
FOXA1 17 datasets
ChIP A-549 ENCSR000BRD.FOXA1.A-549 289 bp overlap
ChIP A-549 ENCSR000BPX.FOXA1.A-549 265 bp overlap
ChIP CFPAC-1 GSE119930.FOXA1.CFPAC-1 197 bp overlap
ChIP CFPAC-1_FOXA1-KO GSE119930.FOXA1.CFPAC-1_FOXA1-KO 227 bp overlap
ChIP CFPAC-1_FOXA2-KO GSE119930.FOXA1.CFPAC-1_FOXA2-KO 215 bp overlap
ChIP LNCaP_ETOH24H GSE58428.FOXA1.LNCaP_ETOH24H 155 bp overlap
ChIP LS180 GSE140533.FOXA1.LS180 348 bp overlap
ChIP MCF-7_estrogen_ab2 GSE112969.FOXA1.MCF-7_estrogen_ab2 54 bp overlap
ChIP MCF-7_vehicle_ab1 GSE112969.FOXA1.MCF-7_vehicle_ab1 135 bp overlap
ChIP MCF-7_vehicle_ab2 GSE112969.FOXA1.MCF-7_vehicle_ab2 140 bp overlap
ChIP PDAC GSE64557.FOXA1.PDAC 326 bp overlap
ChIP PDAC_KOKLF5 GSE64557.FOXA1.PDAC_KOKLF5 411 bp overlap
ChIP PDAC_SHCTR GSE64557.FOXA1.PDAC_SHCTR 194 bp overlap
ChIP ZR-75-1_estrogen_ab2 GSE112969.FOXA1.ZR-75-1_estrogen_ab2 66 bp overlap
ChIP ZR-75-1_vehicle_ab2 GSE112969.FOXA1.ZR-75-1_vehicle_ab2 86 bp overlap
ChIP breast_tumor_Male_4 GSE104399.FOXA1.breast_tumor_Male_4 73 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 67 bp overlap
FOXA2 6 datasets
ChIP CFPAC-1 GSE119930.FOXA2.CFPAC-1 174 bp overlap
ChIP CFPAC-1_EV GSE119930.FOXA2.CFPAC-1_EV 253 bp overlap
ChIP CFPAC-1_HOXB8-OE GSE119930.FOXA2.CFPAC-1_HOXB8-OE 171 bp overlap
ChIP Caco-2 GSE66218.FOXA2.Caco-2 106 bp overlap
ChIP DE DE-FOXA2-1 269 bp overlap
ChIP DE DE-FOXA2-2 248 bp overlap
GATA2 1 dataset
ChIP ESF GSE108408.GATA2.ESF 132 bp overlap
GATA3 2 datasets
ChIP A-549 ENCSR000BTI.GATA3.A-549 249 bp overlap
ChIP A549 ENCFF226FVV 160 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-2 189 bp overlap
ChIP foregut GSE117136.GATA4.foregut 340 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 266 bp overlap
GATA6 4 datasets
ChIP DE_D2 S55-DE-d2-GATA6-exp2 139 bp overlap
ChIP PATU8988 GSE47535.GATA6.PATU8988 191 bp overlap
ChIP YCC-3 GSE51705.GATA6.YCC-3 270 bp overlap
ChIP foregut GSE117136.GATA6.foregut 343 bp overlap
HES2 1 dataset
ChIP A549 ENCFF842NHR 175 bp overlap
HIF1A 1 dataset
ChIP PC-3_hypoxia_siCtrl GSE106305.HIF1A.PC-3_hypoxia_siCtrl 140 bp overlap
HNF1A 1 dataset
ChIP HEE_1 GSE76376.HNF1A.HEE_1 50 bp overlap
HNF1B 1 dataset
ChIP PDAC GSE64557.HNF1B.PDAC 186 bp overlap
HNF4A 4 datasets
ChIP Caco-2_DIFF GSE23436.HNF4A.Caco-2_DIFF 166 bp overlap
ChIP GP5D GSE51234.HNF4A.GP5D 359 bp overlap
ChIP LoVo_PHASES GSE51290.HNF4A.LoVo_PHASES 250 bp overlap
ChIP liver ENCFF354NRH 146 bp overlap
HOXB13 1 dataset
ChIP prostate_P29_T GSE130408.HOXB13.prostate_P29_T 89 bp overlap
IRF1 1 dataset
ChIP PDAC GSE64557.IRF1.PDAC 209 bp overlap
JUN 4 datasets
ChIP A549 ENCFF191QZG 234 bp overlap
ChIP A549 ENCFF191QZG 451 bp overlap
ChIP A549 ENCFF846DUV 119 bp overlap
ChIP MCF-7_TamR GSE128445.JUN.MCF-7_TamR 206 bp overlap
JUNB 2 datasets
ChIP A549 ENCFF251BPG 161 bp overlap
ChIP CFPAC-1 GSE119930.JUNB.CFPAC-1 195 bp overlap
JUND 5 datasets
ChIP A-549 ENCSR000BRF.JUND.A-549 156 bp overlap
ChIP GP5D GSE51234.JUND.GP5D 185 bp overlap
ChIP GP5D_SIRAD21 GSE51234.JUND.GP5D_SIRAD21 364 bp overlap
ChIP HeLa-S3 ENCFF642OHL 95 bp overlap
ChIP HeLa-S3 ENCSR000EDH.JUND.HeLa-S3 64 bp overlap
KDM1A 1 dataset
ChIP HeLa GSE45441.KDM1A.HeLa 171 bp overlap
KLF4 1 dataset
ChIP PDAC GSE64557.KLF4.PDAC 381 bp overlap
KLF6 1 dataset
ChIP PDAC GSE64557.KLF6.PDAC 150 bp overlap
LDB1 1 dataset
ChIP HEP GSE52637.LDB1.HEP 108 bp overlap
MAX 5 datasets
ChIP A-549 ENCSR000BTJ.MAX.A-549 183 bp overlap
ChIP A549 ENCFF310XGQ 132 bp overlap
ChIP HeLa-S3 ENCFF398RFF 248 bp overlap
ChIP HeLa-S3 ENCSR000EZF.MAX.HeLa-S3 190 bp overlap
ChIP HeLa-S3 ENCSR000ECN.MAX.HeLa-S3 122 bp overlap
MED1 2 datasets
ChIP LS180 GSE39277.MED1.LS180 304 bp overlap
ChIP U-87MG GSE36354.MED1.U-87MG 108 bp overlap
MGA 2 datasets
ChIP A-549_MGA-OE GSE112188.MGA.A-549_MGA-OE 118 bp overlap
ChIP A-549_empty GSE112188.MGA.A-549_empty 191 bp overlap
MTF2 1 dataset
ChIP DU145_SH4 GSE135623.MTF2.DU145_SH4 64 bp overlap
MYC 4 datasets
ChIP A549 ENCFF722CWN 178 bp overlap
ChIP GP5D GSE51234.MYC.GP5D 518 bp overlap
ChIP HeLa-S3 ENCSR000EZD.MYC.HeLa-S3 202 bp overlap
ChIP MCF-10A ENCSR000DOS.MYC.MCF-10A 87 bp overlap
NANOG 4 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 358 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 277 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 282 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 267 bp overlap
NCOA1 1 dataset
ChIP LS180 GSE39277.NCOA1.LS180 103 bp overlap
NCOR1 1 dataset
ChIP LS180 GSE39277.NCOR1.LS180 180 bp overlap
NELFCD 1 dataset
ChIP DLD-1_NELFCD-AID GSE144786.NELFCD.DLD-1_NELFCD-AID 363 bp overlap
NELFE 2 datasets
ChIP DLD-1_NELFCD-AID GSE144786.NELFE.DLD-1_NELFCD-AID 283 bp overlap
ChIP HeLa_DOX GSE125534.NELFE.HeLa_DOX 359 bp overlap
NFE2L2 1 dataset
ChIP A-549 GSE113497.NFE2L2.A-549 359 bp overlap
NIPBL 1 dataset
ChIP GP5D GSE51234.NIPBL.GP5D 217 bp overlap
NR1H2 2 datasets
ChIP HT29_GW3965_2H GSE77039.NR1H2.HT29_GW3965_2H 102 bp overlap
ChIP HT29_GW3965_48H GSE77039.NR1H2.HT29_GW3965_48H 192 bp overlap
NR3C1 3 datasets
ChIP A-549 ENCSR000BHF.NR3C1.A-549 256 bp overlap
ChIP A-549 ENCSR000BJR.NR3C1.A-549 223 bp overlap
ChIP SUM159PT GSE152203.NR3C1.SUM159PT 234 bp overlap
NR5A2 2 datasets
ChIP A-549 ENCSR190GIW.NR5A2.A-549 274 bp overlap
ChIP A549 ENCFF834RVE 370 bp overlap
NRIP1 2 datasets
ChIP MCF-7 ERP005838.NRIP1.MCF-7 128 bp overlap
ChIP MCF-7_E2 ERP005838.NRIP1.MCF-7_E2 127 bp overlap
PBX1 2 datasets
ChIP A-549 ENCSR637RKG.PBX1.A-549 248 bp overlap
ChIP A549 ENCFF475JCE 50 bp overlap
POLR2A 2 datasets
ChIP HeLa-S3 ENCFF455YYQ 250 bp overlap
ChIP HeLa-S3 ENCFF773DNG 173 bp overlap
POU5F1 1 dataset
ChIP BJ_INDUCED GSE36570.POU5F1.BJ_INDUCED 137 bp overlap
PPARG 2 datasets
ChIP HT29_ROSIG_2H GSE77039.PPARG.HT29_ROSIG_2H 169 bp overlap
ChIP HT29_ROSIG_48H GSE77039.PPARG.HT29_ROSIG_48H 171 bp overlap
RAD21 4 datasets
ChIP A549 ENCFF264AHX 209 bp overlap
ChIP GP5D GSE51234.RAD21.GP5D 337 bp overlap
ChIP HeLa-S3 ENCFF775CHI 189 bp overlap
ChIP HeLa-S3_CTCF-s-OE GSE108869.RAD21.HeLa-S3_CTCF-s-OE 270 bp overlap
RCOR1 2 datasets
ChIP HeLa-S3 ENCFF471KYI 258 bp overlap
ChIP keratinocyte_diff GSE57702.RCOR1.keratinocyte_diff 130 bp overlap
RELA 1 dataset
ChIP Detroit-562_Poly-I GSE91018.RELA.Detroit-562_Poly-I 93 bp overlap
REST 4 datasets
ChIP A-549 ENCSR000BQP.REST.A-549 193 bp overlap
ChIP colorectal-cancer_shCDH1 GSE112555.REST.colorectal-cancer_shCDH1 126 bp overlap
ChIP colorectal-cancer_shCTRL_dissociated GSE112555.REST.colorectal-cancer_shCTRL_dissociated 266 bp overlap
ChIP colorectal-cancer_shCTRL_intact GSE112555.REST.colorectal-cancer_shCTRL_intact 373 bp overlap
RFX1 1 dataset
ChIP MCF-7 ENCSR066TET.RFX1.MCF-7 113 bp overlap
RUNX1T1 1 dataset
ChIP Kasumi-1 GSE102697.RUNX1T1.Kasumi-1 156 bp overlap
RXR 2 datasets
ChIP LS180 GSE31939.RXR.LS180 163 bp overlap
ChIP LS180_125 GSE31939.RXR.LS180_125 288 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 273 bp overlap
SMAD4 1 dataset
ChIP Caco-2 GSE112946.SMAD4.Caco-2 250 bp overlap
SMARCA4 12 datasets
ChIP A-549_AG15677 GSE132290.SMARCA4.A-549_AG15677 222 bp overlap
ChIP A-549_AG15678 GSE132290.SMARCA4.A-549_AG15678 222 bp overlap
ChIP A-549_AG15679 GSE132290.SMARCA4.A-549_AG15679 201 bp overlap
ChIP A-549_AG15684 GSE132290.SMARCA4.A-549_AG15684 88 bp overlap
ChIP A-549_AG15685 GSE132290.SMARCA4.A-549_AG15685 338 bp overlap
ChIP A-549_AG15720 GSE132290.SMARCA4.A-549_AG15720 147 bp overlap
ChIP A-549_AG15721 GSE132290.SMARCA4.A-549_AG15721 192 bp overlap
ChIP A-549_AG15722 GSE132290.SMARCA4.A-549_AG15722 201 bp overlap
ChIP A-549_AG15723 GSE132290.SMARCA4.A-549_AG15723 218 bp overlap
ChIP A-549_AG15724 GSE132290.SMARCA4.A-549_AG15724 212 bp overlap
ChIP A-549_AG15725 GSE132290.SMARCA4.A-549_AG15725 214 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 101 bp overlap
SMC3 3 datasets
ChIP A549 ENCFF079FKB 126 bp overlap
ChIP GP5D GSE51234.SMC3.GP5D 302 bp overlap
ChIP HeLa-S3 ENCFF992MML 205 bp overlap
SNAI2 1 dataset
ChIP SMS-CTR_T48 GSE137168.SNAI2.SMS-CTR_T48 170 bp overlap
SOX2 3 datasets
ChIP LK2_DNp63 GSE137459.SOX2.LK2_DNp63 274 bp overlap
ChIP LK2_GFP GSE137459.SOX2.LK2_GFP 184 bp overlap
ChIP LK2_GFP GSE137459.SOX2.LK2_GFP 333 bp overlap
SP1 1 dataset
ChIP A-549 ENCSR000BPE.SP1.A-549 316 bp overlap
STAT3 10 datasets
ChIP HCC70 GSE152203.STAT3.HCC70 145 bp overlap
ChIP HCC70_EtOH GSE85579.STAT3.HCC70_EtOH 187 bp overlap
ChIP HeLa-S3 ENCFF655DGU 87 bp overlap
ChIP MCF-7_jc5834 GSE126004.STAT3.MCF-7_jc5834 160 bp overlap
ChIP MCF-7_jc5836 GSE126004.STAT3.MCF-7_jc5836 53 bp overlap
ChIP MCF-7_jc5838 GSE126004.STAT3.MCF-7_jc5838 147 bp overlap
ChIP MCF-7_jc5840 GSE126004.STAT3.MCF-7_jc5840 230 bp overlap
ChIP MCF-7_jc5848 GSE126004.STAT3.MCF-7_jc5848 82 bp overlap
ChIP MCF10A-Er-Src_TAM GSE115597.STAT3.MCF10A-Er-Src_TAM 59 bp overlap
ChIP SUM159PT GSE152203.STAT3.SUM159PT 200 bp overlap
SUPT5H 3 datasets
ChIP DLD-1_NELFCD-AID GSE144786.SUPT5H.DLD-1_NELFCD-AID 575 bp overlap
ChIP DLD-1_NELFCD-AID_treated GSE144786.SUPT5H.DLD-1_NELFCD-AID_treated 544 bp overlap
ChIP HeLa_DOX GSE125534.SUPT5H.HeLa_DOX 128 bp overlap
TBP 1 dataset
ChIP HeLa-S3 ENCFF715NNJ 319 bp overlap
TCF12 1 dataset
ChIP A-549 ENCSR000BQQ.TCF12.A-549 343 bp overlap
TCF4 2 datasets
ChIP LS180 GSE31939.TCF4.LS180 87 bp overlap
ChIP LS180_125 GSE31939.TCF4.LS180_125 110 bp overlap
TEAD4 1 dataset
ChIP PC-9_1DF GSE131687.TEAD4.PC-9_1DF 153 bp overlap
TFAP4 1 dataset
ChIP DLD-1 GSE46935.TFAP4.DLD-1 144 bp overlap
TP63 1 dataset
ChIP BxPC-3 GSE115461.TP63.BxPC-3 75 bp overlap
YY1AP1 2 datasets
ChIP PC-9_1DF GSE131687.YY1AP1.PC-9_1DF 146 bp overlap
ChIP PC-9_2DF GSE131687.YY1AP1.PC-9_2DF 88 bp overlap
ZNF143 2 datasets
ChIP MCF-7 GSE76454.ZNF143.MCF-7 129 bp overlap
ChIP MCF-7_E2 GSE76454.ZNF143.MCF-7_E2 94 bp overlap
ZNF467 1 dataset
ChIP HEK293 GSE76494.ZNF467.HEK293 233 bp overlap