chr6 : 143,672,889 – 143,673,175
286 bp 90 TFs 1 linked gene
This 286 bp open chromatin element is linked to PHACTR2 and is bound by 90 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
PHACTR2 4.8 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:143,667,889 – 143,678,175
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
90 transcription factors
Source
Cell type
ARID1A 2 datasets
ChIP 12Z GSE129781.ARID1A.12Z 189 bp overlap
ChIP endometrial-epithelial-cells GSE106660.ARID1A.endometrial-epithelial-cells 176 bp overlap
ARID5B 1 dataset
ChIP HepG2 ENCFF964FWK 286 bp overlap
ARNT 1 dataset
ChIP A-549 GSE85352.ARNT.A-549 178 bp overlap
ATF3 6 datasets
ChIP HCT-116_CAMP GSE74355.ATF3.HCT-116_CAMP 182 bp overlap
ChIP HCT-116_DMSO GSE74355.ATF3.HCT-116_DMSO 99 bp overlap
ChIP Hep-G2 ENCSR402ZCY.ATF3.Hep-G2 181 bp overlap
ChIP HepG2 ENCFF832LTU 273 bp overlap
ChIP K-562 ENCSR028UIU.ATF3.K-562 286 bp overlap
ChIP K562 ENCFF604FPV 256 bp overlap
BRD2 1 dataset
ChIP MDA-MB-231_BAZ2BsiRNA GSE116879.BRD2.MDA-MB-231_BAZ2BsiRNA 141 bp overlap
BRD3 1 dataset
ChIP H-1_DE GSE126661.BRD3.H-1_DE 172 bp overlap
BRD4 13 datasets
ChIP HCC1806_100nMtrametinib_24h GSE87418.BRD4.HCC1806_100nMtrametinib_24h 122 bp overlap
ChIP MCF-7_ARID1A-KO GSE123284.BRD4.MCF-7_ARID1A-KO 138 bp overlap
ChIP MCF-7_parental GSE123284.BRD4.MCF-7_parental 129 bp overlap
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.BRD4.MCF-7_parental_4-hydroxytamoxifen 164 bp overlap
ChIP MDA-MB-231_DMSO GSE116879.BRD4.MDA-MB-231_DMSO 173 bp overlap
ChIP MDA-MB-231_DMSO_rDNA GSE116879.BRD4.MDA-MB-231_DMSO_rDNA 173 bp overlap
ChIP MDA-MB-231_JQ1_MGSK2801 GSE116879.BRD4.MDA-MB-231_JQ1_MGSK2801 192 bp overlap
ChIP MDA-MB-231_JQ1_MGSK2801_rDNA GSE116879.BRD4.MDA-MB-231_JQ1_MGSK2801_rDNA 192 bp overlap
ChIP MDA-MB-231_MGSK2801 GSE116879.BRD4.MDA-MB-231_MGSK2801 164 bp overlap
ChIP MDA-MB-231_MGSK2801_rDNA GSE116879.BRD4.MDA-MB-231_MGSK2801_rDNA 164 bp overlap
ChIP SUM159PT_DMSO_48h GSE87418.BRD4.SUM159PT_DMSO_48h 227 bp overlap
ChIP SUM159PT_Dox_48h GSE87418.BRD4.SUM159PT_Dox_48h 208 bp overlap
ChIP SUM159PT_shMYC_DMSO_48h GSE87418.BRD4.SUM159PT_shMYC_DMSO_48h 184 bp overlap
BRD9 2 datasets
ChIP MDA-MB-231_DMSO GSE116879.BRD9.MDA-MB-231_DMSO 163 bp overlap
ChIP MDA-MB-231_MGSK2801 GSE116879.BRD9.MDA-MB-231_MGSK2801 196 bp overlap
CBFA2T3 1 dataset
ChIP K562 ENCFF673OEZ 286 bp overlap
CBX3 2 datasets
ChIP HCT-116 ENCSR000BUH.CBX3.HCT-116 203 bp overlap
ChIP HCT116 ENCFF947BOL 286 bp overlap
CDKN1B 1 dataset
ChIP MDA-MB-231_p27CK-DD GSE112444.CDKN1B.MDA-MB-231_p27CK-DD 286 bp overlap
CEBPB 1 dataset
ChIP Ishikawa ENCFF010USJ 259 bp overlap
CREBBP 1 dataset
ChIP keratinocyte GSE140991.CREBBP.keratinocyte 166 bp overlap
E2F1 1 dataset
ChIP MDA-MB-231 GSE95303.E2F1.MDA-MB-231 229 bp overlap
EGR1 11 datasets
Motif DE_12h DE_12h-EGR1_MA0162.5 10 bp overlap
ChIP HCT-116 ENCSR000BRZ.EGR1.HCT-116 256 bp overlap
ChIP HCT116 ENCFF456NPQ 286 bp overlap
ChIP Hep-G2 ENCSR026GSW.EGR1.Hep-G2 252 bp overlap
ChIP HepG2 ENCFF674RQO 286 bp overlap
ChIP Ishikawa ENCFF550FKT 210 bp overlap
ChIP K-562 ENCSR024CNP.EGR1.K-562 286 bp overlap
ChIP K-562 ENCSR211LTF.EGR1.K-562 233 bp overlap
ChIP K-562 ENCSR000BNE.EGR1.K-562 113 bp overlap
ChIP K562 ENCFF113OPQ 286 bp overlap
ChIP K562 ENCFF895KGN 194 bp overlap
EGR2 1 dataset
ChIP HEK293 ENCFF336LFH 286 bp overlap
EP300 2 datasets
ChIP Ishikawa ENCFF364ZWT 286 bp overlap
ChIP Ishikawa ENCSR000BUE.EP300.Ishikawa 249 bp overlap
ESR1 2 datasets
ChIP Ishikawa_E2_D538G GSE132426.ESR1.Ishikawa_E2_D538G 220 bp overlap
ChIP Ishikawa_E2_D538G_clone2 GSE132426.ESR1.Ishikawa_E2_D538G_clone2 271 bp overlap
FOS 8 datasets
ChIP CFPAC-1 GSE119930.FOS.CFPAC-1 135 bp overlap
ChIP K-562 ENCSR000DKB.FOS.K-562 189 bp overlap
ChIP MCF-10A ENCSR000DON.FOS.MCF-10A 140 bp overlap
ChIP MCF-7 ENCFF282FWZ 286 bp overlap
ChIP MCF-7 ENCSR569XNP.FOS.MCF-7 286 bp overlap
ChIP endothelial cell of umbilical vein ENCFF415XBG 286 bp overlap
ChIP endothelial_umbilical-vein ENCSR000EVU.FOS.endothelial_umbilical-vein 266 bp overlap
ChIP leiomyoma_PT1063 GSE128230.FOS.leiomyoma_PT1063 65 bp overlap
FOSL1 7 datasets
ChIP 143B GSE74230.FOSL1.143B 195 bp overlap
ChIP BT-549 GSE46166.FOSL1.BT-549 266 bp overlap
ChIP BT-549 GSE112961.FOSL1.BT-549 249 bp overlap
ChIP HCT-116 ENCSR000BTE.FOSL1.HCT-116 240 bp overlap
ChIP HCT116 ENCFF540ZXN 286 bp overlap
ChIP K-562 ENCSR000BMV.FOSL1.K-562 154 bp overlap
ChIP MDA-MB-231 GSE95303.FOSL1.MDA-MB-231 163 bp overlap
FOSL2 9 datasets
ChIP A-549 ENCSR448TVS.FOSL2.A-549 252 bp overlap
ChIP A549 ENCFF195CES 286 bp overlap
ChIP Hep-G2 ENCSR000BHP.FOSL2.Hep-G2 142 bp overlap
ChIP HepG2 ENCFF548CXY 252 bp overlap
ChIP HepG2 ENCFF796NIA 257 bp overlap
ChIP LPS141 GSE111253.FOSL2.LPS141 244 bp overlap
ChIP MCF-7 ENCFF716UWP 270 bp overlap
ChIP MCF-7 ENCSR000BUI.FOSL2.MCF-7 133 bp overlap
ChIP SK-N-SH ENCSR000BVB.FOSL2.SK-N-SH 136 bp overlap
GLIS1 2 datasets
ChIP HEK293 ENCFF299RSE 227 bp overlap
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 274 bp overlap
GLIS2 1 dataset
ChIP HEK293 ENCFF446EIF 286 bp overlap
HDAC2 1 dataset
ChIP PC-3 GSE147455.HDAC2.PC-3 105 bp overlap
HNF4A 1 dataset
ChIP KATO-III GSE114018.HNF4A.KATO-III 158 bp overlap
IKZF1 3 datasets
ChIP K-562 ENCSR395HWC.IKZF1.K-562 221 bp overlap
ChIP K562 ENCFF348IBL 164 bp overlap
ChIP K562 ENCFF771OHZ 142 bp overlap
INSM2 1 dataset
ChIP HEK293 ENCFF008ZWC 286 bp overlap
IRF2 1 dataset
ChIP keratinocyte_DOX GSE135677.IRF2.keratinocyte_DOX 188 bp overlap
JUN 15 datasets
ChIP BT-549 GSE71976.JUN.BT-549 147 bp overlap
ChIP BT-549_TNF GSE71976.JUN.BT-549_TNF 148 bp overlap
ChIP DE_D1 S08-DE-d1-JUN-exp1 286 bp overlap
ChIP DE_D1 S13-DE-d1-JUN-exp1 230 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 286 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 286 bp overlap
ChIP ESC S24-ESC-d0-JUN-exp1 286 bp overlap
ChIP ESC S34-ESC-d0-JUN-exp2 286 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 286 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 286 bp overlap
ChIP K-562 ENCSR000EFS.JUN.K-562 132 bp overlap
ChIP MCF-7_TamR GSE128445.JUN.MCF-7_TamR 243 bp overlap
ChIP MDA-BoM-1833 GSE112444.JUN.MDA-BoM-1833 272 bp overlap
ChIP MDA-MB-231 GSE112444.JUN.MDA-MB-231 286 bp overlap
ChIP endothelial_umbilical-vein ENCSR000EFA.JUN.endothelial_umbilical-vein 205 bp overlap
JUNB 4 datasets
ChIP CFPAC-1 GSE119930.JUNB.CFPAC-1 165 bp overlap
ChIP HAEC GSE89970.JUNB.HAEC 190 bp overlap
ChIP K-562 ENCSR000DJY.JUNB.K-562 139 bp overlap
ChIP MCF10A-Er-Src_EtOH GSE115597.JUNB.MCF10A-Er-Src_EtOH 123 bp overlap
JUND 10 datasets
ChIP HCT-116 ENCSR000BSA.JUND.HCT-116 243 bp overlap
ChIP HCT116 ENCFF748ZQX 286 bp overlap
ChIP HeLa-S3 ENCSR000EDH.JUND.HeLa-S3 242 bp overlap
ChIP Hep-G2 ENCSR000BGK.JUND.Hep-G2 170 bp overlap
ChIP HepG2 ENCFF172HFZ 249 bp overlap
ChIP HepG2 ENCFF869OPW 269 bp overlap
ChIP K-562 ENCSR000EGN.JUND.K-562 237 bp overlap
ChIP K562 ENCFF830LVJ 273 bp overlap
ChIP WA01 ENCSR000EBZ.JUND.WA01 187 bp overlap
ChIP WA01 ENCSR000BKP.JUND.WA01 98 bp overlap
KLF1 2 datasets
ChIP HEK293 ENCFF159QSW 286 bp overlap
ChIP HEK293 ENCSR859BMR.KLF1.HEK293 286 bp overlap
KLF11 1 dataset
Motif DE_12h DE_12h-KLF11_MA1512.2 10 bp overlap
KLF17 2 datasets
ChIP HEK293 ENCFF658MHR 286 bp overlap
ChIP HEK293 ENCSR065WUF.KLF17.HEK293 234 bp overlap
KLF3 1 dataset
ChIP keratinocyte GSE140991.KLF3.keratinocyte 52 bp overlap
KLF4 1 dataset
ChIP BJ_INDUCED GSE36570.KLF4.BJ_INDUCED 155 bp overlap
KLF5 1 dataset
ChIP ESO-26 GSE132680.KLF5.ESO-26 201 bp overlap
KLF6 2 datasets
Motif DE_12h DE_12h-KLF6_MA1517.2 9 bp overlap
ChIP PDAC GSE64557.KLF6.PDAC 203 bp overlap
KLF7 1 dataset
ChIP HEK293 ENCFF599UKL 286 bp overlap
KLF9 3 datasets
Motif DE_12h DE_12h-KLF9_MA1107.3 11 bp overlap
ChIP HEK293 ENCFF588INF 286 bp overlap
ChIP HEK293 ENCSR076EZB.KLF9.HEK293 219 bp overlap
LCORL 1 dataset
ChIP HepG2 ENCFF017FTI 286 bp overlap
MAML1 1 dataset
ChIP SCC_4h GSE156486.MAML1.SCC_4h 184 bp overlap
MAX 4 datasets
ChIP HCT-116 ENCSR000BSH.MAX.HCT-116 132 bp overlap
ChIP HeLa-S3 ENCSR000EZF.MAX.HeLa-S3 118 bp overlap
ChIP Ishikawa ENCFF064TDQ 286 bp overlap
ChIP Ishikawa ENCSR000BTY.MAX.Ishikawa 118 bp overlap
MED1 1 dataset
ChIP RH4 GSE83726.MED1.RH4 160 bp overlap
MGA 1 dataset
ChIP A-549_MGA-OE GSE112188.MGA.A-549_MGA-OE 140 bp overlap
MYC 3 datasets
ChIP BJ_INDUCED GSE36570.MYC.BJ_INDUCED 145 bp overlap
ChIP DLD-1_MYC-activated GSE117240.MYC.DLD-1_MYC-activated 145 bp overlap
ChIP MCF-10A ENCSR000DOS.MYC.MCF-10A 108 bp overlap
NIPBL 2 datasets
ChIP HCT-116_RAD21-mAC GSE104888.NIPBL.HCT-116_RAD21-mAC 192 bp overlap
ChIP HCT-116_RAD21-mAC_500uM_auxin GSE104888.NIPBL.HCT-116_RAD21-mAC_500uM_auxin 230 bp overlap
NR3C1 7 datasets
ChIP BEAS-2B_DEX GSE125623.NR3C1.BEAS-2B_DEX 235 bp overlap
ChIP BEAS-2B_DEX_IA1 GSE125623.NR3C1.BEAS-2B_DEX_IA1 286 bp overlap
ChIP BEAS-2B_TNF-DEX_IA1 GSE125623.NR3C1.BEAS-2B_TNF-DEX_IA1 269 bp overlap
ChIP BEAS-2B_shNR3C1_TNF_IA1 GSE125623.NR3C1.BEAS-2B_shNR3C1_TNF_IA1 271 bp overlap
ChIP BEAS-2B_shNR3C1_Veh_IA1 GSE125623.NR3C1.BEAS-2B_shNR3C1_Veh_IA1 210 bp overlap
ChIP Ishikawa ENCSR000BJC.NR3C1.Ishikawa 129 bp overlap
ChIP U2OS_GLUCC ERP007081.NR3C1.U2OS_GLUCC 63 bp overlap
OTX2 1 dataset
ChIP retina_pigment GSE60024.OTX2.retina_pigment 210 bp overlap
PATZ1 2 datasets
ChIP HEK293 ENCFF016MNJ 286 bp overlap
ChIP HEK293 ENCSR966ULI.PATZ1.HEK293 221 bp overlap
POLR2A 2 datasets
ChIP HCT116 ENCFF508RDJ 286 bp overlap
ChIP stomach ENCFF820WZN 274 bp overlap
POU5F1 1 dataset
ChIP BJ_INDUCED GSE36570.POU5F1.BJ_INDUCED 164 bp overlap
RBPJ 1 dataset
ChIP SCC_4h GSE156486.RBPJ.SCC_4h 154 bp overlap
RELA 6 datasets
ChIP Detroit-562_LPS GSE91018.RELA.Detroit-562_LPS 286 bp overlap
ChIP Detroit-562_Pam2CSK4 GSE91018.RELA.Detroit-562_Pam2CSK4 253 bp overlap
ChIP Detroit-562_Poly-I GSE91018.RELA.Detroit-562_Poly-I 286 bp overlap
ChIP Detroit-562_TNFa GSE91018.RELA.Detroit-562_TNFa 286 bp overlap
ChIP Detroit-562_tri-DAP GSE91018.RELA.Detroit-562_tri-DAP 214 bp overlap
ChIP FaDu_LPS GSE132018.RELA.FaDu_LPS 280 bp overlap
RXRA 1 dataset
ChIP HepG2 ENCFF763IEA 286 bp overlap
SETDB1 2 datasets
ChIP HEK293 ENCSR348AGV.SETDB1.HEK293 286 bp overlap
ChIP U2OS ENCSR000EYD.SETDB1.U2OS 286 bp overlap
SMAD3 3 datasets
ChIP HCC1954 GSE104760.SMAD3.HCC1954 227 bp overlap
ChIP NCI-H441 GSE51509.SMAD3.NCI-H441 239 bp overlap
ChIP NCI-H441_SIITTF1 GSE51509.SMAD3.NCI-H441_SIITTF1 170 bp overlap
SMARCA4 14 datasets
ChIP A-549_AG15677 GSE132290.SMARCA4.A-549_AG15677 133 bp overlap
ChIP A-549_AG15678 GSE132290.SMARCA4.A-549_AG15678 121 bp overlap
ChIP A-549_AG15720 GSE132290.SMARCA4.A-549_AG15720 85 bp overlap
ChIP A-549_AG15721 GSE132290.SMARCA4.A-549_AG15721 101 bp overlap
ChIP A-549_AG15722 GSE132290.SMARCA4.A-549_AG15722 107 bp overlap
ChIP A-549_AG15723 GSE132290.SMARCA4.A-549_AG15723 155 bp overlap
ChIP A-549_AG15724 GSE132290.SMARCA4.A-549_AG15724 175 bp overlap
ChIP A-549_AG15725 GSE132290.SMARCA4.A-549_AG15725 103 bp overlap
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4 165 bp overlap
ChIP TTC-1240 GSE124903.SMARCA4.TTC-1240 223 bp overlap
ChIP TTC-1240_R377H GSE124903.SMARCA4.TTC-1240_R377H 209 bp overlap
ChIP TTC-1240_SMARCB1-FL GSE124903.SMARCA4.TTC-1240_SMARCB1-FL 182 bp overlap
ChIP TTC-1240_delC GSE124903.SMARCA4.TTC-1240_delC 268 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 231 bp overlap
SMARCB1 1 dataset
ChIP hiPSC GSE124903.SMARCB1.hiPSC 197 bp overlap
SMARCC1 4 datasets
ChIP TTC-1240_R377H GSE124903.SMARCC1.TTC-1240_R377H 207 bp overlap
ChIP TTC-1240_SMARCB1-FL GSE124903.SMARCC1.TTC-1240_SMARCB1-FL 195 bp overlap
ChIP TTC-1240_delC GSE124903.SMARCC1.TTC-1240_delC 213 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 157 bp overlap
SMC1A 1 dataset
ChIP primary-epidermal-keratinocyte GSE85526.SMC1A.primary-epidermal-keratinocyte 168 bp overlap
SOX13 1 dataset
ChIP HepG2 ENCFF062VSQ 286 bp overlap
SP1 1 dataset
ChIP HCT-116 ENCSR000BSF.SP1.HCT-116 228 bp overlap
SP7 2 datasets
ChIP HEK293 ENCFF733RBE 286 bp overlap
ChIP HEK293 ENCSR468IJT.SP7.HEK293 286 bp overlap
SP8 1 dataset
Motif DE_12h DE_12h-SP8_MA0747.2 11 bp overlap
SREBF1 1 dataset
ChIP MCF-7 ENCFF254QOR 282 bp overlap
STAG1 1 dataset
ChIP MCF-7_E2_SHCTCF ERP000209.STAG1.MCF-7_E2_SHCTCF 92 bp overlap
SUPT5H 2 datasets
ChIP DLD-1_NELFCD-AID GSE144786.SUPT5H.DLD-1_NELFCD-AID 152 bp overlap
ChIP HCT-116_pThr806 GSE138548.SUPT5H.HCT-116_pThr806 146 bp overlap
TBL1X 1 dataset
ChIP HEK293T GSE35197.TBL1X.HEK293T 187 bp overlap
TCF12 2 datasets
ChIP Ishikawa ENCFF467DDW 286 bp overlap
ChIP Ishikawa ENCSR000BUV.TCF12.Ishikawa 262 bp overlap
TCF7L2 1 dataset
ChIP HCT-116 ENCSR000EUV.TCF7L2.HCT-116 146 bp overlap
TEAD4 2 datasets
ChIP Ishikawa ENCFF772OTG 106 bp overlap
ChIP Ishikawa ENCSR000BSW.TEAD4.Ishikawa 214 bp overlap
TFAP4 3 datasets
ChIP DLD-1 GSE46935.TFAP4.DLD-1 262 bp overlap
ChIP Hep-G2 ENCSR103SZL.TFAP4.Hep-G2 160 bp overlap
ChIP HepG2 ENCFF932XOY 137 bp overlap
THRB 1 dataset
ChIP HepG2 ENCFF476INC 286 bp overlap
TP53 1 dataset
ChIP MDA-MB-231 GSE95303.TP53.MDA-MB-231 185 bp overlap
YY1 1 dataset
ChIP HCT-116 ENCSR000BNX.YY1.HCT-116 104 bp overlap
ZBTB17 1 dataset
ChIP HEK293 ENCFF865LIO 286 bp overlap
ZBTB20 1 dataset
ChIP HEK293 ENCSR460MBI.ZBTB20.HEK293 205 bp overlap
ZBTB6 1 dataset
ChIP HEK293 GSE76494.ZBTB6.HEK293 152 bp overlap
ZFHX2 1 dataset
ChIP HEK293 ENCFF167TUA 286 bp overlap
ZNF121 1 dataset
ChIP WTC11 ENCFF291API 54 bp overlap
ZNF143 2 datasets
Motif DE_12h DE_12h-ZNF143_MA0088.2 16 bp overlap
ChIP FLP76_T4 GSE39263.ZNF143.FLP76_T4 147 bp overlap
ZNF184 1 dataset
ChIP HEK293 ENCSR020UPN.ZNF184.HEK293 224 bp overlap
ZNF189 2 datasets
ChIP HEK293 ENCFF638TIB 286 bp overlap
ChIP HEK293 ENCSR163RYW.ZNF189.HEK293 285 bp overlap
ZNF280D 1 dataset
ChIP HEK293 ENCFF420AXB 225 bp overlap
ZNF554 1 dataset
ChIP HEK293 GSE76494.ZNF554.HEK293 160 bp overlap
ZNF600 1 dataset
ChIP HEK293 ENCFF785JSX 286 bp overlap
ZNF76 1 dataset
Motif DE_12h DE_12h-ZNF76_MA1716.2 17 bp overlap
ZSCAN21 3 datasets
ChIP HEK293 ENCFF582WUP 286 bp overlap
ChIP HEK293 ENCFF582WUP 153 bp overlap
ChIP HEK293 ENCSR253CKN.ZSCAN21.HEK293 154 bp overlap
ZSCAN5A 1 dataset
ChIP HEK293 ENCFF610EME 226 bp overlap
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