chr6 : 141,153,579 141,153,870
291 bp 89 TFs 0 linked genes
This 291 bp open chromatin element has no linked target genes and is bound by 89 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:141,148,579 – 141,158,870
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
89 transcription factors
Source
Cell type
AR 5 datasets
ChIP LNCaP GSE110655.AR.LNCaP 86 bp overlap
ChIP LNCaP-clone-FGC_DHT-DMSO GSE118247.AR.LNCaP-clone-FGC_DHT-DMSO 145 bp overlap
ChIP LNCaP_r1881 GSE94682.AR.LNCaP_r1881 74 bp overlap
ChIP LNCaP_sgCHD1 GSE117430.AR.LNCaP_sgCHD1 133 bp overlap
ChIP LNCaP_sgCtrl GSE117430.AR.LNCaP_sgCtrl 119 bp overlap
ARID1A 3 datasets
ChIP HAP1 GSE108387.ARID1A.HAP1 188 bp overlap
ChIP MCF-7_4-hydroxytamoxifen GSE123284.ARID1A.MCF-7_4-hydroxytamoxifen 109 bp overlap
ChIP MCF-7_Fulvestrant GSE123284.ARID1A.MCF-7_Fulvestrant 85 bp overlap
ARID3A 2 datasets
ChIP GM12878 ENCFF006WWZ 206 bp overlap
ChIP GM12878 ENCSR778UBR.ARID3A.GM12878 149 bp overlap
ASH2L 2 datasets
ChIP H1 ENCFF399KAM 270 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 199 bp overlap
ATF2 2 datasets
ChIP GM12878 ENCFF521LQJ 291 bp overlap
ChIP WA01 ENCSR000BQU.ATF2.WA01 162 bp overlap
BCL11A 3 datasets
ChIP GM12878 ENCFF717YPR 218 bp overlap
ChIP GM12878 ENCSR000BHA.BCL11A.GM12878 206 bp overlap
ChIP WA01 ENCSR000BIP.BCL11A.WA01 133 bp overlap
BCL6 1 dataset
ChIP CD4 GSE59933.BCL6.CD4 191 bp overlap
BMI1 1 dataset
ChIP GM12878 ENCSR469WII.BMI1.GM12878 200 bp overlap
BRD2 1 dataset
ChIP MM1-S GSE43743.BRD2.MM1-S 75 bp overlap
BRD4 13 datasets
ChIP GM15850_DMSO GSE99402.BRD4.GM15850_DMSO 284 bp overlap
ChIP GM15850_Syn-TEF1 GSE99402.BRD4.GM15850_Syn-TEF1 291 bp overlap
ChIP LNCaP-C4-2_F133V GSE88871.BRD4.LNCaP-C4-2_F133V 96 bp overlap
ChIP MM1-S GSE43743.BRD4.MM1-S 291 bp overlap
ChIP MM1-S GSE45984.BRD4.MM1-S 291 bp overlap
ChIP MM1-S_DMSO GSE42161.BRD4.MM1-S_DMSO 291 bp overlap
ChIP MM1-S_JQ1_150NM GSE49224.BRD4.MM1-S_JQ1_150NM 291 bp overlap
ChIP MM1-S_JQ1_500NM GSE42355.BRD4.MM1-S_JQ1_500NM 291 bp overlap
ChIP MM1-S_JQ1_50NM GSE42355.BRD4.MM1-S_JQ1_50NM 291 bp overlap
ChIP MM1-S_JQ1_5NM GSE42355.BRD4.MM1-S_JQ1_5NM 291 bp overlap
ChIP MM1-S_JQ1_5UM GSE42355.BRD4.MM1-S_JQ1_5UM 291 bp overlap
ChIP PC-3_GDC-R_SAHA GSE137207.BRD4.PC-3_GDC-R_SAHA 54 bp overlap
ChIP hESC GSE33281.BRD4.hESC 64 bp overlap
CDK8 1 dataset
ChIP MM1-S GSE43743.CDK8.MM1-S 218 bp overlap
CDK9 4 datasets
ChIP MM1-S_DMSO GSE42161.CDK9.MM1-S_DMSO 227 bp overlap
ChIP MM1-S_JQ1_5000NM GSE49224.CDK9.MM1-S_JQ1_5000NM 291 bp overlap
ChIP MM1-S_JQ1_500NM GSE42355.CDK9.MM1-S_JQ1_500NM 234 bp overlap
ChIP MM1-S_JQ1_50NM GSE49224.CDK9.MM1-S_JQ1_50NM 181 bp overlap
CHD2 1 dataset
ChIP H1 ENCFF991MKH 291 bp overlap
COMMD3-BMI1,BMI1 2 datasets
ChIP GM12878 ENCFF249AMT 291 bp overlap
ChIP GM12878 ENCFF249AMT 135 bp overlap
CREB1 2 datasets
ChIP GM23338 ENCSR214ZAV.CREB1.GM23338 113 bp overlap
ChIP WA01 ENCSR000BSN.CREB1.WA01 155 bp overlap
DPF2 1 dataset
ChIP GM12878 ENCSR509FWH.DPF2.GM12878 79 bp overlap
DUX4 1 dataset
ChIP WA01 GSE94322.DUX4.WA01 134 bp overlap
EP300 6 datasets
ChIP GM12878 ENCFF242HCG 291 bp overlap
ChIP GM12878 ENCSR000BHB.EP300.GM12878 130 bp overlap
ChIP H1 ENCFF927IYK 140 bp overlap
ChIP H1 ENCFF937OPV 153 bp overlap
ChIP WA01 ENCSR000BKK.EP300.WA01 253 bp overlap
ChIP WA01 ENCSR000AUQ.EP300.WA01 124 bp overlap
ERG 1 dataset
ChIP VCaP GSE28950.ERG.VCaP 135 bp overlap
ESR1 1 dataset
ChIP MCF-7_TamR GSE128445.ESR1.MCF-7_TamR 81 bp overlap
FOS 1 dataset
ChIP CD4 GSE116695.FOS.CD4 142 bp overlap
FOXA1 8 datasets
ChIP MCF-7_JC4691 GSE126004.FOXA1.MCF-7_JC4691 55 bp overlap
ChIP MCF-7_JC4697 GSE126004.FOXA1.MCF-7_JC4697 117 bp overlap
ChIP MCF-7_vehicle_ab2 GSE112969.FOXA1.MCF-7_vehicle_ab2 76 bp overlap
ChIP ZR751 GSE72249.FOXA1.ZR751 61 bp overlap
ChIP breast_tumor_Male_14 GSE104399.FOXA1.breast_tumor_Male_14 138 bp overlap
ChIP primary-breast-cancer_B4_DSG GSE114737.FOXA1.primary-breast-cancer_B4_DSG 91 bp overlap
ChIP prostate_P23_T GSE130408.FOXA1.prostate_P23_T 55 bp overlap
ChIP prostate_P5_T GSE130408.FOXA1.prostate_P5_T 147 bp overlap
FOXD2 1 dataset
Motif DE_12h DE_12h-FOXD2_MA0847.4 11 bp overlap
FOXM1 2 datasets
ChIP GM12878 ENCFF264DJE 291 bp overlap
ChIP GM12878 ENCSR000BRU.FOXM1.GM12878 230 bp overlap
GATA3 1 dataset
ChIP MCF-7 GSE122847.GATA3.MCF-7 55 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 204 bp overlap
HOXB13 4 datasets
ChIP prostate_P13_T GSE130408.HOXB13.prostate_P13_T 291 bp overlap
ChIP prostate_P23_T GSE130408.HOXB13.prostate_P23_T 54 bp overlap
ChIP prostate_P29_T GSE130408.HOXB13.prostate_P29_T 83 bp overlap
ChIP prostate_P5_T GSE130408.HOXB13.prostate_P5_T 94 bp overlap
HOXB4 1 dataset
Motif DE_12h DE_12h-HOXB4_MA1499.2 6 bp overlap
HOXC4 1 dataset
Motif DE_12h DE_12h-HOXC4_MA1504.2 6 bp overlap
HOXD4 1 dataset
Motif DE_12h DE_12h-HOXD4_MA1507.2 6 bp overlap
Hnf1A 1 dataset
Motif DE_12h DE_12h-Hnf1A_MA1991.2 10 bp overlap
IRF4 1 dataset
ChIP GM12878 ENCSR000BGY.IRF4.GM12878 142 bp overlap
JUNB 2 datasets
ChIP GM12878 ENCFF667EJQ 291 bp overlap
ChIP GM12878 ENCSR897MMC.JUNB.GM12878 291 bp overlap
KLF13 1 dataset
Motif DE_12h DE_12h-KLF13_MA0657.2 17 bp overlap
MAX 2 datasets
ChIP H1 ENCFF601FOM 234 bp overlap
ChIP WA01 ENCSR000EUP.MAX.WA01 183 bp overlap
MED1 5 datasets
ChIP MM1-S_JQ1 GSE42161.MED1.MM1-S_JQ1 291 bp overlap
ChIP MM1-S_JQ1_5000NM GSE49224.MED1.MM1-S_JQ1_5000NM 291 bp overlap
ChIP MM1-S_JQ1_500NM GSE42355.MED1.MM1-S_JQ1_500NM 291 bp overlap
ChIP MM1-S_JQ1_50NM GSE49224.MED1.MM1-S_JQ1_50NM 291 bp overlap
ChIP MM1-S_JQ1_5NM GSE49224.MED1.MM1-S_JQ1_5NM 291 bp overlap
MEF2A 2 datasets
ChIP GM12878 ENCFF652BHX 259 bp overlap
ChIP GM12878 ENCSR000BKB.MEF2A.GM12878 246 bp overlap
MEF2B 1 dataset
ChIP GM12878 ENCSR177VFS.MEF2B.GM12878 156 bp overlap
MTA2 2 datasets
ChIP GM12878 ENCFF615CWQ 291 bp overlap
ChIP GM12878 ENCSR293QAR.MTA2.GM12878 190 bp overlap
MYC 2 datasets
ChIP MM1-S_DMSO GSE36354.MYC.MM1-S_DMSO 244 bp overlap
ChIP MM1-S_JQ1 GSE42161.MYC.MM1-S_JQ1 191 bp overlap
NANOG 9 datasets
ChIP GM23338 ENCFF065NZG 270 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 284 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 291 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 291 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 121 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 291 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 291 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 291 bp overlap
ChIP hESC GSE18292.NANOG.hESC 225 bp overlap
NFATC3 1 dataset
Motif DE_12h DE_12h-NFATC3_MA0625.3 6 bp overlap
NFIC 1 dataset
ChIP GM12878 ENCSR000BRN.NFIC.GM12878 210 bp overlap
NIPBL 4 datasets
ChIP WA09 GSE105028.NIPBL.WA09 254 bp overlap
ChIP WA09_heat-shock GSE105028.NIPBL.WA09_heat-shock 291 bp overlap
ChIP hESC_WNT3A GSE64758.NIPBL.hESC_WNT3A 232 bp overlap
ChIP hESC_WNT3A_ACTIVIN GSE64758.NIPBL.hESC_WNT3A_ACTIVIN 257 bp overlap
NKX2-1 1 dataset
ChIP NCI-H3122 GSE39998.NKX2-1.NCI-H3122 208 bp overlap
NKX6-1 1 dataset
Motif DE_12h DE_12h-NKX6-1_MA0674.2 7 bp overlap
NKX6-3 1 dataset
Motif DE_12h DE_12h-NKX6-3_MA1530.2 8 bp overlap
NOTCH1 1 dataset
ChIP HPBALL GSE39263.NOTCH1.HPBALL 255 bp overlap
NR2F1 1 dataset
ChIP GM12878 ENCSR514VYD.NR2F1.GM12878 133 bp overlap
NR4A1 1 dataset
Motif DE_12h DE_12h-NR4A1_MA1112.3 8 bp overlap
Nfatc1 1 dataset
Motif DE_12h DE_12h-Nfatc1_MA0624.3 6 bp overlap
Nr2e1 1 dataset
Motif DE_12h DE_12h-Nr2e1_MA0676.1 9 bp overlap
OTX2 1 dataset
ChIP WTC11 ENCFF634NAO 227 bp overlap
PCGF1 1 dataset
ChIP WA01 GSE104690.PCGF1.WA01 217 bp overlap
POU1F1 1 dataset
Motif DE_12h DE_12h-POU1F1_MA0784.3 14 bp overlap
POU2F1 1 dataset
Motif DE_12h DE_12h-POU2F1_MA0785.2 9 bp overlap
POU2F2 3 datasets
Motif DE_12h DE_12h-POU2F2_MA0507.3 13 bp overlap
ChIP GM12891 ENCFF166YPP 267 bp overlap
ChIP GM12891 ENCSR000BII.POU2F2.GM12891 124 bp overlap
POU3F1 1 dataset
Motif DE_12h DE_12h-POU3F1_MA0786.2 10 bp overlap
POU3F2 1 dataset
Motif DE_12h DE_12h-POU3F2_MA0787.1 12 bp overlap
POU3F3 1 dataset
Motif DE_12h DE_12h-POU3F3_MA0788.1 13 bp overlap
POU3F4 1 dataset
Motif DE_12h DE_12h-POU3F4_MA0789.1 9 bp overlap
POU5F1 11 datasets
ChIP GM23338 ENCFF333SNB 271 bp overlap
ChIP H1 ENCFF698ZAP 180 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 291 bp overlap
ChIP WA01 ENCSR000BMU.POU5F1.WA01 211 bp overlap
ChIP WA09 GSE105028.POU5F1.WA09 291 bp overlap
ChIP WA09_heat-shock GSE105028.POU5F1.WA09_heat-shock 289 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 242 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 291 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 291 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 246 bp overlap
ChIP hiPSC_3s2 GSE81899.POU5F1.hiPSC_3s2 146 bp overlap
POU6F1 1 dataset
Motif DE_12h DE_12h-POU6F1_MA1549.2 7 bp overlap
POU6F2 1 dataset
Motif DE_12h DE_12h-POU6F2_MA0793.2 9 bp overlap
RAD21 2 datasets
ChIP GM12878 ENCSR000BMY.RAD21.GM12878 126 bp overlap
ChIP WA09_heat-shock GSE105028.RAD21.WA09_heat-shock 125 bp overlap
RELA 4 datasets
ChIP GM12878 ENCSR000EAG.RELA.GM12878 151 bp overlap
ChIP LNCaP_DHT_TNFA GSE83860.RELA.LNCaP_DHT_TNFA 212 bp overlap
ChIP LNCaP_SICTR_TNFA GSE83860.RELA.LNCaP_SICTR_TNFA 220 bp overlap
ChIP LNCaP_SIFOXA1_TNFA GSE83860.RELA.LNCaP_SIFOXA1_TNFA 163 bp overlap
RELB 1 dataset
ChIP GM12878 ENCSR387QUV.RELB.GM12878 213 bp overlap
RUNX3 1 dataset
ChIP GM12878 ENCFF395WHA 254 bp overlap
SMAD3 1 dataset
ChIP BG03 GSE21614.SMAD3.BG03 153 bp overlap
SMARCA4 4 datasets
ChIP WA09 GSE105028.SMARCA4.WA09 291 bp overlap
ChIP WA09_heat-shock GSE105028.SMARCA4.WA09_heat-shock 291 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 291 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 291 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 291 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 127 bp overlap
SMARCC1 2 datasets
ChIP hiPSC GSE124903.SMARCC1.hiPSC 291 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 291 bp overlap
SOX2 4 datasets
ChIP H9 GSE46837.SOX2.H9 260 bp overlap
ChIP LK2_GFP GSE137459.SOX2.LK2_GFP 291 bp overlap
ChIP hESC GSE18292.SOX2.hESC 101 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 262 bp overlap
SP1 3 datasets
ChIP GM12878 ENCSR000BHK.SP1.GM12878 119 bp overlap
ChIP H1 ENCFF263FUH 138 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 230 bp overlap
SP4 1 dataset
ChIP WA01 ENCSR000BQV.SP4.WA01 130 bp overlap
SREBF1 2 datasets
Motif DE_12h DE_12h-SREBF1_MA0595.1 10 bp overlap
Motif DE_12h DE_12h-SREBF1_MA0829.3 10 bp overlap
SREBF2 1 dataset
Motif DE_12h DE_12h-SREBF2_MA0596.1 10 bp overlap
STAT3 5 datasets
ChIP MCF-7_jc5834 GSE126004.STAT3.MCF-7_jc5834 127 bp overlap
ChIP MCF-7_jc5836 GSE126004.STAT3.MCF-7_jc5836 76 bp overlap
ChIP MCF-7_jc5838 GSE126004.STAT3.MCF-7_jc5838 187 bp overlap
ChIP MCF-7_jc5840 GSE126004.STAT3.MCF-7_jc5840 291 bp overlap
ChIP MCF-7_jc5844 GSE126004.STAT3.MCF-7_jc5844 103 bp overlap
TCF3 1 dataset
ChIP NPC GSE154479.TCF3.NPC 253 bp overlap
TCF7 2 datasets
ChIP GM12878 ENCFF749DPM 291 bp overlap
ChIP GM12878 ENCSR501DKS.TCF7.GM12878 282 bp overlap
TCF7L2 2 datasets
Motif DE_12h DE_12h-TCF7L2_MA0523.2 9 bp overlap
ChIP Panc1 ENCFF829HHL 104 bp overlap
TLE3 1 dataset
ChIP LNCaP_r1881 GSE94682.TLE3.LNCaP_r1881 113 bp overlap
TRIM28 1 dataset
ChIP hESC GSE115387.TRIM28.hESC 235 bp overlap
ZNF184 1 dataset
Motif DE_12h DE_12h-ZNF184_MA2120.1 13 bp overlap
ZNF207 1 dataset
ChIP WA09 GSE118632.ZNF207.WA09 291 bp overlap