chr6 : 110,173,609 110,173,859
250 bp 94 TFs 2 linked genes
This 250 bp open chromatin element is linked to WASF1 and CDC40 and is bound by 94 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
WASF1 5.8 kb Proximal Proximity
CDC40 6.6 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:110,168,609 – 110,178,859
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
94 transcription factors
Source
Cell type
AFF1 1 dataset
ChIP K-562 ENCSR426URK.AFF1.K-562 121 bp overlap
AR 12 datasets
ChIP A-375_SLNCR GSE116189.AR.A-375_SLNCR 162 bp overlap
ChIP LNCaP_1F5_SIFOXA1 GSE30623.AR.LNCaP_1F5_SIFOXA1 158 bp overlap
ChIP LNCaP_FOXA1 ERP003503.AR.LNCaP_FOXA1 170 bp overlap
ChIP LNCaP_Talen_DHT GSE89938.AR.LNCaP_Talen_DHT 191 bp overlap
ChIP LNCaP_sgCHD1 GSE117430.AR.LNCaP_sgCHD1 172 bp overlap
ChIP LTAD_siControl GSE94577.AR.LTAD_siControl 182 bp overlap
ChIP MCF-7 GSE48930.AR.MCF-7 114 bp overlap
ChIP MDA-MB-453_R1881_SIPIAS1 GSE70161.AR.MDA-MB-453_R1881_SIPIAS1 100 bp overlap
ChIP VCaP-LTAD_DHT_10nM GSE94577.AR.VCaP-LTAD_DHT_10nM 140 bp overlap
ChIP VCaP_R1881_4H GSE84432.AR.VCaP_R1881_4H 164 bp overlap
ChIP VCaP_SH1_R1881 GSE79128.AR.VCaP_SH1_R1881 228 bp overlap
ChIP VCaP_SH2_R1881 GSE79128.AR.VCaP_SH2_R1881 174 bp overlap
ARID2 1 dataset
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.ARID2.BIN-67_lentivirus-SMARCA4-K785R 230 bp overlap
ARID4B 1 dataset
ChIP HepG2 ENCFF519OXJ 250 bp overlap
ARID5B 1 dataset
ChIP HepG2 ENCFF964FWK 250 bp overlap
ATRX 1 dataset
ChIP metastatic-neuroblastoma_SKNMM GSE100148.ATRX.metastatic-neuroblastoma_SKNMM 138 bp overlap
BCL11A 2 datasets
ChIP CD34_Day3_30min GSE104676.BCL11A.CD34_Day3_30min 56 bp overlap
ChIP CD34_Day5_30min GSE104676.BCL11A.CD34_Day5_30min 77 bp overlap
BRD4 2 datasets
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 250 bp overlap
ChIP SK-N-BE2-C_Naive-veh GSE107706.BRD4.SK-N-BE2-C_Naive-veh 113 bp overlap
CDK9 1 dataset
ChIP MOLT-4_JQ1 GSE79288.CDK9.MOLT-4_JQ1 169 bp overlap
CSDC2 1 dataset
ChIP SK-N-SH ENCFF868MXA 250 bp overlap
DRAP1 1 dataset
ChIP Hep-G2 ENCSR765MKZ.DRAP1.Hep-G2 152 bp overlap
EGR1 1 dataset
ChIP Hep-G2 ENCSR026GSW.EGR1.Hep-G2 195 bp overlap
EHMT2 2 datasets
ChIP K-562 ENCSR175EOM.EHMT2.K-562 246 bp overlap
ChIP K562 ENCFF053BWO 187 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 132 bp overlap
EP300 1 dataset
ChIP Hep-G2 ENCSR000BLW.EP300.Hep-G2 157 bp overlap
FOXA1 1 dataset
ChIP LNCaP_R1881 GSE69043.FOXA1.LNCaP_R1881 180 bp overlap
FOXA2 3 datasets
ChIP DE DE-FOXA2-1 250 bp overlap
ChIP DE DE-FOXA2-2 250 bp overlap
ChIP HepG2 ENCFF894AYY 250 bp overlap
FOXK1 1 dataset
ChIP Hep-G2 ENCSR603BJQ.FOXK1.Hep-G2 173 bp overlap
GATA1 3 datasets
ChIP CD34_Day7_30min GSE104676.GATA1.CD34_Day7_30min 55 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 185 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 152 bp overlap
GATA2 6 datasets
ChIP Hep-G2 ENCSR897LDT.GATA2.Hep-G2 191 bp overlap
ChIP HepG2 ENCFF905PYM 250 bp overlap
ChIP SH-SY5Y ENCFF485YIB 137 bp overlap
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 219 bp overlap
ChIP SK-N-SH ENCFF764OZD 183 bp overlap
ChIP TF1 GSE73207.GATA2.TF1 250 bp overlap
GATA3 3 datasets
ChIP Kelly GSE65664.GATA3.Kelly 105 bp overlap
ChIP SH-SY5Y ENCFF475HYF 162 bp overlap
ChIP SH-SY5Y ENCSR000EXZ.GATA3.SH-SY5Y 109 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 250 bp overlap
ChIP DE DE-GATA4-2 250 bp overlap
ChIP HepG2 ENCFF309FOQ 190 bp overlap
ChIP foregut GSE117136.GATA4.foregut 250 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 250 bp overlap
GATA6 6 datasets
ChIP DE DE-GATA6-1 250 bp overlap
ChIP DE DE-GATA6-2 250 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 250 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 250 bp overlap
ChIP foregut GSE117136.GATA6.foregut 216 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 242 bp overlap
GTF2F1 1 dataset
ChIP Hep-G2 GSE120104.GTF2F1.Hep-G2 128 bp overlap
HAND2 2 datasets
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 201 bp overlap
ChIP Kelly GSE94822.HAND2.Kelly 189 bp overlap
HDAC2 2 datasets
ChIP Hep-G2 ENCSR000BMC.HDAC2.Hep-G2 142 bp overlap
ChIP HepG2 ENCFF990GUQ 250 bp overlap
HNF4A 1 dataset
ChIP Hep-G2 ENCSR000BLF.HNF4A.Hep-G2 116 bp overlap
HSF1 1 dataset
ChIP MO91_27A_20UM GSE45852.HSF1.MO91_27A_20UM 172 bp overlap
HSF2 1 dataset
ChIP Hep-G2 ENCSR764ZBK.HSF2.Hep-G2 197 bp overlap
ISL1 1 dataset
ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 127 bp overlap
KLF6 1 dataset
ChIP Hep-G2 ENCSR757EKM.KLF6.Hep-G2 138 bp overlap
KMT2A 2 datasets
ChIP Hep-G2 ENCSR692GFR.KMT2A.Hep-G2 241 bp overlap
ChIP L826 GSE83671.KMT2A.L826 250 bp overlap
LDB1 1 dataset
ChIP HEP GSE52637.LDB1.HEP 177 bp overlap
MAX 2 datasets
ChIP Hep-G2 ENCSR168DYA.MAX.Hep-G2 216 bp overlap
ChIP HepG2 ENCFF507HCX 250 bp overlap
MIER1 2 datasets
ChIP K-562 ENCSR426MDV.MIER1.K-562 250 bp overlap
ChIP K562 ENCFF584AYC 250 bp overlap
MIER2 1 dataset
ChIP HepG2 ENCFF997QIX 250 bp overlap
MLX 1 dataset
ChIP Hep-G2 ENCSR125DAD.MLX.Hep-G2 120 bp overlap
MXD4 1 dataset
ChIP Hep-G2 ENCSR441KFW.MXD4.Hep-G2 138 bp overlap
MYBL2 2 datasets
ChIP A-673 GSE119971.MYBL2.A-673 250 bp overlap
ChIP Hep-G2 ENCSR581KCO.MYBL2.Hep-G2 196 bp overlap
NFYC 1 dataset
ChIP Hep-G2 ENCSR569ARC.NFYC.Hep-G2 143 bp overlap
NR3C1 3 datasets
ChIP LNCaP_1F5_SIFOXA1 GSE30623.NR3C1.LNCaP_1F5_SIFOXA1 169 bp overlap
ChIP T47D-A1-2_Dex GSE112491.NR3C1.T47D-A1-2_Dex 105 bp overlap
ChIP U2OS_SHHIC5 GSE65847.NR3C1.U2OS_SHHIC5 221 bp overlap
PGR 3 datasets
ChIP MCF-7_PROG GSE68355.PGR.MCF-7_PROG 216 bp overlap
ChIP T-47D_R5020 GSE68355.PGR.T-47D_R5020 173 bp overlap
ChIP T-47D_R5020-A1 GSE126859.PGR.T-47D_R5020-A1 161 bp overlap
PHF5A 1 dataset
ChIP Hep-G2 ENCSR191TLD.PHF5A.Hep-G2 159 bp overlap
PITX3 1 dataset
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 250 bp overlap
PPARG 1 dataset
ChIP Hep-G2 ENCSR130VQL.PPARG.Hep-G2 181 bp overlap
RBFOX2 2 datasets
ChIP HepG2 ENCFF554DMZ 250 bp overlap
ChIP HepG2 ENCFF554DMZ 117 bp overlap
RCOR1 1 dataset
ChIP SK-N-SH ENCSR009TKN.RCOR1.SK-N-SH 152 bp overlap
REST 63 datasets
ChIP A-549 ENCSR892DRK.REST.A-549 250 bp overlap
ChIP A-549 ENCSR000BQP.REST.A-549 238 bp overlap
ChIP A549 ENCFF148AIS 250 bp overlap
ChIP CD4 GSE49570.REST.CD4 192 bp overlap
ChIP GM12878 ENCFF235NGC 72 bp overlap
ChIP GM12878 ENCFF943QPB 137 bp overlap
ChIP GM12878 ENCSR000BGF.REST.GM12878 160 bp overlap
ChIP GM12878 ENCSR000BQS.REST.GM12878 199 bp overlap
ChIP GM23338 ENCFF024TCL 195 bp overlap
ChIP GM23338 ENCSR871KYB.REST.GM23338 194 bp overlap
ChIP GP5D GSE51234.REST.GP5D 250 bp overlap
ChIP H1 ENCFF203SWY 117 bp overlap
ChIP H1 ENCFF429RUE 173 bp overlap
ChIP HCT-116 ENCSR000BVI.REST.HCT-116 140 bp overlap
ChIP HEK293 ENCFF073DOT 250 bp overlap
ChIP HEK293 ENCSR896UBV.REST.HEK293 250 bp overlap
ChIP HL-60 ENCFF589LOF 191 bp overlap
ChIP HL-60 ENCSR000BTF.REST.HL-60 250 bp overlap
ChIP HeLa-S3 ENCFF911DTC 164 bp overlap
ChIP HeLa-S3 ENCSR000BMN.REST.HeLa-S3 250 bp overlap
ChIP Hep-G2 ENCSR000BOT.REST.Hep-G2 250 bp overlap
ChIP Hep-G2 ENCSR000BJL.REST.Hep-G2 165 bp overlap
ChIP HepG2 ENCFF122AWR 214 bp overlap
ChIP HepG2 ENCFF800JSL 147 bp overlap
ChIP Ishikawa ENCFF456OHV 218 bp overlap
ChIP Ishikawa ENCSR000BUU.REST.Ishikawa 250 bp overlap
ChIP K-562 ENCSR000ATM.REST.K-562 250 bp overlap
ChIP K-562 ENCSR137ZMQ.REST.K-562 250 bp overlap
ChIP K-562 ENCSR000BMW.REST.K-562 192 bp overlap
ChIP K-562 GSE70482.REST.K-562 184 bp overlap
ChIP K562 ENCFF430APM 153 bp overlap
ChIP K562 ENCFF685YZN 236 bp overlap
ChIP K562 ENCFF688UKW 248 bp overlap
ChIP K562 ENCFF758CZL 250 bp overlap
ChIP MCF-7 ENCFF893RRD 177 bp overlap
ChIP MCF-7 ENCSR000BSP.REST.MCF-7 250 bp overlap
ChIP NCI-H295R GSE49014.REST.NCI-H295R 109 bp overlap
ChIP PANC-1 ENCSR000BUP.REST.PANC-1 250 bp overlap
ChIP PANC-1 ENCSR000BJO.REST.PANC-1 171 bp overlap
ChIP PANC-1 ENCSR000BPK.REST.PANC-1 206 bp overlap
ChIP PFSK-1 ENCFF668WMP 166 bp overlap
ChIP PFSK-1 ENCFF845VHA 185 bp overlap
ChIP PFSK1 ENCSR000BOX.REST.PFSK1 250 bp overlap
ChIP PFSK1 ENCSR000BJP.REST.PFSK1 250 bp overlap
ChIP Panc1 ENCFF338WSQ 221 bp overlap
ChIP Panc1 ENCFF518EEQ 206 bp overlap
ChIP Panc1 ENCFF629OJO 75 bp overlap
ChIP SK-N-SH ENCFF635KBN 183 bp overlap
ChIP SK-N-SH ENCFF861MKH 190 bp overlap
ChIP SK-N-SH ENCSR000BJJ.REST.SK-N-SH 198 bp overlap
ChIP WA01 ENCSR000BHM.REST.WA01 250 bp overlap
ChIP WA01 ENCSR663WAR.REST.WA01 238 bp overlap
ChIP colorectal-cancer_CRC121_intact GSE112555.REST.colorectal-cancer_CRC121_intact 211 bp overlap
ChIP colorectal-cancer_shCDH1 GSE112555.REST.colorectal-cancer_shCDH1 250 bp overlap
ChIP colorectal-cancer_shCTRL_dissociated GSE112555.REST.colorectal-cancer_shCTRL_dissociated 211 bp overlap
ChIP colorectal-cancer_shCTRL_intact GSE112555.REST.colorectal-cancer_shCTRL_intact 242 bp overlap
ChIP hiPSC_IA12 GSE106870.REST.hiPSC_IA12 138 bp overlap
ChIP hiPSC_IB12 GSE106870.REST.hiPSC_IB12 141 bp overlap
ChIP liver ENCFF240FWT 250 bp overlap
ChIP liver ENCFF577AZT 250 bp overlap
ChIP liver ENCSR867WPH.REST.liver 181 bp overlap
ChIP liver ENCSR893QWP.REST.liver 207 bp overlap
ChIP metastatic-neuroblastoma_CHLA90 GSE100148.REST.metastatic-neuroblastoma_CHLA90 250 bp overlap
RREB1 1 dataset
ChIP HepG2 ENCFF986CSN 243 bp overlap
SAP130 1 dataset
ChIP HepG2 ENCFF892EHZ 180 bp overlap
SIN3A 1 dataset
ChIP Hep-G2 ENCSR000BGL.SIN3A.Hep-G2 127 bp overlap
SIX1 1 dataset
ChIP Hep-G2 ENCSR561BQM.SIX1.Hep-G2 148 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 216 bp overlap
SMAD3 1 dataset
ChIP Hep-G2 ENCSR005GZH.SMAD3.Hep-G2 121 bp overlap
SMARCA4 4 datasets
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4 200 bp overlap
ChIP TTC-1240 GSE124903.SMARCA4.TTC-1240 146 bp overlap
ChIP TTC-1240_R377H GSE124903.SMARCA4.TTC-1240_R377H 201 bp overlap
ChIP TTC-1240_delC GSE124903.SMARCA4.TTC-1240_delC 164 bp overlap
SOX13 2 datasets
ChIP Hep-G2 ENCSR445ACU.SOX13.Hep-G2 150 bp overlap
ChIP HepG2 ENCFF062VSQ 175 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 250 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 250 bp overlap
SOX5 1 dataset
ChIP HepG2 ENCFF470KZD 250 bp overlap
SOX6 2 datasets
ChIP Hep-G2 ENCSR766TSU.SOX6.Hep-G2 250 bp overlap
ChIP HepG2 ENCFF767OCK 250 bp overlap
SP1 1 dataset
ChIP Hep-G2 ENCSR460YAM.SP1.Hep-G2 77 bp overlap
TAL1 6 datasets
ChIP CD34 GSE52924.TAL1.CD34 164 bp overlap
ChIP HSPC-CD34pos GSE93372.TAL1.HSPC-CD34pos 186 bp overlap
ChIP K-562_dCas9-KRAB GSE132212.TAL1.K-562_dCas9-KRAB 155 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.TAL1.K-562_dCas9-LSD1 155 bp overlap
ChIP K-562_enCRISPRi-KL GSE132212.TAL1.K-562_enCRISPRi-KL 202 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.TAL1.K-562_enCRISPRi-LK 198 bp overlap
TBX2 3 datasets
ChIP Hep-G2 ENCSR410FEH.TBX2.Hep-G2 250 bp overlap
ChIP HepG2 ENCFF811TLA 250 bp overlap
ChIP Kelly GSE94822.TBX2.Kelly 188 bp overlap
TEAD4 2 datasets
ChIP A-549 ENCSR000BUD.TEAD4.A-549 143 bp overlap
ChIP A549 ENCFF243FTL 188 bp overlap
TFAP2B 1 dataset
ChIP SK-N-SH ENCFF869XXQ 250 bp overlap
TFE3 1 dataset
ChIP Hep-G2 ENCSR589SNT.TFE3.Hep-G2 142 bp overlap
WIZ 1 dataset
ChIP HepG2 ENCFF559CYZ 250 bp overlap
YY1 1 dataset
ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 190 bp overlap
ZBED4 1 dataset
ChIP Hep-G2 ENCSR409PMR.ZBED4.Hep-G2 159 bp overlap
ZBTB26 1 dataset
ChIP HepG2 ENCFF492SAJ 250 bp overlap
ZFHX3 1 dataset
ChIP HepG2 ENCFF082SJV 250 bp overlap
ZFP3 2 datasets
ChIP SK-N-SH ENCFF981MBE 250 bp overlap
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR581GUY.ZFP3.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 179 bp overlap
ZFP64 1 dataset
ChIP Hep-G2 ENCSR487CPI.ZFP64.Hep-G2 131 bp overlap
ZGPAT 1 dataset
ChIP Hep-G2 ENCSR704IGU.ZGPAT.Hep-G2 209 bp overlap
ZNF30 1 dataset
ChIP HEK293 GSE76494.ZNF30.HEK293 166 bp overlap
ZNF555 1 dataset
ChIP HEK293T GSE78099.ZNF555.HEK293T 85 bp overlap
ZNF567 1 dataset
ChIP HEK293T GSE78099.ZNF567.HEK293T 212 bp overlap
ZNF573 1 dataset
ChIP HEK293T GSE78099.ZNF573.HEK293T 250 bp overlap
ZNF766 1 dataset
ChIP HEK293T GSE78099.ZNF766.HEK293T 66 bp overlap
ZNF777 3 datasets
ChIP Hep-G2 ENCSR068ZQR.ZNF777.Hep-G2 192 bp overlap
ChIP HepG2 ENCFF362XDA 250 bp overlap
ChIP HepG2 ENCFF362XDA 250 bp overlap
ZNF792 1 dataset
ChIP HepG2 ENCFF825WPU 250 bp overlap