chr1 : 112,840,642 112,840,819
177 bp 82 TFs 1 linked gene
This 177 bp open chromatin element is linked to LINC01356 and is bound by 82 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
LINC01356 9.0 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:112,835,642 – 112,845,819
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
82 transcription factors
Source
Cell type
ARID1A 1 dataset
ChIP endometrial-epithelial-cells GSE106660.ARID1A.endometrial-epithelial-cells 86 bp overlap
BCL6 1 dataset
ChIP SU-DHL-4 GSE119038.BCL6.SU-DHL-4 177 bp overlap
BHLHE40 4 datasets
ChIP GM12878 ENCFF010ZUU 109 bp overlap
ChIP GM12878 ENCFF521IZR 177 bp overlap
ChIP GM12878 ENCSR517QHU.BHLHE40.GM12878 177 bp overlap
ChIP GM12878 ENCSR987MTA.BHLHE40.GM12878 115 bp overlap
BRD3 1 dataset
ChIP HEK293T GSE39579.BRD3.HEK293T 177 bp overlap
BRD4 8 datasets
ChIP HCT-15 GSE73319.BRD4.HCT-15 64 bp overlap
ChIP Jurkat GSE83777.BRD4.Jurkat 157 bp overlap
ChIP MDA-MB-231_DMSO GSE116879.BRD4.MDA-MB-231_DMSO 171 bp overlap
ChIP MDA-MB-231_DMSO_rDNA GSE116879.BRD4.MDA-MB-231_DMSO_rDNA 171 bp overlap
ChIP MDA-MB-231_MGSK2801 GSE116879.BRD4.MDA-MB-231_MGSK2801 153 bp overlap
ChIP MDA-MB-231_MGSK2801_rDNA GSE116879.BRD4.MDA-MB-231_MGSK2801_rDNA 151 bp overlap
ChIP SW480 GSE110473.BRD4.SW480 177 bp overlap
ChIP SW480_16h_TNF-a GSE110473.BRD4.SW480_16h_TNF-a 177 bp overlap
CBFB 2 datasets
ChIP ME-1 GSE46044.CBFB.ME-1 177 bp overlap
ChIP ME-1 GSE117138.CBFB.ME-1 118 bp overlap
CDK9 3 datasets
ChIP MOLT-4_DMSO GSE79288.CDK9.MOLT-4_DMSO 177 bp overlap
ChIP MOLT-4_JQ1 GSE79288.CDK9.MOLT-4_JQ1 177 bp overlap
ChIP MV4-11_DMSO GSE82116.CDK9.MV4-11_DMSO 119 bp overlap
CDKN1B 2 datasets
ChIP MDA-BoM-1833_shp27 GSE112444.CDKN1B.MDA-BoM-1833_shp27 177 bp overlap
ChIP MDA-MB-231_p27CK-DD GSE112444.CDKN1B.MDA-MB-231_p27CK-DD 177 bp overlap
CEBPA 1 dataset
ChIP Kasumi-1_CEBPA-ER_E2 GSE102697.CEBPA.Kasumi-1_CEBPA-ER_E2 159 bp overlap
CEBPB 1 dataset
ChIP monocyte_INFg GSE98367.CEBPB.monocyte_INFg 54 bp overlap
CREBBP 1 dataset
ChIP tonsil_GCBc_p4 GSE89688.CREBBP.tonsil_GCBc_p4 177 bp overlap
DDX5 1 dataset
ChIP NTERA2 GSE58641.DDX5.NTERA2 99 bp overlap
EED 1 dataset
ChIP GM12878 ENCFF266FYW 177 bp overlap
EGR1 1 dataset
ChIP macrophage_D3 GSE136216.EGR1.macrophage_D3 108 bp overlap
EGR2 1 dataset
ChIP HEK293 ENCFF336LFH 177 bp overlap
EP300 3 datasets
ChIP 697 GSE138031.EP300.697 54 bp overlap
ChIP AML GSE131939.EP300.AML 169 bp overlap
ChIP AML_shaml1-eto GSE131939.EP300.AML_shaml1-eto 136 bp overlap
ERG 8 datasets
ChIP HUVEC-C GSE124891.ERG.HUVEC-C 177 bp overlap
ChIP HUVEC-C GSE128382.ERG.HUVEC-C 133 bp overlap
ChIP ME-1 GSE46044.ERG.ME-1 177 bp overlap
ChIP SEM GSE117864.ERG.SEM 177 bp overlap
ChIP SKNO-1 GSE23730.ERG.SKNO-1 177 bp overlap
ChIP TSU-1621MT GSE60477.ERG.TSU-1621MT 177 bp overlap
ChIP TSU-1621MT_ATRA GSE60477.ERG.TSU-1621MT_ATRA 177 bp overlap
ChIP arterial-endothelial-cells GSE128382.ERG.arterial-endothelial-cells 177 bp overlap
ETS1 5 datasets
ChIP 786-O GSE86092.ETS1.786-O 177 bp overlap
ChIP CTV-1_DSG GSE128835.ETS1.CTV-1_DSG 177 bp overlap
ChIP CTV-1_DSG_SPI1-mut GSE128835.ETS1.CTV-1_DSG_SPI1-mut 177 bp overlap
ChIP HUVEC-C_VEGF_12H GSE41166.ETS1.HUVEC-C_VEGF_12H 120 bp overlap
ChIP THP-6_shCtrl GSE138516.ETS1.THP-6_shCtrl 177 bp overlap
FLI1 8 datasets
ChIP A-673_2_KRAB_eSOX2_1 GSE106914.FLI1.A-673_2_KRAB_eSOX2_1 154 bp overlap
ChIP A-673_D11 GSE129155.FLI1.A-673_D11 177 bp overlap
ChIP A-673_D14 GSE129155.FLI1.A-673_D14 177 bp overlap
ChIP CTV-1_DSG GSE128835.FLI1.CTV-1_DSG 177 bp overlap
ChIP CTV-1_DSG_SPI1-mut GSE128835.FLI1.CTV-1_DSG_SPI1-mut 177 bp overlap
ChIP SEM GSE117864.FLI1.SEM 177 bp overlap
ChIP SKNO-1 GSE23730.FLI1.SKNO-1 177 bp overlap
ChIP UAE_ZINC GSE23730.FLI1.UAE_ZINC 175 bp overlap
FOXL2 2 datasets
ChIP HGrC1_C134W-TGF GSE138496.FOXL2.HGrC1_C134W-TGF 165 bp overlap
ChIP HGrC1_C134W-TGF_parental GSE138496.FOXL2.HGrC1_C134W-TGF_parental 152 bp overlap
FOXO1 1 dataset
ChIP CD34 GSE80773.FOXO1.CD34 165 bp overlap
FOXP1 1 dataset
ChIP B-cell_IgD-pos GSE114803.FOXP1.B-cell_IgD-pos 177 bp overlap
GABPA 1 dataset
ChIP K562 ENCFF139LXS 177 bp overlap
GATA2 2 datasets
ChIP SKH1 GSE87283.GATA2.SKH1 177 bp overlap
ChIP SKH1_RUNX1-EVI1_KD GSE87283.GATA2.SKH1_RUNX1-EVI1_KD 155 bp overlap
GATA3 1 dataset
ChIP Jurkat GSE76181.GATA3.Jurkat 130 bp overlap
HDAC2 1 dataset
ChIP pre-B-cell GSE107886.HDAC2.pre-B-cell 107 bp overlap
HIF1A 1 dataset
ChIP BEAS-2B GSE145834.HIF1A.BEAS-2B 75 bp overlap
IKZF1 5 datasets
ChIP BCR-ABL1 GSE58825.IKZF1.BCR-ABL1 129 bp overlap
ChIP BCR-ABL1_LAX2 GSE58825.IKZF1.BCR-ABL1_LAX2 177 bp overlap
ChIP GM12878 ENCFF753XDO 177 bp overlap
ChIP K-562 ENCSR395HWC.IKZF1.K-562 177 bp overlap
ChIP pre-B-cell GSE107886.IKZF1.pre-B-cell 177 bp overlap
IKZF2 4 datasets
ChIP GM12878 ENCFF238LYK 177 bp overlap
ChIP GM12878 ENCFF918AID 177 bp overlap
ChIP GM12878 ENCSR680UQE.IKZF2.GM12878 177 bp overlap
ChIP GM12878 ENCSR822AHX.IKZF2.GM12878 177 bp overlap
IKZF3 1 dataset
ChIP pre-B-cell GSE107886.IKZF3.pre-B-cell 177 bp overlap
INTS13 1 dataset
ChIP monocyte GSE106359.INTS13.monocyte 68 bp overlap
JMJD1C 3 datasets
ChIP HL-60 GSE63484.JMJD1C.HL-60 154 bp overlap
ChIP Kasumi-1 GSE63484.JMJD1C.Kasumi-1 177 bp overlap
ChIP THP-1 GSE63484.JMJD1C.THP-1 177 bp overlap
JUN 1 dataset
ChIP MDA-BoM-1833 GSE112444.JUN.MDA-BoM-1833 177 bp overlap
KDM1A 2 datasets
ChIP Kasumi-1_DMSO GSE71739.KDM1A.Kasumi-1_DMSO 128 bp overlap
ChIP NB4_DMSO GSE128528.KDM1A.NB4_DMSO 177 bp overlap
KMT2A 1 dataset
ChIP L826 GSE83671.KMT2A.L826 162 bp overlap
KMT2B 2 datasets
ChIP AML GSE112074.KMT2B.AML 177 bp overlap
ChIP AML_OG86 GSE112074.KMT2B.AML_OG86 177 bp overlap
LDB1 2 datasets
ChIP Kasumi-1_ctrl GSE121280.LDB1.Kasumi-1_ctrl 177 bp overlap
ChIP Kasumi-1_siRE GSE121280.LDB1.Kasumi-1_siRE 177 bp overlap
LMO1 1 dataset
ChIP Jurkat GSE94391.LMO1.Jurkat 177 bp overlap
LMO2 2 datasets
ChIP CCRF-CEM GSE33850.LMO2.CCRF-CEM 92 bp overlap
ChIP TSU-1621MT GSE60477.LMO2.TSU-1621MT 154 bp overlap
LYL1 1 dataset
ChIP THP-1 GSE63484.LYL1.THP-1 142 bp overlap
MAZ 2 datasets
ChIP HEK293 ENCFF994GSG 177 bp overlap
ChIP HEK293 ENCSR290SSQ.MAZ.HEK293 154 bp overlap
MED 1 dataset
ChIP SEM GSE83671.MED.SEM 177 bp overlap
MEF2B 1 dataset
ChIP tonsil GSE110682.MEF2B.tonsil 177 bp overlap
MTA2 1 dataset
ChIP pre-B-cell GSE107886.MTA2.pre-B-cell 177 bp overlap
MYB 6 datasets
ChIP DU528 GSE94000.MYB.DU528 177 bp overlap
ChIP Jurkat GSE59657.MYB.Jurkat 177 bp overlap
ChIP MOLT-3 GSE59657.MYB.MOLT-3 177 bp overlap
ChIP SEM GSE117864.MYB.SEM 156 bp overlap
ChIP THP-1 GSE90769.MYB.THP-1 177 bp overlap
ChIP THP-1_OG86 GSE90769.MYB.THP-1_OG86 177 bp overlap
MYC 1 dataset
ChIP endothelial cell of umbilical vein ENCFF537XOZ 175 bp overlap
MYOD1 1 dataset
ChIP RD_shSNAI2 GSE137168.MYOD1.RD_shSNAI2 177 bp overlap
NEUROD1 1 dataset
ChIP D283-Med GSE92582.NEUROD1.D283-Med 124 bp overlap
PAX5 3 datasets
ChIP GM12878 ENCSR000BHJ.PAX5.GM12878 124 bp overlap
ChIP NALM-6 GSE115764.PAX5.NALM-6 177 bp overlap
ChIP NALM-6 GSE126300.PAX5.NALM-6 177 bp overlap
PBX1 1 dataset
ChIP RCH-ACV GSE85988.PBX1.RCH-ACV 177 bp overlap
POLR2A 2 datasets
ChIP HL-60 ENCFF321XKE 147 bp overlap
ChIP endothelial cell of umbilical vein ENCFF303XUJ 177 bp overlap
POU2F2 1 dataset
ChIP pre-B-cell GSE107886.POU2F2.pre-B-cell 177 bp overlap
RAD21 4 datasets
ChIP THP-1_PMA_IFNb-0h GSE103477.RAD21.THP-1_PMA_IFNb-0h 161 bp overlap
ChIP THP-1_PMA_IFNb-6h GSE103477.RAD21.THP-1_PMA_IFNb-6h 177 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-240m GSE103477.RAD21.THP-1_Pam3csk-000m-Flavo-240m 177 bp overlap
ChIP THP-1_Pam3csk-025m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-025m-Flavo-000m 96 bp overlap
RELB 1 dataset
ChIP GM12878 ENCSR387QUV.RELB.GM12878 177 bp overlap
REST 1 dataset
ChIP hippocampus GSE144226.REST.hippocampus 177 bp overlap
RNF2 4 datasets
ChIP GM12878 ENCSR679FAB.RNF2.GM12878 177 bp overlap
ChIP K-562 ENCSR820GND.RNF2.K-562 177 bp overlap
ChIP ME-1_Con GSE128771.RNF2.ME-1_Con 177 bp overlap
ChIP ME-1_KD GSE128771.RNF2.ME-1_KD 177 bp overlap
RUNX1 19 datasets
ChIP 697 GSE138031.RUNX1.697 177 bp overlap
ChIP AML GSE111917.RUNX1.AML 174 bp overlap
ChIP BCP-ALL_patient1 GSE109377.RUNX1.BCP-ALL_patient1 177 bp overlap
ChIP Jurkat GSE68976.RUNX1.Jurkat 177 bp overlap
ChIP Jurkat GSE76181.RUNX1.Jurkat 177 bp overlap
ChIP Jurkat GSE42575.RUNX1.Jurkat 54 bp overlap
ChIP Kasumi-1 GSE65427.RUNX1.Kasumi-1 177 bp overlap
ChIP Kasumi-1 GSE45738.RUNX1.Kasumi-1 177 bp overlap
ChIP Kasumi-1 GSE62847.RUNX1.Kasumi-1 177 bp overlap
ChIP ME-1 GSE117138.RUNX1.ME-1 177 bp overlap
ChIP ME-1 GSE46044.RUNX1.ME-1 177 bp overlap
ChIP ME-1_CBFB-MYH11-KD GSE117138.RUNX1.ME-1_CBFB-MYH11-KD 177 bp overlap
ChIP ME-1_Con GSE128771.RUNX1.ME-1_Con 177 bp overlap
ChIP ME-1_KD GSE128771.RUNX1.ME-1_KD 177 bp overlap
ChIP NALM-6 GSE126300.RUNX1.NALM-6 177 bp overlap
ChIP NB4 GSE81992.RUNX1.NB4 177 bp overlap
ChIP SKH1_10d GSE87283.RUNX1.SKH1_10d 177 bp overlap
ChIP SKH1_RUNX1-EVI1_KD GSE87283.RUNX1.SKH1_RUNX1-EVI1_KD 177 bp overlap
ChIP THP-1 GSE79899.RUNX1.THP-1 166 bp overlap
RUNX1T1 8 datasets
ChIP Kasumi-1 GSE115115.RUNX1T1.Kasumi-1 177 bp overlap
ChIP Kasumi-1 GSE102697.RUNX1T1.Kasumi-1 177 bp overlap
ChIP Kasumi-1 GSE43834.RUNX1T1.Kasumi-1 134 bp overlap
ChIP Kasumi-1 GSE65427.RUNX1T1.Kasumi-1 113 bp overlap
ChIP Kasumi-1_CEBPA-ER GSE102697.RUNX1T1.Kasumi-1_CEBPA-ER 177 bp overlap
ChIP Kasumi-1_E2 GSE102697.RUNX1T1.Kasumi-1_E2 177 bp overlap
ChIP Kasumi-1_shControl-AE GSE115115.RUNX1T1.Kasumi-1_shControl-AE 177 bp overlap
ChIP Kasumi-1_shTAF1-AE GSE115115.RUNX1T1.Kasumi-1_shTAF1-AE 177 bp overlap
RUNX2 2 datasets
ChIP Karpas-45 GSE151819.RUNX2.Karpas-45 177 bp overlap
ChIP LNCaP-C4-2B GSE33889.RUNX2.LNCaP-C4-2B 96 bp overlap
RUNX3 1 dataset
ChIP GM12878 ENCFF395WHA 177 bp overlap
SKI 1 dataset
ChIP HL-60 GSE107553.SKI.HL-60 139 bp overlap
SMARCA4 3 datasets
ChIP CTV-1_delA GSE128835.SMARCA4.CTV-1_delA 163 bp overlap
ChIP K-562 ENCSR643VTW.SMARCA4.K-562 177 bp overlap
ChIP endometrial-epithelial-cells_KO GSE106660.SMARCA4.endometrial-epithelial-cells_KO 177 bp overlap
SMC1A 1 dataset
ChIP monocyte_INFg GSE98367.SMC1A.monocyte_INFg 87 bp overlap
SPI1 3 datasets
ChIP CTV-1_delQ GSE128835.SPI1.CTV-1_delQ 177 bp overlap
ChIP DC_96h_donorM GSE128834.SPI1.DC_96h_donorM 104 bp overlap
ChIP Kasumi-1_SICTR GSE60130.SPI1.Kasumi-1_SICTR 101 bp overlap
SREBP2 2 datasets
ChIP monocyte GSE129202.SREBP2.monocyte 127 bp overlap
ChIP monocyte_TNF GSE129202.SREBP2.monocyte_TNF 82 bp overlap
STAT1 2 datasets
ChIP CD14_INFG GSE43036.STAT1.CD14_INFG 177 bp overlap
ChIP CD14_INFG_LPS GSE43036.STAT1.CD14_INFG_LPS 174 bp overlap
STAT3 3 datasets
ChIP MDA-MB-231 GSE152203.STAT3.MDA-MB-231 157 bp overlap
ChIP MDA-MB-231_EtOH GSE85579.STAT3.MDA-MB-231_EtOH 77 bp overlap
ChIP monocyte_IFNg GSE120943.STAT3.monocyte_IFNg 104 bp overlap
TAL1 1 dataset
ChIP MOLT-3 GSE59657.TAL1.MOLT-3 177 bp overlap
TBX21 1 dataset
ChIP Th1_CD3-CD28_donor2 GSE81881.TBX21.Th1_CD3-CD28_donor2 127 bp overlap
TCF12 1 dataset
ChIP Kasumi-1 GSE23730.TCF12.Kasumi-1 177 bp overlap
TCF3 2 datasets
ChIP Kasumi-1 GSE43834.TCF3.Kasumi-1 177 bp overlap
ChIP RCH-ACV GSE85988.TCF3.RCH-ACV 177 bp overlap
TEAD4 3 datasets
ChIP MCF-7_BLRP_WT_Veh GSE125594.TEAD4.MCF-7_BLRP_WT_Veh 84 bp overlap
ChIP MDA-MB-231 GSE66081.TEAD4.MDA-MB-231 105 bp overlap
ChIP SK-MEL-147 GSE94488.TEAD4.SK-MEL-147 125 bp overlap
TFAP4 1 dataset
ChIP Kasumi-1 GSE45738.TFAP4.Kasumi-1 177 bp overlap
TP53 3 datasets
ChIP MDA-MB-231 GSE95303.TP53.MDA-MB-231 87 bp overlap
ChIP SW480_shp53_16h_TNF-a GSE115985.TP53.SW480_shp53_16h_TNF-a 177 bp overlap
ChIP UACC-257_2h_4GY GSE100292.TP53.UACC-257_2h_4GY 109 bp overlap
TRIM28 1 dataset
ChIP HEK293 ENCFF582MWI 65 bp overlap
WT1 1 dataset
ChIP HEK293 ENCSR966PJJ.WT1.HEK293 84 bp overlap
ZBTB1 2 datasets
ChIP Jurkat_ZBTB1-KO_Asp-deprivation_cDNA GSE145783.ZBTB1.Jurkat_ZBTB1-KO_Asp-deprivation_cDNA 177 bp overlap
ChIP Jurkat_ZBTB1-KO_cDNA GSE145783.ZBTB1.Jurkat_ZBTB1-KO_cDNA 177 bp overlap
ZFHX2 1 dataset
ChIP HEK293 ENCFF167TUA 165 bp overlap
ZMYND8 1 dataset
ChIP MDA-MB-231 GSE108833.ZMYND8.MDA-MB-231 104 bp overlap
ZNF121 3 datasets
ChIP HEK293 ENCFF839FUF 177 bp overlap
ChIP HEK293 ENCSR224QDY.ZNF121.HEK293 177 bp overlap
ChIP WTC11 ENCFF291API 155 bp overlap