chr5 : 147,560,965 147,561,370
405 bp 85 TFs 1 linked gene
This 405 bp open chromatin element is linked to JAKMIP2-AS1 and is bound by 85 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
JAKMIP2-AS1 972 bp At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:147,555,965 – 147,566,370
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
85 transcription factors
Source
Cell type
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 272 bp overlap
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 391 bp overlap
BCL11A 3 datasets
ChIP H1 ENCFF833IPY 145 bp overlap
ChIP WA01 ENCSR000BMJ.BCL11A.WA01 152 bp overlap
ChIP WA01 ENCSR000BIP.BCL11A.WA01 151 bp overlap
BCOR 3 datasets
ChIP WA01 GSE104690.BCOR.WA01 276 bp overlap
ChIP WA01_KDM2B_KO GSE104690.BCOR.WA01_KDM2B_KO 211 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 376 bp overlap
BRD4 1 dataset
ChIP SW480 GSE73319.BRD4.SW480 224 bp overlap
CHD1 2 datasets
ChIP WA01 ENCSR000AQK.CHD1.WA01 286 bp overlap
ChIP WA01 ENCSR000AQK.CHD1.WA01 80 bp overlap
CHD7 4 datasets
ChIP H1 ENCFF126NLU 142 bp overlap
ChIP H1 ENCFF126NLU 405 bp overlap
ChIP WA01 ENCSR000AVA.CHD7.WA01 166 bp overlap
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 405 bp overlap
CREB1 2 datasets
ChIP H1 ENCFF955PMP 321 bp overlap
ChIP WA01 ENCSR000BSN.CREB1.WA01 106 bp overlap
CTCF 1 dataset
ChIP HT-1080 GSE135580.CTCF.HT-1080 234 bp overlap
EGR1 2 datasets
ChIP H1 ENCFF451BLH 261 bp overlap
ChIP WA01 ENCSR000BJA.EGR1.WA01 258 bp overlap
EHF 1 dataset
ChIP RWPE-1 GSE114241.EHF.RWPE-1 405 bp overlap
ELF1 1 dataset
Motif ES_0h ES_0h-ELF1_MA0473.4 9 bp overlap
ELF3 3 datasets
ChIP PDAC GSE64557.ELF3.PDAC 405 bp overlap
ChIP PDAC_KOKLF5 GSE64557.ELF3.PDAC_KOKLF5 405 bp overlap
ChIP PDAC_SHCTR GSE64557.ELF3.PDAC_SHCTR 405 bp overlap
EP300 1 dataset
ChIP WA01 ENCSR000BKK.EP300.WA01 274 bp overlap
ERF::FIGLA 2 datasets
Motif DE_12h DE_12h-ERFFIGLA_MA1934.2 13 bp overlap
Motif ES_0h ES_0h-ERFFIGLA_MA1934.2 13 bp overlap
ETV6 1 dataset
ChIP WTC11 ENCFF812SCD 363 bp overlap
EZH2 1 dataset
ChIP PC-9 ENCSR793USK.EZH2.PC-9 58 bp overlap
Elf5 1 dataset
Motif ES_0h ES_0h-Elf5_MA0136.4 8 bp overlap
FIGLA 2 datasets
Motif DE_12h DE_12h-FIGLA_MA0820.2 6 bp overlap
Motif ES_0h ES_0h-FIGLA_MA0820.2 6 bp overlap
FLI1 3 datasets
ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 273 bp overlap
ChIP A-673_2_KRAB_eSOX2_1 GSE106914.FLI1.A-673_2_KRAB_eSOX2_1 187 bp overlap
ChIP A-673_D17 GSE129155.FLI1.A-673_D17 260 bp overlap
FOXP1 1 dataset
ChIP H9 GSE31006.FOXP1.H9 269 bp overlap
FOXP4 1 dataset
ChIP WTC11 ENCFF708TAF 353 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 357 bp overlap
GRHL2 3 datasets
ChIP HBE GSE46194.GRHL2.HBE 146 bp overlap
ChIP OVCA429 GSE71018.GRHL2.OVCA429 178 bp overlap
ChIP PEO1 GSE71018.GRHL2.PEO1 185 bp overlap
HDAC2 3 datasets
ChIP H1 ENCFF353UJQ 405 bp overlap
ChIP WA01 ENCSR000AVB.HDAC2.WA01 147 bp overlap
ChIP WA01 ENCSR000BNR.HDAC2.WA01 293 bp overlap
IKZF2 1 dataset
Motif ES_0h ES_0h-IKZF2_MA2326.1 6 bp overlap
IRF4 1 dataset
ChIP NCI-H929 GSE56857.IRF4.NCI-H929 85 bp overlap
Ikzf3 1 dataset
Motif ES_0h ES_0h-Ikzf3_MA1992.2 9 bp overlap
JUN 2 datasets
ChIP ESC S34-ESC-d0-JUN-exp2 271 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 290 bp overlap
JUND 1 dataset
ChIP WA01 ENCSR000BKP.JUND.WA01 94 bp overlap
KDM5B 1 dataset
ChIP HCC2157 GSE46055.KDM5B.HCC2157 117 bp overlap
LEF1 1 dataset
ChIP hESC_WNT3A GSE64758.LEF1.hESC_WNT3A 274 bp overlap
Lef1 1 dataset
Motif ES_0h ES_0h-Lef1_MA0768.3 8 bp overlap
MAFK 1 dataset
Motif ES_0h ES_0h-MAFK_MA0496.4 10 bp overlap
MED1 1 dataset
ChIP hESC_PRIMED GSE69646.MED1.hESC_PRIMED 405 bp overlap
MED12 1 dataset
ChIP leiomyoma_PT886 GSE128230.MED12.leiomyoma_PT886 57 bp overlap
MORC2 1 dataset
ChIP H9 GSE95374.MORC2.H9 405 bp overlap
Mafg 1 dataset
Motif ES_0h ES_0h-Mafg_MA0659.4 12 bp overlap
NANOG 11 datasets
ChIP GM23338 ENCFF065NZG 269 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 290 bp overlap
ChIP H1 ENCFF747ZPQ 220 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 405 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 358 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 323 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 405 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 405 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 405 bp overlap
ChIP hESC GSE18292.NANOG.hESC 360 bp overlap
ChIP hESC GSE20650.NANOG.hESC 357 bp overlap
NIPBL 3 datasets
ChIP hESC GSE64758.NIPBL.hESC 231 bp overlap
ChIP hESC_WNT3A GSE64758.NIPBL.hESC_WNT3A 293 bp overlap
ChIP hESC_WNT3A_ACTIVIN GSE64758.NIPBL.hESC_WNT3A_ACTIVIN 312 bp overlap
POLR2A 4 datasets
ChIP GM23338 ENCFF450WCS 193 bp overlap
ChIP H1 ENCFF566JSR 306 bp overlap
ChIP H1 ENCFF770YBQ 361 bp overlap
ChIP H1 ENCFF833NJP 175 bp overlap
POU4F2 1 dataset
ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 126 bp overlap
POU5F1 6 datasets
ChIP HUES-8 GSE109524.POU5F1.HUES-8 381 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 405 bp overlap
ChIP WA09_heat-shock GSE105028.POU5F1.WA09_heat-shock 194 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 151 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 348 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 163 bp overlap
PRDM1 1 dataset
Motif ES_0h ES_0h-PRDM1_MA0508.4 7 bp overlap
PRDM14 1 dataset
ChIP hESC GSE138674.PRDM14.hESC 176 bp overlap
PROX1 1 dataset
ChIP SW480 GSE60390.PROX1.SW480 104 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 139 bp overlap
RBPJ 2 datasets
ChIP GIC GSE79734.RBPJ.GIC 143 bp overlap
ChIP GSC8-11_dasatinib GSE74557.RBPJ.GSC8-11_dasatinib 247 bp overlap
REST 1 dataset
ChIP WA01 ENCSR000BHM.REST.WA01 112 bp overlap
SALL3 1 dataset
ChIP hiPSC GSE104863.SALL3.hiPSC 285 bp overlap
SIN3A 3 datasets
ChIP H1 ENCFF042ZSL 405 bp overlap
ChIP WA01 ENCSR000EBO.SIN3A.WA01 235 bp overlap
ChIP WA01 ENCSR000BIS.SIN3A.WA01 189 bp overlap
SMAD3 2 datasets
ChIP BG03 GSE21614.SMAD3.BG03 181 bp overlap
ChIP BG03_DIFF_2H GSE36578.SMAD3.BG03_DIFF_2H 264 bp overlap
SMARCA2 2 datasets
ChIP NPC_K755R-siCT GSE122631.SMARCA2.NPC_K755R-siCT 405 bp overlap
ChIP NPC_R1159Q_AM GSE122631.SMARCA2.NPC_R1159Q_AM 68 bp overlap
SMARCA4 4 datasets
ChIP NPC_K755R-siAP GSE122631.SMARCA4.NPC_K755R-siAP 405 bp overlap
ChIP NPC_siCT GSE122631.SMARCA4.NPC_siCT 267 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 275 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 234 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 185 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 225 bp overlap
SMARCC1 2 datasets
ChIP hiPSC GSE124903.SMARCC1.hiPSC 240 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 356 bp overlap
SOX2 3 datasets
ChIP HNSC GSE69479.SOX2.HNSC 405 bp overlap
ChIP LK2_GFP GSE137459.SOX2.LK2_GFP 178 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 233 bp overlap
SP1 1 dataset
ChIP WA01 ENCSR000BIR.SP1.WA01 307 bp overlap
SP4 1 dataset
ChIP WA01 ENCSR000BQV.SP4.WA01 281 bp overlap
SP8 2 datasets
Motif DE_12h DE_12h-SP8_MA0747.2 11 bp overlap
Motif ES_0h ES_0h-SP8_MA0747.2 11 bp overlap
STAT3 2 datasets
ChIP HCC1187 GSE152203.STAT3.HCC1187 173 bp overlap
ChIP T-47D_JC5056 GSE126004.STAT3.T-47D_JC5056 254 bp overlap
TAF1 2 datasets
ChIP H1 ENCFF478SZO 405 bp overlap
ChIP WA01 ENCSR000BHO.TAF1.WA01 279 bp overlap
TAF7 1 dataset
ChIP WA01 ENCSR000BLU.TAF7.WA01 319 bp overlap
TBP 6 datasets
ChIP H1 ENCFF859IIO 338 bp overlap
ChIP WA01 ENCSR000ECB.TBP.WA01 229 bp overlap
ChIP hESC GSE122298.TBP.hESC 260 bp overlap
ChIP hESC_10h GSE122298.TBP.hESC_10h 226 bp overlap
ChIP hESC_2h GSE122298.TBP.hESC_2h 332 bp overlap
ChIP hESC_8h GSE122298.TBP.hESC_8h 182 bp overlap
TCF12 1 dataset
ChIP WA01 ENCSR000BIT.TCF12.WA01 344 bp overlap
TCF3 1 dataset
ChIP NPC GSE154479.TCF3.NPC 405 bp overlap
TEAD1 1 dataset
ChIP WTC11 ENCFF502QUV 383 bp overlap
TFAP2A 2 datasets
Motif DE_12h DE_12h-TFAP2A_MA0003.5 9 bp overlap
Motif ES_0h ES_0h-TFAP2A_MA0003.5 9 bp overlap
TFAP2C 2 datasets
Motif DE_12h DE_12h-TFAP2C_MA0814.3 9 bp overlap
Motif ES_0h ES_0h-TFAP2C_MA0814.3 9 bp overlap
Wt1 2 datasets
Motif DE_12h DE_12h-Wt1_MA1627.2 10 bp overlap
Motif ES_0h ES_0h-Wt1_MA1627.2 10 bp overlap
YY1 1 dataset
ChIP WA01 ENCSR000BKD.YY1.WA01 384 bp overlap
ZEB1 2 datasets
Motif DE_12h DE_12h-ZEB1_MA0103.4 6 bp overlap
Motif ES_0h ES_0h-ZEB1_MA0103.4 6 bp overlap
ZFP14 2 datasets
Motif DE_12h DE_12h-ZFP14_MA1972.1 15 bp overlap
Motif ES_0h ES_0h-ZFP14_MA1972.1 15 bp overlap
ZNF143 1 dataset
ChIP FLP143HA_T4 GSE39263.ZNF143.FLP143HA_T4 129 bp overlap
ZNF16 1 dataset
Motif ES_0h ES_0h-ZNF16_MA1654.2 21 bp overlap
ZNF189 1 dataset
Motif ES_0h ES_0h-ZNF189_MA1725.2 9 bp overlap
ZNF207 1 dataset
ChIP WA09 GSE118632.ZNF207.WA09 356 bp overlap
ZNF324 2 datasets
Motif DE_12h DE_12h-ZNF324_MA1977.2 14 bp overlap
Motif ES_0h ES_0h-ZNF324_MA1977.2 14 bp overlap
ZNF423 1 dataset
ChIP WTC11 ENCFF574PBR 219 bp overlap
ZNF449 1 dataset
Motif ES_0h ES_0h-ZNF449_MA1656.2 10 bp overlap
ZNF462 2 datasets
ChIP GM23338 ENCFF896CCA 251 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 240 bp overlap
ZNF680 1 dataset
Motif ES_0h ES_0h-ZNF680_MA1729.2 11 bp overlap
ZNF682 1 dataset
Motif ES_0h ES_0h-ZNF682_MA1599.2 11 bp overlap
Zfp335 1 dataset
Motif ES_0h ES_0h-Zfp335_MA2002.2 7 bp overlap