chr5 : 141,001,587 141,001,762
175 bp 90 TFs 0 linked genes
This 175 bp open chromatin element has no linked target genes and is bound by 90 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:140,996,587 – 141,006,762
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
90 transcription factors
Source
Cell type
ATF2 2 datasets
ChIP WA01 ENCSR000BQU.ATF2.WA01 73 bp overlap
ChIP WA01 ENCSR000BQU.ATF2.WA01 56 bp overlap
ATF3 1 dataset
ChIP HCT-116_CAMP GSE74355.ATF3.HCT-116_CAMP 84 bp overlap
BAF155 1 dataset
ChIP VCaP_shARID1A GSE110655.BAF155.VCaP_shARID1A 175 bp overlap
BCOR 1 dataset
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 175 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 175 bp overlap
BRD2 4 datasets
ChIP SK-MEL-147 GSE94488.BRD2.SK-MEL-147 62 bp overlap
ChIP SUM149PT_DMSO GSE131097.BRD2.SUM149PT_DMSO 175 bp overlap
ChIP SUM149PT_R_DMSO GSE131097.BRD2.SUM149PT_R_DMSO 175 bp overlap
ChIP THP-1_iBET-BD1 GSE138084.BRD2.THP-1_iBET-BD1 102 bp overlap
BRD4 13 datasets
ChIP Kelly_resistant GSE103030.BRD4.Kelly_resistant 175 bp overlap
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 175 bp overlap
ChIP NCI-H1963 GSE145028.BRD4.NCI-H1963 175 bp overlap
ChIP NCI-H1963_shASXL3 GSE145028.BRD4.NCI-H1963_shASXL3 175 bp overlap
ChIP NCI-H1963_shNONT GSE145028.BRD4.NCI-H1963_shNONT 169 bp overlap
ChIP PC-3_GDC-R_SAHA GSE137207.BRD4.PC-3_GDC-R_SAHA 175 bp overlap
ChIP SUM159PT_KO GSE131097.BRD4.SUM159PT_KO 175 bp overlap
ChIP SUM229PE_pos_DMSO_24h GSE87418.BRD4.SUM229PE_pos_DMSO_24h 94 bp overlap
ChIP cortical-interneuron GSE117508.BRD4.cortical-interneuron 77 bp overlap
ChIP cortical-interneuron_KCl-pos GSE117508.BRD4.cortical-interneuron_KCl-pos 108 bp overlap
ChIP cortical-interneuron_R133C_KCl-neg_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-neg_JQ1-neg 175 bp overlap
ChIP hESC GSE33281.BRD4.hESC 61 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 168 bp overlap
BRD9 1 dataset
ChIP G-401 GSE120234.BRD9.G-401 76 bp overlap
CDX2 2 datasets
ChIP LS180 GSE31939.CDX2.LS180 148 bp overlap
ChIP LS180_125 GSE31939.CDX2.LS180_125 130 bp overlap
CEBPA 6 datasets
ChIP THP-1_1-25D_24h GSE124032.CEBPA.THP-1_1-25D_24h 175 bp overlap
ChIP THP-1_1-25D_2h GSE124032.CEBPA.THP-1_1-25D_2h 110 bp overlap
ChIP THP-1_1-25D_8h GSE124032.CEBPA.THP-1_1-25D_8h 175 bp overlap
ChIP THP-1_EtOH_24h GSE124032.CEBPA.THP-1_EtOH_24h 175 bp overlap
ChIP THP-1_EtOH_2h GSE124032.CEBPA.THP-1_EtOH_2h 171 bp overlap
ChIP THP-1_EtOH_8h GSE124032.CEBPA.THP-1_EtOH_8h 135 bp overlap
CEBPB 11 datasets
ChIP A-549 ENCSR000BUB.CEBPB.A-549 173 bp overlap
ChIP A549 ENCFF235AIY 175 bp overlap
ChIP A549 ENCFF781RLJ 100 bp overlap
ChIP H1 ENCFF871PTR 175 bp overlap
ChIP HCT-116 ENCSR000BSD.CEBPB.HCT-116 175 bp overlap
ChIP HCT116 ENCFF097OLY 175 bp overlap
ChIP HeLa-S3 ENCFF722WEG 175 bp overlap
ChIP Ishikawa ENCSR000BTT.CEBPB.Ishikawa 156 bp overlap
ChIP MCF-7 ENCFF772ZTQ 175 bp overlap
ChIP MCF-7 ENCSR000BSR.CEBPB.MCF-7 175 bp overlap
ChIP WA01 ENCSR000EBV.CEBPB.WA01 175 bp overlap
CHD1 1 dataset
ChIP WA01 ENCSR000AQK.CHD1.WA01 54 bp overlap
CHD2 1 dataset
ChIP SK-N-SH ENCSR274SLQ.CHD2.SK-N-SH 175 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 175 bp overlap
CHD8 1 dataset
ChIP T-47D_ETOH_45 GSE62428.CHD8.T-47D_ETOH_45 142 bp overlap
CSDC2 1 dataset
ChIP SK-N-SH ENCFF868MXA 175 bp overlap
CTCF 1 dataset
ChIP T-47D_NaCl-isotonic-triptolide GSE111923.CTCF.T-47D_NaCl-isotonic-triptolide 175 bp overlap
DUX4 1 dataset
ChIP WA01 GSE94322.DUX4.WA01 121 bp overlap
E2F1 1 dataset
ChIP MDA-MB-231 GSE95303.E2F1.MDA-MB-231 84 bp overlap
E2F4 1 dataset
ChIP MCF-10A ENCSR000DOR.E2F4.MCF-10A 119 bp overlap
EHF 1 dataset
ChIP RWPE-1 GSE114241.EHF.RWPE-1 175 bp overlap
ELF3 3 datasets
ChIP PDAC GSE64557.ELF3.PDAC 175 bp overlap
ChIP PDAC_KOKLF5 GSE64557.ELF3.PDAC_KOKLF5 128 bp overlap
ChIP PDAC_SHCTR GSE64557.ELF3.PDAC_SHCTR 130 bp overlap
ERG 2 datasets
ChIP RWPE-1 GSE114241.ERG.RWPE-1 175 bp overlap
ChIP VCaP_shARID1A GSE110655.ERG.VCaP_shARID1A 158 bp overlap
ESR1 1 dataset
ChIP MCF-7_RUNX2_DOX GSE86538.ESR1.MCF-7_RUNX2_DOX 164 bp overlap
EZH2 1 dataset
ChIP Hep-3B2-1-7 GSE128137.EZH2.Hep-3B2-1-7 77 bp overlap
FOS 1 dataset
ChIP MCF-10A ENCSR000DON.FOS.MCF-10A 117 bp overlap
FOSL1 1 dataset
ChIP HCT116 ENCFF540ZXN 139 bp overlap
FOXA1 3 datasets
ChIP PDAC GSE64557.FOXA1.PDAC 175 bp overlap
ChIP PDAC_KOKLF5 GSE64557.FOXA1.PDAC_KOKLF5 175 bp overlap
ChIP PDAC_SHCTR GSE64557.FOXA1.PDAC_SHCTR 175 bp overlap
GATA2 1 dataset
ChIP SK-N-SH ENCSR706VOO.GATA2.SK-N-SH 65 bp overlap
GATA6 1 dataset
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 175 bp overlap
GLIS2 1 dataset
ChIP HEK293 ENCSR535DIA.GLIS2.HEK293 175 bp overlap
GTF2B 1 dataset
ChIP HeLa_ASYNC GSE71848.GTF2B.HeLa_ASYNC 141 bp overlap
HDAC2 1 dataset
ChIP K-562 ENCSR000BMG.HDAC2.K-562 116 bp overlap
HNF1B 1 dataset
ChIP PDAC GSE64557.HNF1B.PDAC 87 bp overlap
HOXB13 1 dataset
ChIP G-401 GSE65381.HOXB13.G-401 175 bp overlap
IRF1 1 dataset
ChIP PDAC GSE64557.IRF1.PDAC 175 bp overlap
KAT7 1 dataset
ChIP OCI-AML-3 GSE133516.KAT7.OCI-AML-3 108 bp overlap
KLF4 1 dataset
ChIP PDAC GSE64557.KLF4.PDAC 175 bp overlap
KLF9 1 dataset
ChIP GBM1A GSE62211.KLF9.GBM1A 133 bp overlap
KMT2B 1 dataset
ChIP AML_OG86 GSE112074.KMT2B.AML_OG86 175 bp overlap
MAZ 1 dataset
ChIP HEK293 GSE76494.MAZ.HEK293 175 bp overlap
MED26 2 datasets
ChIP HCT-116 GSE121355.MED26.HCT-116 175 bp overlap
ChIP HCT-116_aux GSE121355.MED26.HCT-116_aux 63 bp overlap
MXI1 1 dataset
ChIP SK-N-SH ENCSR000EIA.MXI1.SK-N-SH 128 bp overlap
MYB 1 dataset
ChIP THP-1_OG86 GSE90769.MYB.THP-1_OG86 80 bp overlap
MYC 3 datasets
ChIP CC-LP-1 GSE124430.MYC.CC-LP-1 175 bp overlap
ChIP MCF-10A ENCSR000DOS.MYC.MCF-10A 112 bp overlap
ChIP SK-N-AS GSE138295.MYC.SK-N-AS 175 bp overlap
MYCN 1 dataset
ChIP NB-1643 GSE138295.MYCN.NB-1643 144 bp overlap
NANOG 1 dataset
ChIP HUES-8 GSE109524.NANOG.HUES-8 136 bp overlap
NR1H2 1 dataset
ChIP HT29_GW3965_2H GSE77039.NR1H2.HT29_GW3965_2H 68 bp overlap
PATZ1 1 dataset
ChIP HEK293 ENCSR966ULI.PATZ1.HEK293 163 bp overlap
PCGF1 1 dataset
ChIP WA01 GSE104690.PCGF1.WA01 175 bp overlap
PHF19 1 dataset
ChIP DU145_CTR GSE135623.PHF19.DU145_CTR 175 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 175 bp overlap
POLR2A 8 datasets
ChIP H1 ENCFF770YBQ 175 bp overlap
ChIP H1 ENCFF833NJP 145 bp overlap
ChIP HCT116 ENCFF508RDJ 175 bp overlap
ChIP HCT116 ENCFF849NGT 120 bp overlap
ChIP SK-N-SH ENCFF683PFH 175 bp overlap
ChIP neural cell ENCFF604SPB 81 bp overlap
ChIP upper lobe of left lung ENCFF199JUI 175 bp overlap
ChIP upper lobe of left lung ENCFF640VPA 175 bp overlap
RAD21 2 datasets
ChIP HCT-116 GSE131606.RAD21.HCT-116 123 bp overlap
ChIP SK-N-SH ENCSR000EHX.RAD21.SK-N-SH 136 bp overlap
RBBP5 2 datasets
ChIP H1 ENCFF905HFL 174 bp overlap
ChIP WA01 ENCSR000AQC.RBBP5.WA01 60 bp overlap
RCOR1 1 dataset
ChIP SK-N-SH ENCSR009TKN.RCOR1.SK-N-SH 175 bp overlap
RELA 1 dataset
ChIP aortic-endothelial-cell_IL1B_D41 GSE139377.RELA.aortic-endothelial-cell_IL1B_D41 86 bp overlap
REST 4 datasets
ChIP colorectal-cancer_shCDH1 GSE112555.REST.colorectal-cancer_shCDH1 175 bp overlap
ChIP colorectal-cancer_shCTRL_intact GSE112555.REST.colorectal-cancer_shCTRL_intact 175 bp overlap
ChIP neural ENCSR000BTV.REST.neural 175 bp overlap
ChIP neural cell ENCFF882LXX 130 bp overlap
RUNX1 2 datasets
ChIP MCF-10A GSE129314.RUNX1.MCF-10A 90 bp overlap
ChIP VCaP_DHT24H GSE58428.RUNX1.VCaP_DHT24H 150 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 175 bp overlap
SMAD3 1 dataset
ChIP NCI-H441 GSE51509.SMAD3.NCI-H441 175 bp overlap
SMARCA4 3 datasets
ChIP MCF-7_parental GSE123284.SMARCA4.MCF-7_parental 175 bp overlap
ChIP NGP_ARID1A-mut2 GSE134626.SMARCA4.NGP_ARID1A-mut2 119 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 80 bp overlap
SMARCC1 2 datasets
ChIP DE_D1 S15-DE-d1-BAF155-exp1 175 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 175 bp overlap
SNAI2 1 dataset
ChIP PC-9_2DF GSE131687.SNAI2.PC-9_2DF 175 bp overlap
SP1 2 datasets
ChIP A-549 ENCSR000BPE.SP1.A-549 55 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 175 bp overlap
SP2 3 datasets
ChIP HEK293 ENCFF181QXT 53 bp overlap
ChIP HEK293 GSE76494.SP2.HEK293 175 bp overlap
ChIP HEK293 ENCSR807LQP.SP2.HEK293 175 bp overlap
SP3 2 datasets
ChIP HEK293 ENCFF087XLA 175 bp overlap
ChIP HEK293 ENCSR141PZA.SP3.HEK293 175 bp overlap
SP4 2 datasets
ChIP H1 ENCFF473YOB 175 bp overlap
ChIP HEK293 GSE76494.SP4.HEK293 175 bp overlap
SP7 1 dataset
ChIP HEK293 ENCSR468IJT.SP7.HEK293 175 bp overlap
STAT3 1 dataset
ChIP MCF-10A ENCSR000DOQ.STAT3.MCF-10A 101 bp overlap
SUPT5H 1 dataset
ChIP HCT-116_pThr806 GSE138548.SUPT5H.HCT-116_pThr806 175 bp overlap
TAF1 2 datasets
ChIP WA01 ENCSR000BHO.TAF1.WA01 175 bp overlap
ChIP neural ENCSR000BTX.TAF1.neural 153 bp overlap
TAF3 1 dataset
ChIP HCT-116 GSE43539.TAF3.HCT-116 85 bp overlap
TAF7 1 dataset
ChIP H1 ENCFF061XZZ 175 bp overlap
TBP 6 datasets
ChIP H1 ENCFF859IIO 129 bp overlap
ChIP WA01 ENCSR000ECB.TBP.WA01 175 bp overlap
ChIP hESC GSE122298.TBP.hESC 175 bp overlap
ChIP hESC_10h GSE122298.TBP.hESC_10h 66 bp overlap
ChIP hESC_2h GSE122298.TBP.hESC_2h 175 bp overlap
ChIP hESC_8h GSE122298.TBP.hESC_8h 104 bp overlap
TCF12 1 dataset
ChIP A-549 ENCSR000BQQ.TCF12.A-549 103 bp overlap
TP53 1 dataset
ChIP SW480_shp53_16h_TNF-a GSE115985.TP53.SW480_shp53_16h_TNF-a 121 bp overlap
UBN1 1 dataset
ChIP HeLa GSE45024.UBN1.HeLa 175 bp overlap
USF1 1 dataset
ChIP WTC11 ENCFF699QGS 175 bp overlap
YY1 3 datasets
ChIP H1 ENCFF524BTL 175 bp overlap
ChIP SK-N-SH ENCSR000BLZ.YY1.SK-N-SH 84 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 148 bp overlap
ZBTB17 1 dataset
ChIP HEK293 ENCFF865LIO 175 bp overlap
ZEB2 1 dataset
ChIP HEK293 ENCSR417VWF.ZEB2.HEK293 170 bp overlap
ZNF335 2 datasets
ChIP HEK293 ENCFF784SLD 175 bp overlap
ChIP HEK293 ENCFF784SLD 66 bp overlap