chr4 : 92,433,090 92,433,831
741 bp 108 TFs 2 linked genes
This 741 bp open chromatin element is linked to GRID2 and LNCPRESS2 and is bound by 108 transcription factors.
Linked Genes
2 genes
Link type
Gene Expression Dist. to TSS Distance Link type
GRID2 129.6 kb Distal Multiome
LNCPRESS2 156.5 kb Distal Multiome+HiCAR
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:92,428,090 – 92,438,831
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
108 transcription factors
Source
Cell type
ASH2L 2 datasets
ChIP H1 ENCFF399KAM 741 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 610 bp overlap
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 389 bp overlap
BATF 1 dataset
ChIP OCI-Ly10 GSE56857.BATF.OCI-Ly10 151 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 329 bp overlap
BRD4 5 datasets
ChIP HEK293_Ctrl GSE129407.BRD4.HEK293_Ctrl 190 bp overlap
ChIP HUVEC-C GSE60171.BRD4.HUVEC-C 170 bp overlap
ChIP hESC GSE33281.BRD4.hESC 61 bp overlap
ChIP hESC GSE33281.BRD4.hESC 61 bp overlap
ChIP hESC GSE33281.BRD4.hESC 165 bp overlap
CHD1 1 dataset
ChIP WA01 ENCSR000AQK.CHD1.WA01 362 bp overlap
CHD2 2 datasets
ChIP H1 ENCFF991MKH 331 bp overlap
ChIP H1 ENCFF991MKH 331 bp overlap
CHD7 1 dataset
ChIP WA01 ENCSR000AVA.CHD7.WA01 223 bp overlap
CLOCK 1 dataset
ChIP U2OS GSE44236.CLOCK.U2OS 181 bp overlap
CREB1 2 datasets
ChIP GM23338 ENCFF432ZEW 305 bp overlap
ChIP WA01 ENCSR000BSN.CREB1.WA01 154 bp overlap
CREM 1 dataset
ChIP WTC11 ENCFF209ZUE 466 bp overlap
CTBP2 1 dataset
ChIP WA01 ENCSR000EUO.CTBP2.WA01 363 bp overlap
CTCF 1 dataset
ChIP anterior-temporal-cortex_fetal GSE116825.CTCF.anterior-temporal-cortex_fetal 154 bp overlap
CUX2 1 dataset
Motif ES_0h ES_0h-CUX2_MA0755.2 9 bp overlap
DMRTA1 2 datasets
Motif DE_12h DE_12h-DMRTA1_MA1707.2 10 bp overlap
Motif ES_0h ES_0h-DMRTA1_MA1707.2 10 bp overlap
DMRTA2 2 datasets
Motif DE_12h DE_12h-DMRTA2_MA1478.2 6 bp overlap
Motif ES_0h ES_0h-DMRTA2_MA1478.2 6 bp overlap
DMRTC2 2 datasets
Motif DE_12h DE_12h-DMRTC2_MA1479.2 11 bp overlap
Motif ES_0h ES_0h-DMRTC2_MA1479.2 11 bp overlap
E2F6 2 datasets
ChIP H1 ENCFF785DWK 451 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 426 bp overlap
EP300 3 datasets
ChIP H1 ENCFF927IYK 297 bp overlap
ChIP WA01 ENCSR000BKK.EP300.WA01 218 bp overlap
ChIP hESC GSE17917.EP300.hESC 356 bp overlap
ERG 1 dataset
ChIP WTC11 ENCFF011YUL 281 bp overlap
ESR1 1 dataset
ChIP breast_tumor_Male_14 GSE104399.ESR1.breast_tumor_Male_14 337 bp overlap
ESR1_Y537C 1 dataset
ChIP SUM44PE__ESR1_mutant_LTED GSE100074.ESR1_Y537C.SUM44PE__ESR1_mutant_LTED 52 bp overlap
ETV6 1 dataset
ChIP WTC11 ENCFF812SCD 437 bp overlap
EZH2 2 datasets
ChIP THP-1 GSE135024.EZH2.THP-1 204 bp overlap
ChIP THP-1 GSE135024.EZH2.THP-1 256 bp overlap
FIGLA 1 dataset
Motif ES_0h ES_0h-FIGLA_MA0820.2 6 bp overlap
FOXA1 1 dataset
ChIP breast-cancer_heregulin GSE101407.FOXA1.breast-cancer_heregulin 349 bp overlap
FOXK1 1 dataset
ChIP WTC11 ENCFF875IGU 391 bp overlap
FOXP1 1 dataset
ChIP H9 GSE31006.FOXP1.H9 134 bp overlap
FOXP4 1 dataset
ChIP WTC11 ENCFF708TAF 377 bp overlap
GFI1 1 dataset
Motif ES_0h ES_0h-GFI1_MA0038.3 11 bp overlap
GLIS2 1 dataset
Motif ES_0h ES_0h-GLIS2_MA0736.1 14 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 259 bp overlap
GRHL2 1 dataset
ChIP OVCAR-3 GSE71018.GRHL2.OVCAR-3 178 bp overlap
GTF3C2 1 dataset
ChIP H9 GSE94418.GTF3C2.H9 230 bp overlap
Gfi1B 1 dataset
Motif ES_0h ES_0h-Gfi1B_MA0483.2 10 bp overlap
HDAC2 2 datasets
ChIP WA01 ENCSR000AVB.HDAC2.WA01 344 bp overlap
ChIP WA01 ENCSR000AVB.HDAC2.WA01 139 bp overlap
Hic1 1 dataset
Motif ES_0h ES_0h-Hic1_MA0739.2 8 bp overlap
JUN 3 datasets
ChIP ESC S24-ESC-d0-JUN-exp1 428 bp overlap
ChIP ESC S34-ESC-d0-JUN-exp2 459 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 453 bp overlap
KLF10 1 dataset
Motif ES_0h ES_0h-KLF10_MA1511.2 9 bp overlap
KLF12 1 dataset
Motif ES_0h ES_0h-KLF12_MA0742.2 9 bp overlap
KLF14 1 dataset
Motif ES_0h ES_0h-KLF14_MA0740.2 9 bp overlap
KLF5 1 dataset
Motif ES_0h ES_0h-KLF5_MA0599.1 10 bp overlap
MAX 5 datasets
ChIP H1 ENCFF601FOM 325 bp overlap
ChIP H1 ENCFF914VQY 357 bp overlap
ChIP WA01 ENCSR000EUP.MAX.WA01 227 bp overlap
ChIP WTC11 ENCFF223QFY 65 bp overlap
ChIP WTC11 ENCFF223QFY 515 bp overlap
MAZ 1 dataset
Motif ES_0h ES_0h-MAZ_MA1522.2 8 bp overlap
MEIS1 1 dataset
Motif ES_0h ES_0h-MEIS1_MA1639.2 9 bp overlap
NANOG 9 datasets
ChIP GM23338 ENCFF065NZG 280 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 281 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 585 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 372 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 391 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 371 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 267 bp overlap
ChIP hESC GSE20650.NANOG.hESC 266 bp overlap
ChIP hESC GSE18292.NANOG.hESC 192 bp overlap
NFATC3 1 dataset
Motif ES_0h ES_0h-NFATC3_MA0625.3 6 bp overlap
NFE2L1 1 dataset
ChIP WTC11 ENCFF644BPU 335 bp overlap
NR3C1 1 dataset
ChIP breast_tumor_Male_15 GSE104399.NR3C1.breast_tumor_Male_15 233 bp overlap
Nfatc1 1 dataset
Motif ES_0h ES_0h-Nfatc1_MA0624.3 6 bp overlap
PCGF1 1 dataset
ChIP WA01 GSE104690.PCGF1.WA01 250 bp overlap
POLR2A 7 datasets
ChIP GM23338 ENCFF450WCS 337 bp overlap
ChIP GM23338 ENCFF450WCS 123 bp overlap
ChIP H1 ENCFF566JSR 516 bp overlap
ChIP H1 ENCFF566JSR 605 bp overlap
ChIP H1 ENCFF770YBQ 471 bp overlap
ChIP H1 ENCFF833NJP 386 bp overlap
ChIP H1 ENCFF833NJP 411 bp overlap
POU5F1 12 datasets
ChIP BG03 GSE21614.POU5F1.BG03 175 bp overlap
ChIP GM23338 ENCFF333SNB 311 bp overlap
ChIP H1 ENCFF698ZAP 205 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 741 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 367 bp overlap
ChIP WA01 ENCSR000BMU.POU5F1.WA01 207 bp overlap
ChIP WA09 GSE105028.POU5F1.WA09 342 bp overlap
ChIP WA09_heat-shock GSE105028.POU5F1.WA09_heat-shock 288 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 296 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 312 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 508 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 343 bp overlap
PRDM9 1 dataset
Motif ES_0h ES_0h-PRDM9_MA1723.2 20 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 425 bp overlap
RREB1 1 dataset
Motif ES_0h ES_0h-RREB1_MA0073.2 19 bp overlap
RUNX1T1 1 dataset
ChIP Kasumi-1_CEBPA-ER_E2 GSE102697.RUNX1T1.Kasumi-1_CEBPA-ER_E2 148 bp overlap
SALL3 1 dataset
ChIP hiPSC GSE104863.SALL3.hiPSC 323 bp overlap
SIN3A 2 datasets
ChIP H1 ENCFF042ZSL 521 bp overlap
ChIP HUVEC-C GSE103245.SIN3A.HUVEC-C 162 bp overlap
SIX2 1 dataset
Motif DE_12h DE_12h-SIX2_MA1119.2 11 bp overlap
SIX4 1 dataset
ChIP WTC11 ENCFF891HYW 357 bp overlap
SMAD3 3 datasets
ChIP BG03 GSE21614.SMAD3.BG03 224 bp overlap
ChIP BG03_DIFF_0H GSE36578.SMAD3.BG03_DIFF_0H 356 bp overlap
ChIP BG03_DIFF_2H GSE36578.SMAD3.BG03_DIFF_2H 185 bp overlap
SMARCA4 1 dataset
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 598 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 264 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 275 bp overlap
SMARCC1 3 datasets
ChIP ESC S25-ESC-d0-BAF155-exp1 425 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 258 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 608 bp overlap
SOX2 2 datasets
ChIP hESC GSE18292.SOX2.hESC 120 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 328 bp overlap
SP1 4 datasets
Motif ES_0h ES_0h-SP1_MA0079.5 9 bp overlap
ChIP H1 ENCFF263FUH 321 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 269 bp overlap
ChIP WTC11 ENCFF688PEU 501 bp overlap
SP2 1 dataset
Motif ES_0h ES_0h-SP2_MA0516.3 9 bp overlap
SP4 1 dataset
Motif ES_0h ES_0h-SP4_MA0685.2 9 bp overlap
SP5 1 dataset
Motif ES_0h ES_0h-SP5_MA1965.2 6 bp overlap
SREBF1 2 datasets
Motif ES_0h ES_0h-SREBF1_MA0595.1 10 bp overlap
Motif ES_0h ES_0h-SREBF1_MA0829.3 10 bp overlap
SREBF2 2 datasets
Motif ES_0h ES_0h-SREBF2_MA0596.1 10 bp overlap
Motif ES_0h ES_0h-SREBF2_MA0828.3 10 bp overlap
TAF1 2 datasets
ChIP H1 ENCFF478SZO 366 bp overlap
ChIP H1 ENCFF478SZO 485 bp overlap
TBP 1 dataset
ChIP hESC_10h GSE122298.TBP.hESC_10h 173 bp overlap
TCF12 2 datasets
ChIP H1 ENCFF203EBH 251 bp overlap
ChIP WA01 ENCSR000BIT.TCF12.WA01 217 bp overlap
TCF3 1 dataset
ChIP NPC GSE154479.TCF3.NPC 675 bp overlap
TEAD1 1 dataset
ChIP WTC11 ENCFF502QUV 379 bp overlap
TFAP4 1 dataset
Motif ES_0h ES_0h-TFAP4_MA0691.1 10 bp overlap
TP53 1 dataset
ChIP H9_ectoderm GSE142050.TP53.H9_ectoderm 707 bp overlap
TRIM28 2 datasets
ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 577 bp overlap
ChIP hESC GSE115387.TRIM28.hESC 200 bp overlap
USF1 3 datasets
ChIP H1 ENCFF090WVU 63 bp overlap
ChIP WA01 ENCSR000BIU.USF1.WA01 294 bp overlap
ChIP WTC11 ENCFF699QGS 352 bp overlap
USF2 1 dataset
ChIP WTC11 ENCFF139JAW 378 bp overlap
Wt1 1 dataset
Motif ES_0h ES_0h-Wt1_MA1627.2 10 bp overlap
YY1 2 datasets
ChIP WA01 GSE39096.YY1.WA01 150 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 457 bp overlap
ZBTB43 1 dataset
ChIP WTC11 ENCFF058JUB 485 bp overlap
ZEB1 1 dataset
Motif ES_0h ES_0h-ZEB1_MA0103.4 6 bp overlap
ZFP14 1 dataset
Motif ES_0h ES_0h-ZFP14_MA1972.1 15 bp overlap
ZIC5 1 dataset
Motif ES_0h ES_0h-ZIC5_MA1584.2 15 bp overlap
ZNF114 1 dataset
ChIP GM23338 ENCFF631OSW 357 bp overlap
ZNF148 1 dataset
Motif ES_0h ES_0h-ZNF148_MA1653.2 10 bp overlap
ZNF16 1 dataset
Motif ES_0h ES_0h-ZNF16_MA1654.2 21 bp overlap
ZNF184 2 datasets
ChIP WTC11 ENCFF352POG 497 bp overlap
ChIP WTC11 ENCFF352POG 430 bp overlap
ZNF207 1 dataset
ChIP WA09 GSE118632.ZNF207.WA09 468 bp overlap
ZNF232 2 datasets
ChIP WTC11 ENCFF901BGD 450 bp overlap
ChIP WTC11 ENCFF901BGD 461 bp overlap
ZNF257 2 datasets
Motif DE_12h DE_12h-ZNF257_MA1710.2 10 bp overlap
Motif ES_0h ES_0h-ZNF257_MA1710.2 10 bp overlap
ZNF281 2 datasets
Motif ES_0h ES_0h-ZNF281_MA1630.3 10 bp overlap
ChIP WTC11 ENCFF551GAV 377 bp overlap
ZNF416 1 dataset
ChIP WTC11 ENCFF407TAZ 271 bp overlap
ZNF462 2 datasets
ChIP GM23338 ENCFF896CCA 251 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 581 bp overlap
ZNF512 1 dataset
ChIP WTC11 ENCFF086TTM 312 bp overlap
ZNF547 1 dataset
Motif ES_0h ES_0h-ZNF547_MA2334.1 13 bp overlap
ZNF684 1 dataset
Motif ES_0h ES_0h-ZNF684_MA1600.2 14 bp overlap