chr1 : 68,218,598 68,218,841
243 bp 109 TFs 0 linked genes
This 243 bp open chromatin element has no linked target genes and is bound by 109 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:68,213,598 – 68,223,841
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
109 transcription factors
Source
Cell type
AR 4 datasets
ChIP MDA-MB-453 ERP003503.AR.MDA-MB-453 140 bp overlap
ChIP MDA-MB-453_FOXA1 ERP003503.AR.MDA-MB-453_FOXA1 183 bp overlap
ChIP MDA-MB-453_R1881_SICTR GSE70161.AR.MDA-MB-453_R1881_SICTR 106 bp overlap
ChIP MDA-MB-453_R1881_SIPIAS1 GSE70161.AR.MDA-MB-453_R1881_SIPIAS1 157 bp overlap
ARNTL 1 dataset
ChIP U2OS GSE44236.ARNTL.U2OS 152 bp overlap
Arid3a 1 dataset
Motif DE_12h DE_12h-Arid3a_MA0151.1 6 bp overlap
BRD4 2 datasets
ChIP HEK293_sgNT GSE129407.BRD4.HEK293_sgNT 193 bp overlap
ChIP RH4_shCHD4 GSE140115.BRD4.RH4_shCHD4 207 bp overlap
CEBPB 1 dataset
ChIP monocyte GSE31621.CEBPB.monocyte 103 bp overlap
CHD7 2 datasets
ChIP WA01 ENCSR000AVA.CHD7.WA01 132 bp overlap
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 243 bp overlap
Crx 1 dataset
Motif DE_12h DE_12h-Crx_MA0467.3 6 bp overlap
E2F1 2 datasets
ChIP HMEC-1 GSE62425.E2F1.HMEC-1 234 bp overlap
ChIP HeLa GSE22478.E2F1.HeLa 140 bp overlap
E2F4 1 dataset
ChIP MCF-10A ENCSR000DOR.E2F4.MCF-10A 156 bp overlap
E2F6 3 datasets
Motif DE_12h DE_12h-E2F6_MA0471.3 8 bp overlap
ChIP H1 ENCFF785DWK 141 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 162 bp overlap
E2F8 1 dataset
Motif DE_12h DE_12h-E2F8_MA0865.3 9 bp overlap
ELL2 1 dataset
ChIP HeLa GSE40632.ELL2.HeLa 165 bp overlap
ESR1 3 datasets
ChIP breast_tumor_Male_10 GSE104399.ESR1.breast_tumor_Male_10 126 bp overlap
ChIP breast_tumor_Male_14 GSE104399.ESR1.breast_tumor_Male_14 209 bp overlap
ChIP primary-breast-cancer_B1_DSG GSE114737.ESR1.primary-breast-cancer_B1_DSG 159 bp overlap
ESR1_Y537C 1 dataset
ChIP SUM44PE__ESR1_mutant_LTED GSE100074.ESR1_Y537C.SUM44PE__ESR1_mutant_LTED 243 bp overlap
ESRRA 5 datasets
ChIP BT-474 GSE81651.ESRRA.BT-474 243 bp overlap
ChIP BT-474_HRG GSE81651.ESRRA.BT-474_HRG 243 bp overlap
ChIP SK-BR-3 GSE81651.ESRRA.SK-BR-3 243 bp overlap
ChIP SK-BR-3_EGF GSE81651.ESRRA.SK-BR-3_EGF 243 bp overlap
ChIP SK-BR-3_HRG GSE81651.ESRRA.SK-BR-3_HRG 224 bp overlap
ESRRG 1 dataset
ChIP cardiomyocyte GSE113760.ESRRG.cardiomyocyte 160 bp overlap
FOSL1 1 dataset
ChIP BT-549 GSE46166.FOSL1.BT-549 226 bp overlap
FOXA1 11 datasets
ChIP T-47D_CR3flp GSE99479.FOXA1.T-47D_CR3flp 147 bp overlap
ChIP T-47D_JC4745 GSE126004.FOXA1.T-47D_JC4745 90 bp overlap
ChIP T-47D_JC4747 GSE126004.FOXA1.T-47D_JC4747 136 bp overlap
ChIP T-47D_JC4748 GSE126004.FOXA1.T-47D_JC4748 232 bp overlap
ChIP T-47D_flp-ctrl GSE99479.FOXA1.T-47D_flp-ctrl 105 bp overlap
ChIP ZR-75-1_vehicle_ab2 GSE112969.FOXA1.ZR-75-1_vehicle_ab2 163 bp overlap
ChIP ZR751 GSE72249.FOXA1.ZR751 228 bp overlap
ChIP ZR751_DEX GSE72249.FOXA1.ZR751_DEX 165 bp overlap
ChIP ZR751_E2_TAM ERP000380.FOXA1.ZR751_E2_TAM 107 bp overlap
ChIP breast_tumor_Male_14 GSE104399.FOXA1.breast_tumor_Male_14 170 bp overlap
ChIP primary-breast-cancer_B1_DSG GSE114737.FOXA1.primary-breast-cancer_B1_DSG 114 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 146 bp overlap
ChIP DE DE-FOXA2-2 216 bp overlap
FOXM1 1 dataset
ChIP HeLa GSE52098.FOXM1.HeLa 214 bp overlap
GATAD1 1 dataset
ChIP HeLa GSE20303.GATAD1.HeLa 243 bp overlap
GSC 1 dataset
Motif DE_12h DE_12h-GSC_MA0648.2 6 bp overlap
GSC2 1 dataset
Motif DE_12h DE_12h-GSC2_MA0891.2 6 bp overlap
HOXB13 1 dataset
ChIP G-401 GSE65381.HOXB13.G-401 243 bp overlap
HOXD13 1 dataset
ChIP HEK293 ENCFF590OUV 243 bp overlap
IKZF1 1 dataset
Motif DE_12h DE_12h-IKZF1_MA1508.2 8 bp overlap
IKZF3 1 dataset
ChIP HEK293 ENCSR304AMN.IKZF3.HEK293 205 bp overlap
INSM2 2 datasets
ChIP HEK293 ENCFF008ZWC 243 bp overlap
ChIP HEK293 ENCSR382GSF.INSM2.HEK293 218 bp overlap
IRF2 1 dataset
ChIP keratinocyte_DOX GSE135677.IRF2.keratinocyte_DOX 163 bp overlap
JUN 1 dataset
ChIP DE_D2 S02-DE-d2-JUN-exp1 222 bp overlap
KDM5B 1 dataset
ChIP HCC2157 GSE46055.KDM5B.HCC2157 202 bp overlap
KMT2A 1 dataset
ChIP HEK293T_N-term_C104 GSE90762.KMT2A.HEK293T_N-term_C104 243 bp overlap
L3MBTL2 2 datasets
ChIP HEK293T ENCFF482NJV 185 bp overlap
ChIP HEK293T ENCSR862PNL.L3MBTL2.HEK293T 241 bp overlap
LIN9 2 datasets
ChIP MCF-10A_DOX GSE115787.LIN9.MCF-10A_DOX 171 bp overlap
ChIP MCF-10A_ctrl GSE115787.LIN9.MCF-10A_ctrl 181 bp overlap
Lef1 1 dataset
Motif DE_12h DE_12h-Lef1_MA0768.3 8 bp overlap
MAX 5 datasets
ChIP HeLa-S3 ENCFF019SXC 222 bp overlap
ChIP HeLa-S3 ENCSR000EZF.MAX.HeLa-S3 243 bp overlap
ChIP Ishikawa ENCFF064TDQ 243 bp overlap
ChIP Ishikawa ENCSR000BTY.MAX.Ishikawa 136 bp overlap
ChIP WA01 ENCSR000EUP.MAX.WA01 76 bp overlap
MED1 2 datasets
ChIP G296S GSE85628.MED1.G296S 123 bp overlap
ChIP G296S_2 GSE85628.MED1.G296S_2 123 bp overlap
MYC 1 dataset
ChIP HeLa-S3 ENCSR000EZD.MYC.HeLa-S3 199 bp overlap
MYCN 2 datasets
ChIP SHEP-21N GSE80151.MYCN.SHEP-21N 153 bp overlap
ChIP SHEP-21N_24h GSE80151.MYCN.SHEP-21N_24h 159 bp overlap
Msgn1 1 dataset
Motif DE_12h DE_12h-Msgn1_MA1524.3 10 bp overlap
NANOG 1 dataset
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 110 bp overlap
NCAPH2 1 dataset
ChIP IMR-90_FLAG_OIS GSE118494.NCAPH2.IMR-90_FLAG_OIS 226 bp overlap
NELFE 2 datasets
ChIP HeLa GSE125534.NELFE.HeLa 212 bp overlap
ChIP HeLa_DOX GSE125534.NELFE.HeLa_DOX 123 bp overlap
NFIA 1 dataset
Motif DE_12h DE_12h-NFIA_MA0670.2 6 bp overlap
NFIX 1 dataset
Motif DE_12h DE_12h-NFIX_MA0671.2 6 bp overlap
NR3C1 4 datasets
ChIP BEAS-2B_DEX_IA1 GSE125623.NR3C1.BEAS-2B_DEX_IA1 204 bp overlap
ChIP BEAS-2B_Veh_IA1 GSE125623.NR3C1.BEAS-2B_Veh_IA1 201 bp overlap
ChIP HCC1937 GSE152203.NR3C1.HCC1937 169 bp overlap
ChIP Ishikawa ENCSR000BJC.NR3C1.Ishikawa 112 bp overlap
OTX1 1 dataset
Motif DE_12h DE_12h-OTX1_MA0711.2 6 bp overlap
OTX2 1 dataset
Motif DE_12h DE_12h-OTX2_MA0712.3 7 bp overlap
PGR 1 dataset
ChIP T-47D_R5020-MTVL GSE126859.PGR.T-47D_R5020-MTVL 191 bp overlap
PITX1 1 dataset
Motif DE_12h DE_12h-PITX1_MA0682.3 6 bp overlap
PITX2 1 dataset
Motif DE_12h DE_12h-PITX2_MA1547.2 8 bp overlap
PITX3 1 dataset
Motif DE_12h DE_12h-PITX3_MA0714.2 6 bp overlap
POLR2A 5 datasets
ChIP esophagus muscularis mucosa ENCFF432ZCY 243 bp overlap
ChIP gastroesophageal sphincter ENCFF070PCA 205 bp overlap
ChIP prostate gland ENCFF881OMH 243 bp overlap
ChIP stomach ENCFF820WZN 222 bp overlap
ChIP vagina ENCFF305NWS 243 bp overlap
PRDM6 1 dataset
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 115 bp overlap
PSIP1 1 dataset
ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 81 bp overlap
RAD21 2 datasets
ChIP HAP1 GSE152721.RAD21.HAP1 197 bp overlap
ChIP HAP1_CTCF GSE126634.RAD21.HAP1_CTCF 241 bp overlap
RARA 1 dataset
ChIP hiPSC_D4 GSE109172.RARA.hiPSC_D4 140 bp overlap
RELA 1 dataset
ChIP HeLa-B2_TNFA GSE24518.RELA.HeLa-B2_TNFA 167 bp overlap
RHOXF1 1 dataset
Motif DE_12h DE_12h-RHOXF1_MA0719.2 6 bp overlap
SMARCA2 3 datasets
ChIP NPC_K755R-pos_ab GSE122631.SMARCA2.NPC_K755R-pos_ab 182 bp overlap
ChIP NPC_K755R-siCT GSE122631.SMARCA2.NPC_K755R-siCT 243 bp overlap
ChIP NPC_R1159Q_AM GSE122631.SMARCA2.NPC_R1159Q_AM 136 bp overlap
SMARCA4 7 datasets
ChIP 501-mel_SHSOX10 GSE61965.SMARCA4.501-mel_SHSOX10 172 bp overlap
ChIP NPC_K755R-siAP GSE122631.SMARCA4.NPC_K755R-siAP 243 bp overlap
ChIP NPC_K755R-siCT GSE122631.SMARCA4.NPC_K755R-siCT 243 bp overlap
ChIP NPC_R1159Q GSE122631.SMARCA4.NPC_R1159Q 146 bp overlap
ChIP NPC_siCT GSE122631.SMARCA4.NPC_siCT 243 bp overlap
ChIP NPC_siSOX GSE122631.SMARCA4.NPC_siSOX 243 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 242 bp overlap
SMARCC1 3 datasets
ChIP G-401_Dox GSE71504.SMARCC1.G-401_Dox 175 bp overlap
ChIP SK-N-MC_shEWSFLI1 GSE94275.SMARCC1.SK-N-MC_shEWSFLI1 184 bp overlap
ChIP TTC-549_Dox GSE71504.SMARCC1.TTC-549_Dox 149 bp overlap
SMC1A 1 dataset
ChIP primary-epidermal-keratinocyte_diff_d3 GSE84657.SMC1A.primary-epidermal-keratinocyte_diff_d3 222 bp overlap
SMC3 3 datasets
ChIP HeLa GSE126990.SMC3.HeLa 171 bp overlap
ChIP HeLa-Kyoto GSE102884.SMC3.HeLa-Kyoto 171 bp overlap
ChIP HeLa-Kyoto GSE138405.SMC3.HeLa-Kyoto 171 bp overlap
SNAI2 1 dataset
ChIP SMS-CTR_T48 GSE137168.SNAI2.SMS-CTR_T48 194 bp overlap
SOX2 1 dataset
ChIP HNSC GSE69479.SOX2.HNSC 166 bp overlap
SP2 1 dataset
Motif DE_12h DE_12h-SP2_MA0516.3 9 bp overlap
SP7 2 datasets
ChIP HEK293 ENCFF733RBE 243 bp overlap
ChIP HEK293 ENCSR468IJT.SP7.HEK293 243 bp overlap
SPIB 1 dataset
Motif DE_12h DE_12h-SPIB_MA0081.3 13 bp overlap
STAT3 16 datasets
ChIP BT-474 GSE152203.STAT3.BT-474 200 bp overlap
ChIP HCC1143_EtOH GSE85579.STAT3.HCC1143_EtOH 144 bp overlap
ChIP HCC1187 GSE152203.STAT3.HCC1187 243 bp overlap
ChIP HCC1937 GSE152203.STAT3.HCC1937 186 bp overlap
ChIP HCC70 GSE152203.STAT3.HCC70 134 bp overlap
ChIP HCC70_EtOH GSE85579.STAT3.HCC70_EtOH 243 bp overlap
ChIP MDA-MB-468_EtOH GSE85579.STAT3.MDA-MB-468_EtOH 243 bp overlap
ChIP T-47D_JC4737 GSE126004.STAT3.T-47D_JC4737 157 bp overlap
ChIP T-47D_JC4739 GSE126004.STAT3.T-47D_JC4739 158 bp overlap
ChIP T-47D_JC4741 GSE126004.STAT3.T-47D_JC4741 213 bp overlap
ChIP T-47D_JC4751 GSE126004.STAT3.T-47D_JC4751 212 bp overlap
ChIP T-47D_JC4753 GSE126004.STAT3.T-47D_JC4753 243 bp overlap
ChIP T-47D_JC4757 GSE126004.STAT3.T-47D_JC4757 243 bp overlap
ChIP T-47D_JC5054 GSE126004.STAT3.T-47D_JC5054 243 bp overlap
ChIP T-47D_JC5056 GSE126004.STAT3.T-47D_JC5056 241 bp overlap
ChIP T-47D_JC5062 GSE126004.STAT3.T-47D_JC5062 243 bp overlap
Spi1 1 dataset
Motif DE_12h DE_12h-Spi1_MA0080.7 13 bp overlap
T 1 dataset
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 161 bp overlap
TBX15 1 dataset
Motif DE_12h DE_12h-TBX15_MA0803.1 8 bp overlap
TBX18 1 dataset
Motif DE_12h DE_12h-TBX18_MA1565.2 9 bp overlap
TBX4 1 dataset
Motif DE_12h DE_12h-TBX4_MA0806.1 8 bp overlap
TCF7L2 1 dataset
ChIP MDA-MB-453 GSE45201.TCF7L2.MDA-MB-453 206 bp overlap
TEAD1 3 datasets
ChIP HEK293_siE1A GSE130135.TEAD1.HEK293_siE1A 243 bp overlap
ChIP keratinocyte GSE138727.TEAD1.keratinocyte 231 bp overlap
ChIP pancreas_12D ERP008682.TEAD1.pancreas_12D 181 bp overlap
TEAD4 7 datasets
ChIP BJ_fibroblast_CD13-neg GSE114367.TEAD4.BJ_fibroblast_CD13-neg 194 bp overlap
ChIP H1 ENCFF778PAX 221 bp overlap
ChIP HEK293_siE1A GSE130135.TEAD4.HEK293_siE1A 239 bp overlap
ChIP Ishikawa ENCFF772OTG 231 bp overlap
ChIP Ishikawa ENCSR000BSW.TEAD4.Ishikawa 170 bp overlap
ChIP SNU-216 GSE44416.TEAD4.SNU-216 243 bp overlap
ChIP T-47D_Veh GSE125594.TEAD4.T-47D_Veh 185 bp overlap
TFAP2A 1 dataset
Motif DE_12h DE_12h-TFAP2A_MA0810.2 11 bp overlap
TFAP2B 1 dataset
Motif DE_12h DE_12h-TFAP2B_MA0811.2 11 bp overlap
TFAP2C 3 datasets
Motif DE_12h DE_12h-TFAP2C_MA0524.3 11 bp overlap
ChIP HCC1954 GSE126897.TFAP2C.HCC1954 218 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 243 bp overlap
TFDP1 1 dataset
Motif DE_12h DE_12h-TFDP1_MA1122.2 8 bp overlap
TP53 1 dataset
ChIP keratinocyte_CISP GSE56674.TP53.keratinocyte_CISP 128 bp overlap
TP63 6 datasets
ChIP MCF-10A_Nutlin3A GSE111009.TP63.MCF-10A_Nutlin3A 243 bp overlap
ChIP keratinocyte GSE56674.TP63.keratinocyte 179 bp overlap
ChIP keratinocyte_D0 GSE59824.TP63.keratinocyte_D0 243 bp overlap
ChIP keratinocyte_D4 GSE59824.TP63.keratinocyte_D4 209 bp overlap
ChIP keratinocyte_D7 GSE59824.TP63.keratinocyte_D7 196 bp overlap
ChIP keratinocyte_epidermal GSE67382.TP63.keratinocyte_epidermal 235 bp overlap
TWIST1 4 datasets
ChIP SHEP-21N GSE80151.TWIST1.SHEP-21N 243 bp overlap
ChIP SHEP-21N GSE80151.TWIST1.SHEP-21N 219 bp overlap
ChIP SHEP-21N_24h GSE80151.TWIST1.SHEP-21N_24h 243 bp overlap
ChIP SHEP-21N_DOX_0H GSE80151.TWIST1.SHEP-21N_DOX_0H 243 bp overlap
YAP1 2 datasets
ChIP MCF-10A GSE97972.YAP1.MCF-10A 199 bp overlap
ChIP hiPSC GSE111930.YAP1.hiPSC 125 bp overlap
YY1 1 dataset
ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 217 bp overlap
YY1AP1 1 dataset
ChIP MCF-10A_DOX GSE115787.YY1AP1.MCF-10A_DOX 241 bp overlap
ZBED4 1 dataset
Motif DE_12h DE_12h-ZBED4_MA2328.1 10 bp overlap
ZBTB17 1 dataset
ChIP HEK293 ENCFF865LIO 243 bp overlap
ZBTB20 2 datasets
ChIP HEK293 ENCFF524ADK 243 bp overlap
ChIP HEK293 ENCSR460MBI.ZBTB20.HEK293 203 bp overlap
ZEB2 1 dataset
ChIP HEK293 ENCSR417VWF.ZEB2.HEK293 179 bp overlap
ZFP42 1 dataset
Motif DE_12h DE_12h-ZFP42_MA1651.2 13 bp overlap
ZFP64 1 dataset
ChIP HEK293 GSE76494.ZFP64.HEK293 172 bp overlap
ZFX 1 dataset
ChIP PrEC GSE102616.ZFX.PrEC 163 bp overlap
ZNF143 1 dataset
ChIP FLP143HA_T0 GSE39263.ZNF143.FLP143HA_T0 176 bp overlap
ZNF189 3 datasets
Motif DE_12h DE_12h-ZNF189_MA1725.2 9 bp overlap
ChIP HEK293 ENCFF638TIB 241 bp overlap
ChIP HEK293 ENCSR163RYW.ZNF189.HEK293 243 bp overlap
ZNF2 1 dataset
ChIP HEK293 ENCSR011CKE.ZNF2.HEK293 199 bp overlap
ZNF582 1 dataset
Motif DE_12h DE_12h-ZNF582_MA1983.2 19 bp overlap
ZNF600 1 dataset
ChIP HEK293 ENCFF785JSX 243 bp overlap
ZNF629 2 datasets
ChIP HEK293 ENCFF096ELQ 243 bp overlap
ChIP HEK293 ENCSR351NON.ZNF629.HEK293 230 bp overlap
ZNF680 1 dataset
Motif DE_12h DE_12h-ZNF680_MA1729.2 11 bp overlap
ZNF711 1 dataset
ChIP HEK293T GSE145160.ZNF711.HEK293T 243 bp overlap
ZNF92 1 dataset
ChIP retina_pigment GSE60024.ZNF92.retina_pigment 97 bp overlap
Zfp335 1 dataset
Motif DE_12h DE_12h-Zfp335_MA2002.2 7 bp overlap