chrX : 49,058,890 49,059,035
145 bp 77 TFs 1 linked gene
This 145 bp open chromatin element is linked to CCDC120 and is bound by 77 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
CCDC120 5.3 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chrX:49,053,890 – 49,064,035
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
77 transcription factors
Source
Cell type
AFF4 1 dataset
ChIP HeLa_DOX GSE40632.AFF4.HeLa_DOX 145 bp overlap
AR 6 datasets
ChIP LNCaP_G87R_shFOXA1_Ethanol GSE128883.AR.LNCaP_G87R_shFOXA1_Ethanol 145 bp overlap
ChIP LNCaP_GFP_Ethanol GSE128883.AR.LNCaP_GFP_Ethanol 119 bp overlap
ChIP LNCaP_GFP_shFOXA1_Ethanol GSE128883.AR.LNCaP_GFP_shFOXA1_Ethanol 145 bp overlap
ChIP LNCaP_L388M_shFOXA1_Ethanol GSE128883.AR.LNCaP_L388M_shFOXA1_Ethanol 122 bp overlap
ChIP MDA-MB-453_FOXA1 ERP003503.AR.MDA-MB-453_FOXA1 134 bp overlap
ChIP prostate-cancer_PDX_141 GSE130408.AR.prostate-cancer_PDX_141 51 bp overlap
ARID2 1 dataset
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.ARID2.BIN-67_lentivirus-SMARCA4 93 bp overlap
ARNT 1 dataset
ChIP MCF-7_aza GSE85352.ARNT.MCF-7_aza 95 bp overlap
BAF155 1 dataset
ChIP VCaP_shERG GSE110655.BAF155.VCaP_shERG 143 bp overlap
BRD2 8 datasets
ChIP HCC1806_BAZ2B_JQ1 GSE116879.BRD2.HCC1806_BAZ2B_JQ1 145 bp overlap
ChIP HCC1806_BAZ2BsiRNA GSE116879.BRD2.HCC1806_BAZ2BsiRNA 106 bp overlap
ChIP HCC1806_NTsiRNA GSE116879.BRD2.HCC1806_NTsiRNA 101 bp overlap
ChIP HCC1806_NTsiRNA_JQ1 GSE116879.BRD2.HCC1806_NTsiRNA_JQ1 140 bp overlap
ChIP SUM149PT_DMSO GSE131097.BRD2.SUM149PT_DMSO 145 bp overlap
ChIP SUM149PT_JQ1 GSE131097.BRD2.SUM149PT_JQ1 145 bp overlap
ChIP SUM149PT_R_DMSO GSE131097.BRD2.SUM149PT_R_DMSO 145 bp overlap
ChIP SUM149PT_R_JQ1 GSE131097.BRD2.SUM149PT_R_JQ1 109 bp overlap
BRD4 10 datasets
ChIP HCC1937 GSE124748.BRD4.HCC1937 62 bp overlap
ChIP HCT-15 GSE73319.BRD4.HCT-15 145 bp overlap
ChIP LNCaP-C4-2_F133V GSE88871.BRD4.LNCaP-C4-2_F133V 145 bp overlap
ChIP LNCaP-C4-2_OE GSE88871.BRD4.LNCaP-C4-2_OE 87 bp overlap
ChIP MM1-S GSE43743.BRD4.MM1-S 145 bp overlap
ChIP MM1-S_DMSO GSE42161.BRD4.MM1-S_DMSO 80 bp overlap
ChIP MM1-S_JQ1_150NM GSE49224.BRD4.MM1-S_JQ1_150NM 122 bp overlap
ChIP MM1-S_JQ1_50NM GSE42355.BRD4.MM1-S_JQ1_50NM 145 bp overlap
ChIP MM1-S_JQ1_5NM GSE42355.BRD4.MM1-S_JQ1_5NM 145 bp overlap
ChIP T-47D_DMSO GSE63581.BRD4.T-47D_DMSO 145 bp overlap
CBX1 1 dataset
ChIP Hep-G2 ENCSR819WZE.CBX1.Hep-G2 143 bp overlap
CDK9 4 datasets
ChIP MM1-S_DMSO GSE42161.CDK9.MM1-S_DMSO 52 bp overlap
ChIP MM1-S_JQ1_5000NM GSE49224.CDK9.MM1-S_JQ1_5000NM 145 bp overlap
ChIP MM1-S_JQ1_500NM GSE42355.CDK9.MM1-S_JQ1_500NM 71 bp overlap
ChIP MM1-S_JQ1_50NM GSE49224.CDK9.MM1-S_JQ1_50NM 145 bp overlap
CHD2 1 dataset
ChIP HeLa-S3 ENCSR000ECP.CHD2.HeLa-S3 142 bp overlap
CREB1 1 dataset
ChIP LNCaP-abl_SHFOXA1 GSE63034.CREB1.LNCaP-abl_SHFOXA1 145 bp overlap
CTCF 1 dataset
ChIP MM1-S GSE43743.CTCF.MM1-S 138 bp overlap
CTCF_s 1 dataset
ChIP HeLa-S3_biotin GSE108869.CTCF_s.HeLa-S3_biotin 135 bp overlap
DEK 1 dataset
ChIP HeLa-S3 ENCSR219MKK.DEK.HeLa-S3 145 bp overlap
E2F1 1 dataset
ChIP LNCaP_shRB GSE94958.E2F1.LNCaP_shRB 145 bp overlap
ELF1 1 dataset
ChIP MCF-7 ENCSR502NRF.ELF1.MCF-7 145 bp overlap
ELF3 1 dataset
ChIP PDAC GSE64557.ELF3.PDAC 145 bp overlap
ELL2 1 dataset
ChIP HeLa_DOX GSE40632.ELL2.HeLa_DOX 108 bp overlap
ESR1 9 datasets
ChIP Ishikawa_siNTC-72h GSE129803.ESR1.Ishikawa_siNTC-72h 123 bp overlap
ChIP Ishikawa_siNTC-96h GSE129803.ESR1.Ishikawa_siNTC-96h 79 bp overlap
ChIP MCF-7_PROG GSE68355.ESR1.MCF-7_PROG 145 bp overlap
ChIP MCF-7_RUNX2_DOX GSE86538.ESR1.MCF-7_RUNX2_DOX 145 bp overlap
ChIP T-47D_DMSO GSE148277.ESR1.T-47D_DMSO 145 bp overlap
ChIP T-47D_Y537S GSE148277.ESR1.T-47D_Y537S 145 bp overlap
ChIP T-47D_Y537S_E2 GSE148277.ESR1.T-47D_Y537S_E2 145 bp overlap
ChIP breast_tumor_Male_19 GSE104399.ESR1.breast_tumor_Male_19 89 bp overlap
ChIP breast_tumor_Male_21 GSE104399.ESR1.breast_tumor_Male_21 79 bp overlap
GLIS2 2 datasets
ChIP HCT-116_5FU GSE125927.GLIS2.HCT-116_5FU 145 bp overlap
ChIP HEK293 ENCSR535DIA.GLIS2.HEK293 52 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 145 bp overlap
GRHL2 2 datasets
ChIP MCF-7-WS8_VEH GSE113092.GRHL2.MCF-7-WS8_VEH 145 bp overlap
ChIP OVCA429 GSE71018.GRHL2.OVCA429 112 bp overlap
HDAC1 3 datasets
ChIP MCF-7_ARID1A-KO_clone14 GSE123284.HDAC1.MCF-7_ARID1A-KO_clone14 145 bp overlap
ChIP MCF-7_parental GSE123284.HDAC1.MCF-7_parental 145 bp overlap
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.HDAC1.MCF-7_parental_4-hydroxytamoxifen 145 bp overlap
HNF4A 2 datasets
ChIP IM95 GSE114018.HNF4A.IM95 122 bp overlap
ChIP liver ENCFF449HPV 145 bp overlap
IFNA1 1 dataset
ChIP Huh-7_GFP GSE110511.IFNA1.Huh-7_GFP 98 bp overlap
JUND 1 dataset
ChIP GP5D_SIRAD21 GSE51234.JUND.GP5D_SIRAD21 88 bp overlap
KDM4C 1 dataset
ChIP KYSE-150 GSE53938.KDM4C.KYSE-150 77 bp overlap
KDM5B 1 dataset
ChIP T-47D GSE46055.KDM5B.T-47D 145 bp overlap
KLF5 2 datasets
ChIP ESO-26 GSE132680.KLF5.ESO-26 103 bp overlap
ChIP KATO-III GSE51705.KLF5.KATO-III 130 bp overlap
MAX 3 datasets
ChIP HeLa-S3 ENCSR000EZF.MAX.HeLa-S3 109 bp overlap
ChIP HeLa-S3 ENCSR000ECN.MAX.HeLa-S3 143 bp overlap
ChIP MCF-7 ENCSR000BUL.MAX.MCF-7 131 bp overlap
MAZ 1 dataset
ChIP HeLa-S3 ENCSR000ECL.MAZ.HeLa-S3 145 bp overlap
MED1 6 datasets
ChIP HUVEC-C_siCTL GSE124892.MED1.HUVEC-C_siCTL 145 bp overlap
ChIP MM1-S_JQ1 GSE42161.MED1.MM1-S_JQ1 120 bp overlap
ChIP MM1-S_JQ1_5000NM GSE49224.MED1.MM1-S_JQ1_5000NM 145 bp overlap
ChIP MM1-S_JQ1_500NM GSE42355.MED1.MM1-S_JQ1_500NM 145 bp overlap
ChIP MM1-S_JQ1_50NM GSE49224.MED1.MM1-S_JQ1_50NM 145 bp overlap
ChIP MM1-S_JQ1_5NM GSE49224.MED1.MM1-S_JQ1_5NM 72 bp overlap
MED26 1 dataset
ChIP HCT-116_aux GSE121355.MED26.HCT-116_aux 100 bp overlap
MXI1 1 dataset
ChIP HeLa-S3 ENCSR000ECU.MXI1.HeLa-S3 103 bp overlap
MYC 5 datasets
ChIP GP5D GSE51234.MYC.GP5D 113 bp overlap
ChIP MCF-7 ENCFF542NWJ 145 bp overlap
ChIP MCF-7 ENCSR000DMQ.MYC.MCF-7 145 bp overlap
ChIP MM1-S_DMSO GSE36354.MYC.MM1-S_DMSO 118 bp overlap
ChIP P493-6 GSE77061.MYC.P493-6 92 bp overlap
MYCN 1 dataset
ChIP LNCaP_DHT GSE117304.MYCN.LNCaP_DHT 145 bp overlap
NCBP1 1 dataset
ChIP DLD-1_NELFCD-AID GSE144786.NCBP1.DLD-1_NELFCD-AID 99 bp overlap
NELFA 1 dataset
ChIP BT-474_INHHDAC ERP010664.NELFA.BT-474_INHHDAC 93 bp overlap
NELFCD 1 dataset
ChIP DLD-1_NELFCD-AID GSE144786.NELFCD.DLD-1_NELFCD-AID 109 bp overlap
NELFE 3 datasets
ChIP DLD-1_NELFCD-AID GSE144786.NELFE.DLD-1_NELFCD-AID 145 bp overlap
ChIP HCT-116_KAP1-KO GSE132705.NELFE.HCT-116_KAP1-KO 108 bp overlap
ChIP HeLa GSE125534.NELFE.HeLa 95 bp overlap
NFKB1 1 dataset
ChIP HEK293T_2KR GSE129618.NFKB1.HEK293T_2KR 85 bp overlap
NIPBL 2 datasets
ChIP GP5D GSE51234.NIPBL.GP5D 55 bp overlap
ChIP HCT-116_RAD21-mAC_500uM_auxin GSE104888.NIPBL.HCT-116_RAD21-mAC_500uM_auxin 57 bp overlap
NR2F2 1 dataset
ChIP MCF-7 ENCSR000BUY.NR2F2.MCF-7 115 bp overlap
PARP1 1 dataset
ChIP MCF-10A GSE93038.PARP1.MCF-10A 145 bp overlap
POLR2A 30 datasets
ChIP HCT116 ENCFF508RDJ 120 bp overlap
ChIP HeLa-S3 ENCFF224LWS 145 bp overlap
ChIP HeLa-S3 ENCFF455YYQ 145 bp overlap
ChIP HeLa-S3 ENCFF773DNG 145 bp overlap
ChIP MCF-7 ENCFF164XWP 145 bp overlap
ChIP MCF-7 ENCFF309IKZ 69 bp overlap
ChIP MCF-7 ENCFF411WCU 119 bp overlap
ChIP Peyer's patch ENCFF767HVN 84 bp overlap
ChIP Peyer's patch ENCFF990IYL 123 bp overlap
ChIP body of pancreas ENCFF084VJR 145 bp overlap
ChIP body of pancreas ENCFF501FEC 145 bp overlap
ChIP body of pancreas ENCFF675RCN 145 bp overlap
ChIP body of pancreas ENCFF727UBE 112 bp overlap
ChIP breast epithelium ENCFF045XXN 79 bp overlap
ChIP breast epithelium ENCFF955FMX 145 bp overlap
ChIP esophagus squamous epithelium ENCFF708IOX 145 bp overlap
ChIP prostate gland ENCFF832RQK 145 bp overlap
ChIP prostate gland ENCFF881OMH 144 bp overlap
ChIP prostate gland ENCFF882MXU 145 bp overlap
ChIP right lobe of liver ENCFF026NCK 145 bp overlap
ChIP stomach ENCFF607ZPU 145 bp overlap
ChIP stomach ENCFF820WZN 145 bp overlap
ChIP thyroid gland ENCFF979LRR 105 bp overlap
ChIP transverse colon ENCFF098HBD 145 bp overlap
ChIP transverse colon ENCFF193UMS 145 bp overlap
ChIP transverse colon ENCFF607LKE 98 bp overlap
ChIP transverse colon ENCFF610RWV 132 bp overlap
ChIP upper lobe of left lung ENCFF199JUI 145 bp overlap
ChIP upper lobe of left lung ENCFF640VPA 145 bp overlap
ChIP vagina ENCFF384GAB 145 bp overlap
POU2F1 2 datasets
ChIP T-47D GSE148277.POU2F1.T-47D 145 bp overlap
ChIP T-47D_D538G GSE148277.POU2F1.T-47D_D538G 145 bp overlap
RAD21 7 datasets
ChIP GP5D GSE51234.RAD21.GP5D 145 bp overlap
ChIP HCT-116 GSE131606.RAD21.HCT-116 118 bp overlap
ChIP HeLa-S3_CTCF-s-OE GSE108869.RAD21.HeLa-S3_CTCF-s-OE 145 bp overlap
ChIP MCF-7 GSE72082.RAD21.MCF-7 132 bp overlap
ChIP MCF-7_E2_SHCTCF ERP000209.RAD21.MCF-7_E2_SHCTCF 130 bp overlap
ChIP T-47D_triptolide GSE111923.RAD21.T-47D_triptolide 118 bp overlap
ChIP liver ENCFF522JHE 145 bp overlap
RXRA 1 dataset
ChIP liver ENCFF077DAP 145 bp overlap
SIN3A 6 datasets
ChIP HCT-116 ENCSR000BSG.SIN3A.HCT-116 69 bp overlap
ChIP WA01 ENCSR000EBO.SIN3A.WA01 128 bp overlap
ChIP WA01 ENCSR000BIS.SIN3A.WA01 99 bp overlap
ChIP hiPSC_IA12 GSE106870.SIN3A.hiPSC_IA12 145 bp overlap
ChIP hiPSC_IB12 GSE106870.SIN3A.hiPSC_IB12 136 bp overlap
ChIP hiPSC_IID12 GSE106870.SIN3A.hiPSC_IID12 109 bp overlap
SMAD2-3 1 dataset
ChIP HUVEC-C_TGFB1 GSE134556.SMAD2-3.HUVEC-C_TGFB1 145 bp overlap
SMAD3 4 datasets
ChIP H69_4Veh GSE145250.SMAD3.H69_4Veh 55 bp overlap
ChIP H69_5TGF GSE145250.SMAD3.H69_5TGF 83 bp overlap
ChIP H69_5Veh GSE145250.SMAD3.H69_5Veh 82 bp overlap
ChIP HCC1954 GSE104760.SMAD3.HCC1954 68 bp overlap
SMARCA4 6 datasets
ChIP 22Rv1_PTEN-KO GSE115615.SMARCA4.22Rv1_PTEN-KO 142 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-T910M 145 bp overlap
ChIP MCF-7_ARID1A-KO_4-OHT_clone14 GSE123284.SMARCA4.MCF-7_ARID1A-KO_4-OHT_clone14 77 bp overlap
ChIP MCF-7_ARID1A-KO_clone14 GSE123284.SMARCA4.MCF-7_ARID1A-KO_clone14 135 bp overlap
ChIP MCF-7_parental GSE123284.SMARCA4.MCF-7_parental 145 bp overlap
ChIP endometrial-epithelial-cells_KO GSE106660.SMARCA4.endometrial-epithelial-cells_KO 145 bp overlap
SMARCB1 3 datasets
ChIP HeLa-S3 ENCFF733PLR 145 bp overlap
ChIP HeLa-S3 ENCFF733PLR 145 bp overlap
ChIP HeLa-S3 ENCSR000EDK.SMARCB1.HeLa-S3 145 bp overlap
SMC1 1 dataset
ChIP HCT-116 GSE131606.SMC1.HCT-116 125 bp overlap
SMC3 4 datasets
ChIP GP5D GSE51234.SMC3.GP5D 97 bp overlap
ChIP HeLa GSE126990.SMC3.HeLa 145 bp overlap
ChIP HeLa-Kyoto GSE102884.SMC3.HeLa-Kyoto 145 bp overlap
ChIP HeLa-Kyoto GSE138405.SMC3.HeLa-Kyoto 145 bp overlap
SP1 3 datasets
ChIP HCT-116 ENCSR000BSF.SP1.HCT-116 103 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 138 bp overlap
ChIP liver ENCFF597LFJ 145 bp overlap
SP3 2 datasets
ChIP HEK293 ENCFF087XLA 145 bp overlap
ChIP HEK293 ENCSR141PZA.SP3.HEK293 145 bp overlap
SPDEF 1 dataset
ChIP MCF-7 ENCSR042GSX.SPDEF.MCF-7 145 bp overlap
STAG1 2 datasets
ChIP MCF-7_E2 ERP000209.STAG1.MCF-7_E2 118 bp overlap
ChIP MCF-7_E2_SHCTCF ERP000209.STAG1.MCF-7_E2_SHCTCF 132 bp overlap
STAT3 16 datasets
ChIP FaDu_DMSO GSE78212.STAT3.FaDu_DMSO 145 bp overlap
ChIP MCF-7 GSE152203.STAT3.MCF-7 134 bp overlap
ChIP MCF-7_jc5836 GSE126004.STAT3.MCF-7_jc5836 145 bp overlap
ChIP MCF-7_jc5838 GSE126004.STAT3.MCF-7_jc5838 145 bp overlap
ChIP MCF-7_jc5840 GSE126004.STAT3.MCF-7_jc5840 145 bp overlap
ChIP MCF-7_jc5844 GSE126004.STAT3.MCF-7_jc5844 145 bp overlap
ChIP MCF-7_jc5848 GSE126004.STAT3.MCF-7_jc5848 145 bp overlap
ChIP MDA-MB-361 GSE152203.STAT3.MDA-MB-361 145 bp overlap
ChIP T-47D_JC4735 GSE126004.STAT3.T-47D_JC4735 145 bp overlap
ChIP T-47D_JC4751 GSE126004.STAT3.T-47D_JC4751 145 bp overlap
ChIP T-47D_JC4753 GSE126004.STAT3.T-47D_JC4753 145 bp overlap
ChIP T-47D_JC4755 GSE126004.STAT3.T-47D_JC4755 145 bp overlap
ChIP T-47D_JC4757 GSE126004.STAT3.T-47D_JC4757 145 bp overlap
ChIP T-47D_JC5054 GSE126004.STAT3.T-47D_JC5054 145 bp overlap
ChIP T-47D_JC5056 GSE126004.STAT3.T-47D_JC5056 145 bp overlap
ChIP T-47D_JC5062 GSE126004.STAT3.T-47D_JC5062 145 bp overlap
SUPT5H 5 datasets
ChIP DLD-1_NELFCD-AID GSE144786.SUPT5H.DLD-1_NELFCD-AID 145 bp overlap
ChIP DLD-1_NELFCD-AID_treated GSE144786.SUPT5H.DLD-1_NELFCD-AID_treated 123 bp overlap
ChIP HCT-116_pThr806 GSE138548.SUPT5H.HCT-116_pThr806 128 bp overlap
ChIP HeLa GSE125534.SUPT5H.HeLa 95 bp overlap
ChIP HeLa_DOX GSE125534.SUPT5H.HeLa_DOX 112 bp overlap
TAF1 6 datasets
ChIP HeLa-S3 ENCFF556LCN 129 bp overlap
ChIP HeLa-S3 ENCSR000BHT.TAF1.HeLa-S3 145 bp overlap
ChIP Hep-G2 ENCSR000BJN.TAF1.Hep-G2 105 bp overlap
ChIP HepG2 ENCFF961AVP 145 bp overlap
ChIP Ishikawa ENCSR000BTO.TAF1.Ishikawa 115 bp overlap
ChIP WA01 ENCSR000BHO.TAF1.WA01 51 bp overlap
TAF3 1 dataset
ChIP HCT-116 GSE43539.TAF3.HCT-116 141 bp overlap
TBP 3 datasets
ChIP HeLa-S3 ENCFF715NNJ 145 bp overlap
ChIP HeLa-S3 ENCSR000EDD.TBP.HeLa-S3 145 bp overlap
ChIP hESC_10h GSE122298.TBP.hESC_10h 73 bp overlap
TEAD4 1 dataset
ChIP Ishikawa ENCFF772OTG 145 bp overlap
TFAP2C 2 datasets
ChIP MCF-7_ETOH GSE23852.TFAP2C.MCF-7_ETOH 126 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 145 bp overlap
XBP1 1 dataset
ChIP LNCaP_Tg GSE121880.XBP1.LNCaP_Tg 145 bp overlap
ZFX 7 datasets
ChIP C4-2B ENCFF652WZM 145 bp overlap
ChIP HCT-116 GSE102616.ZFX.HCT-116 66 bp overlap
ChIP HCT-116 ENCSR503GVO.ZFX.HCT-116 66 bp overlap
ChIP HCT116 ENCFF324IZY 145 bp overlap
ChIP HEK293T_22Rv1 GSE145160.ZFX.HEK293T_22Rv1 145 bp overlap
ChIP MCF-7 ENCFF009NAJ 145 bp overlap
ChIP MCF-7 GSE102616.ZFX.MCF-7 145 bp overlap
ZNF143 1 dataset
ChIP MCF-7 GSE76454.ZNF143.MCF-7 144 bp overlap
ZNF652 2 datasets
ChIP Hep-G2 ENCSR502GAX.ZNF652.Hep-G2 145 bp overlap
ChIP HepG2 ENCFF331VPZ 144 bp overlap