chr19:9,582,064–9,582,785

chr19 : 9,582,064 – 9,582,785

721 bp 99 TFs 13 linked genes

This 721 bp open chromatin element is linked to 13 target genes and is bound by 99 transcription factors.

Linked Genes

13 genes

Gene	Expression	Dist. to TSS	Distance	Link type
ZNF121		1.7 kb	Proximal	Proximity
ZNF561		38.7 kb	Distal	Multiome
ZNF561-AS1		38.8 kb	Distal	Multiome
ZNF426		43.9 kb	Distal	Multiome
ZNF562		92.6 kb	Distal	Multiome
ZNF266		146.9 kb	Distal	Multiome
ZNF177		206.1 kb	Distal	Multiome
ZNF846		210.7 kb	Distal	Multiome+HiCAR
FBXL12		245.3 kb	Distal	Multiome+HiCAR
UBL5		245.4 kb	Distal	Multiome
PIN1		252.8 kb	Distal	Multiome
ZNF559		258.3 kb	Distal	Multiome
ZNF699		272.6 kb	Distal	Multiome

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

99 transcription factors

Bcl11B 1 dataset

Motif DE_72h DE_72h-Bcl11B_MA1989.2 9 bp overlap

CHD1 2 datasets

ChIP WA01 ENCSR000AQK.CHD1.WA01 239 bp overlap

ChIP WA01 ENCSR000AQK.CHD1.WA01 247 bp overlap

CREB1 1 dataset

Motif DE_72h DE_72h-CREB1_MA0018.5 8 bp overlap

Motif DE_72h DE_72h-CUX2_MA0755.2 9 bp overlap

EOMES 1 dataset

Motif DE_72h DE_72h-EOMES_MA0800.2 9 bp overlap

ESRRA 1 dataset

Motif DE_72h DE_72h-ESRRA_MA0592.4 9 bp overlap

ESRRB 1 dataset

Motif DE_72h DE_72h-ESRRB_MA0141.4 10 bp overlap

ETV5::DRGX 1 dataset

Motif DE_72h DE_72h-ETV5DRGX_MA1944.2 12 bp overlap

Esrrg 1 dataset

Motif DE_72h DE_72h-Esrrg_MA0643.2 9 bp overlap

FLI1::DRGX 1 dataset

Motif DE_72h DE_72h-FLI1DRGX_MA1949.2 14 bp overlap

ChIP HCT-116_A7A GSE152144.FOS.HCT-116_A7A 311 bp overlap

ChIP HCT-116_A7A GSE152144.FOS.HCT-116_A7A 160 bp overlap

FOXA2 1 dataset

ChIP DE DE-FOXA2-1 502 bp overlap

GATA4 2 datasets

ChIP DE DE-GATA4-1 505 bp overlap

ChIP DE DE-GATA4-2 558 bp overlap

GATA6 3 datasets

ChIP DE DE-GATA6-1 557 bp overlap

ChIP DE DE-GATA6-2 560 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 415 bp overlap

Motif DE_72h DE_72h-GFI1_MA0038.3 11 bp overlap

Gfi1B 1 dataset

Motif DE_72h DE_72h-Gfi1B_MA0483.2 10 bp overlap

HOXB13 2 datasets

Motif DE_60h DE_60h-HOXB13_MA0901.3 9 bp overlap

Motif DE_72h DE_72h-HOXB13_MA0901.3 9 bp overlap

Hoxa13 2 datasets

Motif DE_60h DE_60h-Hoxa13_MA0650.4 8 bp overlap

Motif DE_72h DE_72h-Hoxa13_MA0650.4 8 bp overlap

ChIP K-562 ENCSR005NMT.ID3.K-562 139 bp overlap

ChIP K562 ENCFF170RNI 147 bp overlap

Motif DE_72h DE_72h-JUN_MA0488.2 10 bp overlap

ChIP DE_D2 S02-DE-d2-JUN-exp1 364 bp overlap

KLF1 2 datasets

Motif DE_60h DE_60h-KLF1_MA0493.3 8 bp overlap

Motif DE_72h DE_72h-KLF1_MA0493.3 8 bp overlap

KLF10 2 datasets

Motif DE_60h DE_60h-KLF10_MA1511.2 9 bp overlap

Motif DE_72h DE_72h-KLF10_MA1511.2 9 bp overlap

KLF11 2 datasets

Motif DE_60h DE_60h-KLF11_MA1512.2 10 bp overlap

Motif DE_72h DE_72h-KLF11_MA1512.2 10 bp overlap

KLF12 2 datasets

Motif DE_60h DE_60h-KLF12_MA0742.2 9 bp overlap

Motif DE_72h DE_72h-KLF12_MA0742.2 9 bp overlap

KLF14 2 datasets

Motif DE_60h DE_60h-KLF14_MA0740.2 9 bp overlap

Motif DE_72h DE_72h-KLF14_MA0740.2 9 bp overlap

KLF15 2 datasets

Motif DE_60h DE_60h-KLF15_MA1513.2 8 bp overlap

Motif DE_72h DE_72h-KLF15_MA1513.2 8 bp overlap

KLF16 2 datasets

Motif DE_60h DE_60h-KLF16_MA0741.1 11 bp overlap

Motif DE_72h DE_72h-KLF16_MA0741.1 11 bp overlap

KLF2 2 datasets

Motif DE_60h DE_60h-KLF2_MA1515.2 8 bp overlap

Motif DE_72h DE_72h-KLF2_MA1515.2 8 bp overlap

KLF4 2 datasets

Motif DE_60h DE_60h-KLF4_MA0039.5 8 bp overlap

Motif DE_72h DE_72h-KLF4_MA0039.5 8 bp overlap

KLF5 2 datasets

Motif DE_60h DE_60h-KLF5_MA0599.1 10 bp overlap

Motif DE_72h DE_72h-KLF5_MA0599.1 10 bp overlap

KLF7 2 datasets

Motif DE_60h DE_60h-KLF7_MA1959.2 8 bp overlap

Motif DE_72h DE_72h-KLF7_MA1959.2 8 bp overlap

Motif DE_72h DE_72h-MAFF_MA0495.4 11 bp overlap

ChIP HepG2 ENCFF507HCX 458 bp overlap

ChIP WTC11 ENCFF223QFY 437 bp overlap

MEIS1 2 datasets

Motif DE_72h DE_72h-MEIS1_MA0498.3 5 bp overlap

Motif DE_72h DE_72h-MEIS1_MA0498.3 5 bp overlap

Motif DE_72h DE_72h-Mafb_MA0117.3 11 bp overlap

NANOG 1 dataset

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 222 bp overlap

NFATC3 2 datasets

Motif DE_60h DE_60h-NFATC3_MA0625.3 6 bp overlap

Motif DE_72h DE_72h-NFATC3_MA0625.3 6 bp overlap

NFATC4 2 datasets

Motif DE_60h DE_60h-NFATC4_MA1525.3 9 bp overlap

Motif DE_72h DE_72h-NFATC4_MA1525.3 9 bp overlap

NR1D1 1 dataset

Motif DE_72h DE_72h-NR1D1_MA1531.2 14 bp overlap

NR2C1 1 dataset

Motif DE_72h DE_72h-NR2C1_MA1535.2 6 bp overlap

NR2C2 1 dataset

Motif DE_72h DE_72h-NR2C2_MA1536.2 6 bp overlap

NR2F1 1 dataset

Motif DE_72h DE_72h-NR2F1_MA0017.3 12 bp overlap

NR2F2 1 dataset

Motif DE_72h DE_72h-NR2F2_MA1111.2 7 bp overlap

Motif DE_72h DE_72h-NRL_MA0842.3 12 bp overlap

Nfat5 2 datasets

Motif DE_60h DE_60h-Nfat5_MA0606.3 8 bp overlap

Motif DE_72h DE_72h-Nfat5_MA0606.3 8 bp overlap

Nfatc1 2 datasets

Motif DE_60h DE_60h-Nfatc1_MA0624.3 6 bp overlap

Motif DE_72h DE_72h-Nfatc1_MA0624.3 6 bp overlap

Nfatc2 2 datasets

Motif DE_60h DE_60h-Nfatc2_MA0152.3 8 bp overlap

Motif DE_72h DE_72h-Nfatc2_MA0152.3 8 bp overlap

Nr1H2 1 dataset

Motif DE_72h DE_72h-Nr1H2_MA1996.2 6 bp overlap

Nr1H4 1 dataset

Motif DE_72h DE_72h-Nr1H4_MA1110.3 6 bp overlap

Nr1h3 1 dataset

Motif DE_72h DE_72h-Nr1h3_MA2337.1 6 bp overlap

Nr2F6 1 dataset

Motif DE_72h DE_72h-Nr2F6_MA0728.1 15 bp overlap

Nr5A2 1 dataset

Motif DE_72h DE_72h-Nr5A2_MA0505.3 9 bp overlap

ONECUT1 1 dataset

ChIP HepG2 ENCFF243FIR 341 bp overlap

PATZ1 2 datasets

Motif DE_60h DE_60h-PATZ1_MA1961.2 11 bp overlap

Motif DE_72h DE_72h-PATZ1_MA1961.2 11 bp overlap

POLR2A 7 datasets

ChIP GM23338 ENCFF450WCS 472 bp overlap

ChIP GM23338 ENCFF450WCS 408 bp overlap

ChIP H1 ENCFF566JSR 530 bp overlap

ChIP H1 ENCFF566JSR 557 bp overlap

ChIP H1 ENCFF770YBQ 411 bp overlap

ChIP H1 ENCFF833NJP 406 bp overlap

ChIP H1 ENCFF833NJP 411 bp overlap

Ppara 1 dataset

Motif DE_72h DE_72h-Ppara_MA2338.1 7 bp overlap

Motif DE_72h DE_72h-RARA_MA0729.1 18 bp overlap

RBFOX2 2 datasets

ChIP K-562 GSE120104.RBFOX2.K-562 148 bp overlap

ChIP K-562 GSE120104.RBFOX2.K-562 77 bp overlap

Motif DE_72h DE_72h-RORA_MA0071.1 10 bp overlap

Motif DE_72h DE_72h-Rarb_MA0857.1 16 bp overlap

Motif DE_72h DE_72h-Rarg_MA0859.2 15 bp overlap

SMAD2_3 1 dataset

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 309 bp overlap

SOX13 1 dataset

Motif DE_72h DE_72h-SOX13_MA1120.2 7 bp overlap

SOX17 1 dataset

ChIP DE_D2 DED2-SOX17_Batch_II 270 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 513 bp overlap

Motif DE_72h DE_72h-SOX2_MA0143.5 7 bp overlap

Motif DE_60h DE_60h-SP1_MA0079.5 9 bp overlap

Motif DE_72h DE_72h-SP1_MA0079.5 9 bp overlap

ChIP H1 ENCFF263FUH 321 bp overlap

Motif DE_60h DE_60h-SP2_MA0516.3 9 bp overlap

Motif DE_72h DE_72h-SP2_MA0516.3 9 bp overlap

Motif DE_60h DE_60h-SP3_MA0746.3 11 bp overlap

Motif DE_72h DE_72h-SP3_MA0746.3 11 bp overlap

Motif DE_60h DE_60h-SP4_MA0685.2 9 bp overlap

Motif DE_72h DE_72h-SP4_MA0685.2 9 bp overlap

Motif DE_72h DE_72h-SP5_MA1965.2 6 bp overlap

Motif DE_60h DE_60h-SP9_MA1564.2 10 bp overlap

Motif DE_72h DE_72h-SP9_MA1564.2 10 bp overlap

SSRP1 1 dataset

ChIP HepG2 ENCFF540BLL 420 bp overlap

STAT1_pS727 2 datasets

ChIP SET-2 GSE100566.STAT1_pS727.SET-2 169 bp overlap

ChIP SET-2 GSE100566.STAT1_pS727.SET-2 191 bp overlap

SUPT5H 3 datasets

ChIP DLD-1_NELFCD-AID GSE144786.SUPT5H.DLD-1_NELFCD-AID 183 bp overlap

ChIP DLD-1_NELFCD-AID GSE144786.SUPT5H.DLD-1_NELFCD-AID 69 bp overlap

ChIP K562 ENCFF902PAW 389 bp overlap

Sox17 1 dataset

Motif DE_72h DE_72h-Sox17_MA0078.3 10 bp overlap

Motif DE_72h DE_72h-Sox3_MA0514.3 7 bp overlap

Sox6 2 datasets

Motif DE_60h DE_60h-Sox6_MA0515.1 10 bp overlap

Motif DE_72h DE_72h-Sox6_MA0515.1 10 bp overlap

TAF1 3 datasets

ChIP H1 ENCFF478SZO 466 bp overlap

ChIP H1 ENCFF478SZO 484 bp overlap

ChIP WA01 ENCSR000BHO.TAF1.WA01 129 bp overlap

Motif DE_60h DE_60h-TBP_MA0108.3 7 bp overlap

Motif DE_72h DE_72h-TBP_MA0108.3 7 bp overlap

ChIP H1 ENCFF859IIO 377 bp overlap

Motif DE_72h DE_72h-TBR1_MA0802.2 9 bp overlap

TBX15 1 dataset

Motif DE_72h DE_72h-TBX15_MA0803.1 8 bp overlap

Motif DE_72h DE_72h-TBX4_MA0806.1 8 bp overlap

TEAD1 3 datasets

Motif DE_72h DE_72h-TEAD1_MA0090.4 9 bp overlap

Motif DE_72h DE_72h-TEAD1_MA0090.4 9 bp overlap

ChIP WTC11 ENCFF502QUV 405 bp overlap

TEAD2 2 datasets

Motif DE_72h DE_72h-TEAD2_MA1121.2 7 bp overlap

Motif DE_72h DE_72h-TEAD2_MA1121.2 7 bp overlap

TEAD3 2 datasets

Motif DE_72h DE_72h-TEAD3_MA0808.1 8 bp overlap

Motif DE_72h DE_72h-TEAD3_MA0808.1 8 bp overlap

TEAD4 2 datasets

Motif DE_72h DE_72h-TEAD4_MA0809.3 8 bp overlap

Motif DE_72h DE_72h-TEAD4_MA0809.3 8 bp overlap

ChIP WA01 ENCSR000BKD.YY1.WA01 131 bp overlap

ZBTB32 2 datasets

Motif DE_60h DE_60h-ZBTB32_MA1580.1 10 bp overlap

Motif DE_72h DE_72h-ZBTB32_MA1580.1 10 bp overlap

ZFP14 1 dataset

Motif DE_72h DE_72h-ZFP14_MA1972.1 15 bp overlap

ZNF135 1 dataset

Motif DE_72h DE_72h-ZNF135_MA1587.1 14 bp overlap

ZNF148 2 datasets

Motif DE_60h DE_60h-ZNF148_MA1653.2 10 bp overlap

Motif DE_72h DE_72h-ZNF148_MA1653.2 10 bp overlap

ZNF16 2 datasets

Motif DE_60h DE_60h-ZNF16_MA1654.2 21 bp overlap

Motif DE_72h DE_72h-ZNF16_MA1654.2 21 bp overlap

ZNF184 1 dataset

ChIP HEK293 ENCSR020UPN.ZNF184.HEK293 58 bp overlap

ZNF257 1 dataset

Motif DE_72h DE_72h-ZNF257_MA1710.2 10 bp overlap

ZNF460 2 datasets

Motif DE_72h DE_72h-ZNF460_MA1596.1 16 bp overlap

Motif DE_72h DE_72h-ZNF460_MA1596.1 16 bp overlap

ZNF550 1 dataset

ChIP Hep-G2 ENCSR198BHH.ZNF550.Hep-G2 154 bp overlap

ZNF684 1 dataset

Motif DE_72h DE_72h-ZNF684_MA1600.2 14 bp overlap

ZNF687 2 datasets

ChIP HepG2 ENCFF653WIX 500 bp overlap

ChIP HepG2 ENCFF653WIX 699 bp overlap