chr17 : 4,745,640 – 4,745,967
327 bp 87 TFs 1 linked gene
This 327 bp open chromatin element is linked to CXCL16 and is bound by 87 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
CXCL16 5.7 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr17:4,740,640 – 4,750,967
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
87 transcription factors
Source
Cell type
ARNTL 1 dataset
ChIP NSC_hNP1 GSE134972.ARNTL.NSC_hNP1 235 bp overlap
BCOR 2 datasets
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 327 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 327 bp overlap
BRD2 1 dataset
ChIP NCI-H23 GSE104481.BRD2.NCI-H23 124 bp overlap
BRD4 7 datasets
ChIP CLL_patient1_4h_CpG GSE109411.BRD4.CLL_patient1_4h_CpG 189 bp overlap
ChIP CLL_patient2_4h_CpG_BET GSE109411.BRD4.CLL_patient2_4h_CpG_BET 298 bp overlap
ChIP MCF-10A ERP003925.BRD4.MCF-10A 188 bp overlap
ChIP MDA-MB-157 ERP003925.BRD4.MDA-MB-157 287 bp overlap
ChIP hESC GSE33281.BRD4.hESC 86 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 327 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 241 bp overlap
CBFB 1 dataset
ChIP ME-1 GSE46044.CBFB.ME-1 196 bp overlap
CTCF 6 datasets
ChIP H9 ENCFF152GTF 81 bp overlap
ChIP brain ENCFF163BBN 127 bp overlap
ChIP hiPSC_IB7 GSE106870.CTCF.hiPSC_IB7 130 bp overlap
ChIP hiPSC_IIA11 GSE106870.CTCF.hiPSC_IIA11 152 bp overlap
ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 156 bp overlap
ChIP keratinocyte GSE154221.CTCF.keratinocyte 280 bp overlap
CTCFL 1 dataset
Motif DE_24h DE_24h-CTCFL_MA1102.3 8 bp overlap
EBF1 1 dataset
Motif DE_24h DE_24h-EBF1_MA0154.5 11 bp overlap
EP300 1 dataset
ChIP osteoblast ENCSR000AUD.EP300.osteoblast 327 bp overlap
ERG 2 datasets
ChIP CD34_NR29 GSE23730.ERG.CD34_NR29 298 bp overlap
ChIP MCF-7 GSE23730.ERG.MCF-7 204 bp overlap
ESR1 3 datasets
ChIP Ishikawa GSE99905.ESR1.Ishikawa 207 bp overlap
ChIP MCF-7_PaPE-1 GSE93510.ESR1.MCF-7_PaPE-1 104 bp overlap
ChIP MDA-MB-231_LQ_45min GSE95121.ESR1.MDA-MB-231_LQ_45min 164 bp overlap
EZH2 12 datasets
ChIP H1 ENCFF232NZA 139 bp overlap
ChIP WA01 ENCSR000ASY.EZH2.WA01 208 bp overlap
ChIP astrocyte ENCFF365JTP 243 bp overlap
ChIP astrocyte ENCFF365JTP 327 bp overlap
ChIP astrocyte ENCSR000ARR.EZH2.astrocyte 327 bp overlap
ChIP fibroblast of dermis ENCFF029VZK 327 bp overlap
ChIP fibroblast_DERMAL ENCSR000ASE.EZH2.fibroblast_DERMAL 327 bp overlap
ChIP hESC GSE113817.EZH2.hESC 235 bp overlap
ChIP myotube ENCSR000ASZ.EZH2.myotube 227 bp overlap
ChIP neural progenitor cell ENCFF472NFV 125 bp overlap
ChIP neural progenitor cell ENCFF472NFV 327 bp overlap
ChIP neural_progenitor ENCSR069DPL.EZH2.neural_progenitor 327 bp overlap
FLI1 1 dataset
ChIP UAE_ZINC GSE23730.FLI1.UAE_ZINC 281 bp overlap
FOXA2 1 dataset
ChIP BJ1-hTERT_FoxHnf1aCoExp GSE90454.FOXA2.BJ1-hTERT_FoxHnf1aCoExp 279 bp overlap
FOXP1 1 dataset
ChIP H9 GSE31006.FOXP1.H9 51 bp overlap
GATA3 1 dataset
ChIP breast_tumor_Male_16 GSE104399.GATA3.breast_tumor_Male_16 115 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 327 bp overlap
HDAC2 1 dataset
ChIP H1 ENCFF353UJQ 108 bp overlap
HEXIM1 1 dataset
ChIP HCT-116 GSE72622.HEXIM1.HCT-116 281 bp overlap
HNRNPK 5 datasets
ChIP Hep-G2 GSE120104.HNRNPK.Hep-G2 283 bp overlap
ChIP Hep-G2 ENCSR519QAA.HNRNPK.Hep-G2 271 bp overlap
ChIP K-562 GSE120104.HNRNPK.K-562 205 bp overlap
ChIP K-562 ENCSR014RCS.HNRNPK.K-562 203 bp overlap
ChIP K562 ENCFF954RNO 327 bp overlap
HOXB13 2 datasets
ChIP prostate-cancer_PDX_141 GSE130408.HOXB13.prostate-cancer_PDX_141 91 bp overlap
ChIP prostate_P19 GSE130408.HOXB13.prostate_P19 64 bp overlap
JARID2 2 datasets
ChIP MRC-5_IPS25_CTR GSE48515.JARID2.MRC-5_IPS25_CTR 192 bp overlap
ChIP MRC-5_IPS25_MEG3 GSE48515.JARID2.MRC-5_IPS25_MEG3 253 bp overlap
JUN 2 datasets
ChIP 786-O GSE86092.JUN.786-O 141 bp overlap
ChIP MCF-7_BD610326 GSE128445.JUN.MCF-7_BD610326 327 bp overlap
KDM4A 4 datasets
ChIP WA01 ENCSR000AVC.KDM4A.WA01 327 bp overlap
ChIP hiPSC_IA12 GSE106870.KDM4A.hiPSC_IA12 308 bp overlap
ChIP hiPSC_IIA11 GSE106870.KDM4A.hiPSC_IIA11 275 bp overlap
ChIP hiPSC_IID12 GSE106870.KDM4A.hiPSC_IID12 327 bp overlap
KLF1 4 datasets
Motif DE_24h DE_24h-KLF1_MA0493.3 8 bp overlap
ChIP HEK293 ENCFF159QSW 123 bp overlap
ChIP HEK293 ENCSR859BMR.KLF1.HEK293 327 bp overlap
ChIP HEK293 GSE76494.KLF1.HEK293 323 bp overlap
KLF10 3 datasets
Motif DE_24h DE_24h-KLF10_MA1511.2 9 bp overlap
Motif DE_24h DE_24h-KLF10_MA1511.2 9 bp overlap
Motif DE_24h DE_24h-KLF10_MA1511.2 9 bp overlap
KLF11 1 dataset
Motif DE_24h DE_24h-KLF11_MA1512.2 10 bp overlap
KLF12 2 datasets
Motif DE_24h DE_24h-KLF12_MA0742.2 9 bp overlap
Motif DE_24h DE_24h-KLF12_MA0742.2 9 bp overlap
KLF13 1 dataset
Motif DE_24h DE_24h-KLF13_MA0657.2 17 bp overlap
KLF14 2 datasets
Motif DE_24h DE_24h-KLF14_MA0740.2 9 bp overlap
Motif DE_24h DE_24h-KLF14_MA0740.2 9 bp overlap
KLF15 2 datasets
Motif DE_24h DE_24h-KLF15_MA1513.2 8 bp overlap
Motif DE_24h DE_24h-KLF15_MA1513.2 8 bp overlap
KLF16 1 dataset
Motif DE_24h DE_24h-KLF16_MA0741.1 11 bp overlap
KLF2 1 dataset
Motif DE_24h DE_24h-KLF2_MA1515.2 8 bp overlap
KLF3 1 dataset
Motif DE_24h DE_24h-KLF3_MA1516.2 10 bp overlap
KLF4 1 dataset
Motif DE_24h DE_24h-KLF4_MA0039.5 8 bp overlap
KLF5 2 datasets
Motif DE_24h DE_24h-KLF5_MA0599.1 10 bp overlap
Motif DE_24h DE_24h-KLF5_MA0599.1 10 bp overlap
KLF7 1 dataset
Motif DE_24h DE_24h-KLF7_MA1959.2 8 bp overlap
KLF9 2 datasets
Motif DE_24h DE_24h-KLF9_MA1107.3 11 bp overlap
ChIP GBM1A GSE62211.KLF9.GBM1A 101 bp overlap
MAF1 1 dataset
ChIP THP-1_macrophage_PMA GSE96800.MAF1.THP-1_macrophage_PMA 290 bp overlap
NCAPH2 1 dataset
ChIP HEK293 GSE97540.NCAPH2.HEK293 327 bp overlap
NFKB1 1 dataset
ChIP HEK293T_2KR GSE129618.NFKB1.HEK293T_2KR 283 bp overlap
NR2F2 1 dataset
ChIP MCF-7_E2 GSE132432.NR2F2.MCF-7_E2 303 bp overlap
OGG1 3 datasets
ChIP HEK293 GSE89017.OGG1.HEK293 327 bp overlap
ChIP HEK293_15min GSE89017.OGG1.HEK293_15min 327 bp overlap
ChIP HEK293_60_min GSE89017.OGG1.HEK293_60_min 327 bp overlap
PATZ1 2 datasets
Motif DE_24h DE_24h-PATZ1_MA1961.2 11 bp overlap
Motif DE_24h DE_24h-PATZ1_MA1961.2 11 bp overlap
PCBP1 4 datasets
ChIP Hep-G2 ENCSR872EVQ.PCBP1.Hep-G2 171 bp overlap
ChIP Hep-G2 GSE120104.PCBP1.Hep-G2 209 bp overlap
ChIP K-562 ENCSR052PTN.PCBP1.K-562 239 bp overlap
ChIP K-562 GSE120104.PCBP1.K-562 250 bp overlap
PCGF1 1 dataset
ChIP WA01 GSE104690.PCGF1.WA01 327 bp overlap
PHF8 1 dataset
ChIP WA01 ENCSR000ATK.PHF8.WA01 134 bp overlap
PLAG1 2 datasets
Motif DE_24h DE_24h-PLAG1_MA0163.1 14 bp overlap
ChIP K-562 GSE111469.PLAG1.K-562 147 bp overlap
POLR2A 1 dataset
ChIP GM23338 ENCFF450WCS 253 bp overlap
POU5F1 4 datasets
ChIP BJ1-hTERT GSE92491.POU5F1.BJ1-hTERT 106 bp overlap
ChIP DE_D1 DED1-OCT4_Batch_II 327 bp overlap
ChIP SKM-1 GSE93706.POU5F1.SKM-1 207 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 270 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 230 bp overlap
PRDM14 1 dataset
ChIP NCCIT GSE71675.PRDM14.NCCIT 247 bp overlap
RBBP5 2 datasets
ChIP H1 ENCFF905HFL 192 bp overlap
ChIP H1 ENCFF905HFL 327 bp overlap
RBM39 2 datasets
ChIP Hep-G2 GSE120104.RBM39.Hep-G2 70 bp overlap
ChIP Hep-G2 ENCSR339JTP.RBM39.Hep-G2 61 bp overlap
RORC 2 datasets
ChIP HCC70 GSE126380.RORC.HCC70 327 bp overlap
ChIP HCC70_XY018 GSE126380.RORC.HCC70_XY018 327 bp overlap
RYBP 1 dataset
ChIP WA01 GSE104690.RYBP.WA01 327 bp overlap
SIN3A 2 datasets
ChIP hiPSC_IA12 GSE106870.SIN3A.hiPSC_IA12 205 bp overlap
ChIP hiPSC_IB12 GSE106870.SIN3A.hiPSC_IB12 327 bp overlap
SIRT6 1 dataset
ChIP SK-MEL-239_L-C-B GSE102813.SIRT6.SK-MEL-239_L-C-B 205 bp overlap
SMARCC1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 164 bp overlap
SP1 4 datasets
Motif DE_24h DE_24h-SP1_MA0079.5 9 bp overlap
Motif DE_24h DE_24h-SP1_MA0079.5 9 bp overlap
Motif DE_24h DE_24h-SP1_MA0079.5 9 bp overlap
ChIP HEK293 GSE76494.SP1.HEK293 86 bp overlap
SP2 2 datasets
Motif DE_24h DE_24h-SP2_MA0516.3 9 bp overlap
Motif DE_24h DE_24h-SP2_MA0516.3 9 bp overlap
SP3 1 dataset
Motif DE_24h DE_24h-SP3_MA0746.3 11 bp overlap
SP4 2 datasets
Motif DE_24h DE_24h-SP4_MA0685.2 9 bp overlap
ChIP HEK293 GSE76494.SP4.HEK293 127 bp overlap
SP8 1 dataset
Motif DE_24h DE_24h-SP8_MA0747.2 11 bp overlap
SP9 1 dataset
Motif DE_24h DE_24h-SP9_MA1564.2 10 bp overlap
SREBP2 2 datasets
ChIP HCC70 GSE126380.SREBP2.HCC70 327 bp overlap
ChIP HCC70_XY018 GSE126380.SREBP2.HCC70_XY018 327 bp overlap
STAT3 1 dataset
ChIP WA01 ERP004237.STAT3.WA01 308 bp overlap
TFAP2C 2 datasets
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 245 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 327 bp overlap
TFDP1 1 dataset
Motif DE_24h DE_24h-TFDP1_MA1122.2 8 bp overlap
TFIIIC 1 dataset
ChIP HEK293 GSE119418.TFIIIC.HEK293 327 bp overlap
TP63 1 dataset
ChIP keratinocyte_diff GSE33571.TP63.keratinocyte_diff 281 bp overlap
TRIM24 1 dataset
ChIP LNCaP-abl_ETOH GSE69331.TRIM24.LNCaP-abl_ETOH 196 bp overlap
TRIM25 1 dataset
ChIP BT-549 GSE79588.TRIM25.BT-549 327 bp overlap
TRIM28 1 dataset
ChIP HCT-116 GSE72622.TRIM28.HCT-116 258 bp overlap
WDR5 1 dataset
ChIP SMMC-7721 GSE126982.WDR5.SMMC-7721 327 bp overlap
YY1 1 dataset
ChIP Huh-7 GSE97411.YY1.Huh-7 227 bp overlap
ZBED4 1 dataset
Motif DE_24h DE_24h-ZBED4_MA2328.1 10 bp overlap
ZBTB48 3 datasets
ChIP HEK293 ENCFF809BPK 235 bp overlap
ChIP HEK293 ENCFF809BPK 327 bp overlap
ChIP HEK293 ENCSR781EQJ.ZBTB48.HEK293 271 bp overlap
ZBTB7A 1 dataset
ChIP K-562 ENCSR000BME.ZBTB7A.K-562 216 bp overlap
ZFP69B 1 dataset
ChIP HEK293 ENCSR381VYR.ZFP69B.HEK293 97 bp overlap
ZNF148 1 dataset
Motif DE_24h DE_24h-ZNF148_MA1653.2 10 bp overlap
ZNF207 1 dataset
ChIP WA09 GSE118632.ZNF207.WA09 242 bp overlap
ZNF281 1 dataset
Motif DE_24h DE_24h-ZNF281_MA1630.3 10 bp overlap
ZNF423 1 dataset
ChIP WTC11 ENCFF574PBR 212 bp overlap
ZNF445 1 dataset
ChIP HEK293T GSE78099.ZNF445.HEK293T 242 bp overlap
ZNF669 1 dataset
Motif DE_24h DE_24h-ZNF669_MA1985.1 15 bp overlap
ZNF692 1 dataset
ChIP HEK293 ENCFF040AZE 327 bp overlap
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