chr16 : 48,053,376 48,053,654
278 bp 79 TFs 1 linked gene
This 278 bp open chromatin element is linked to ENSG00000288026 and is bound by 79 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
ENSG00000288026 1.4 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr16:48,048,376 – 48,058,654
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
79 transcription factors
Source
Cell type
AR 4 datasets
ChIP LNCaP_SHCTR_DHT GSE62492.AR.LNCaP_SHCTR_DHT 54 bp overlap
ChIP MDA-MB-453_FOXA1 ERP003503.AR.MDA-MB-453_FOXA1 206 bp overlap
ChIP VCaP_DHT24H_SHFOXA1 GSE58428.AR.VCaP_DHT24H_SHFOXA1 56 bp overlap
ChIP VCaP_DHT24H_SHRUNX1 GSE58428.AR.VCaP_DHT24H_SHRUNX1 81 bp overlap
ARID1A 2 datasets
ChIP 12Z GSE129781.ARID1A.12Z 278 bp overlap
ChIP MCF-7_4-hydroxytamoxifen GSE123284.ARID1A.MCF-7_4-hydroxytamoxifen 245 bp overlap
ASH2L 1 dataset
ChIP H1 ENCFF399KAM 278 bp overlap
BCOR 2 datasets
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 240 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 246 bp overlap
BRD2 5 datasets
ChIP HCC1806_BAZ2B_JQ1 GSE116879.BRD2.HCC1806_BAZ2B_JQ1 167 bp overlap
ChIP HCC1806_BAZ2BsiRNA GSE116879.BRD2.HCC1806_BAZ2BsiRNA 278 bp overlap
ChIP HCC1806_NTsiRNA GSE116879.BRD2.HCC1806_NTsiRNA 278 bp overlap
ChIP SK-MEL-147 GSE94488.BRD2.SK-MEL-147 256 bp overlap
ChIP SK-MEL-147_JQ1 GSE94488.BRD2.SK-MEL-147_JQ1 185 bp overlap
BRD4 5 datasets
ChIP CHL-1 GSE95585.BRD4.CHL-1 263 bp overlap
ChIP HCC1395 GSE63581.BRD4.HCC1395 278 bp overlap
ChIP MDA-MB-231_JQ1_MGSK2801 GSE116879.BRD4.MDA-MB-231_JQ1_MGSK2801 246 bp overlap
ChIP MDA-MB-231_JQ1_MGSK2801_rDNA GSE116879.BRD4.MDA-MB-231_JQ1_MGSK2801_rDNA 246 bp overlap
ChIP cortical-interneuron_KCl-pos GSE117508.BRD4.cortical-interneuron_KCl-pos 141 bp overlap
BRD9 1 dataset
ChIP MDA-MB-231_JQ1_MGSK2801 GSE116879.BRD9.MDA-MB-231_JQ1_MGSK2801 240 bp overlap
CDKN1B 1 dataset
ChIP MDA-MB-231 GSE112444.CDKN1B.MDA-MB-231 187 bp overlap
CEBPA 1 dataset
ChIP T-47D_siCtrl GSE132649.CEBPA.T-47D_siCtrl 138 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 223 bp overlap
CREBBP 1 dataset
ChIP MCF-7 ERP000901.CREBBP.MCF-7 132 bp overlap
CTCF 19 datasets
ChIP BJ ENCFF434HEC 254 bp overlap
ChIP BJ ENCSR000DQI.CTCF.BJ 134 bp overlap
ChIP D54 ENCSR000DKN.CTCF.D54 136 bp overlap
ChIP FT282 GSE131931.CTCF.FT282 160 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_2 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_2 206 bp overlap
ChIP OVCAR-8 GSE70764.CTCF.OVCAR-8 182 bp overlap
ChIP RWPE-2 ENCSR856JJB.CTCF.RWPE-2 278 bp overlap
ChIP cardiac_muscle ENCSR000DTI.CTCF.cardiac_muscle 182 bp overlap
ChIP chondrocyte ENCFF134ORZ 278 bp overlap
ChIP choroid-plexus_epithelial ENCSR000DTL.CTCF.choroid-plexus_epithelial 133 bp overlap
ChIP endothelial_brain-microvascular ENCSR000DTA.CTCF.endothelial_brain-microvascular 163 bp overlap
ChIP epithelial_kidney ENCSR000DVH.CTCF.epithelial_kidney 130 bp overlap
ChIP fibroblast of the aortic adventitia ENCFF639DMR 182 bp overlap
ChIP fibroblast_PULMONARY_ARTERY ENCSR000DUX.CTCF.fibroblast_PULMONARY_ARTERY 144 bp overlap
ChIP fibroblast_VILLOUS_MESENCHYME ENCSR000DVQ.CTCF.fibroblast_VILLOUS_MESENCHYME 145 bp overlap
ChIP keratinocyte GSE154221.CTCF.keratinocyte 278 bp overlap
ChIP keratinocyte ENCSR000DNC.CTCF.keratinocyte 163 bp overlap
ChIP primary-glioblastoma_G523 GSE121601.CTCF.primary-glioblastoma_G523 188 bp overlap
ChIP primary-glioblastoma_G583 GSE121601.CTCF.primary-glioblastoma_G583 195 bp overlap
Cebpa 2 datasets
ChIP BLaER1 ENCFF093OYK 95 bp overlap
ChIP BLaER1 ENCFF364PUR 85 bp overlap
E2F6 1 dataset
ChIP WA01 ENCSR000BSI.E2F6.WA01 201 bp overlap
ELL2 1 dataset
ChIP HeLa GSE40632.ELL2.HeLa 150 bp overlap
EP300 4 datasets
ChIP T-47D ENCSR000BLM.EP300.T-47D 184 bp overlap
ChIP neural ENCSR843ZUP.EP300.neural 124 bp overlap
ChIP neural cell ENCFF442QNK 272 bp overlap
ChIP neural cell ENCFF442QNK 278 bp overlap
ESR1 6 datasets
ChIP MCF-7_D538G_DMSO GSE148277.ESR1.MCF-7_D538G_DMSO 231 bp overlap
ChIP MCF-7_Veh GSE67295.ESR1.MCF-7_Veh 159 bp overlap
ChIP MCF-7_jc5849 GSE126004.ESR1.MCF-7_jc5849 189 bp overlap
ChIP T-47D_D538G GSE148277.ESR1.T-47D_D538G 212 bp overlap
ChIP T-47D_D538G_E2 GSE148277.ESR1.T-47D_D538G_E2 234 bp overlap
ChIP T-47D_Y537S_E2 GSE148277.ESR1.T-47D_Y537S_E2 220 bp overlap
FOSL1 1 dataset
ChIP BT-549 GSE112961.FOSL1.BT-549 170 bp overlap
GATA2 2 datasets
ChIP ESF GSE108408.GATA2.ESF 205 bp overlap
ChIP primary-endometrial-stromal-cell_IVD_P2 GSE145673.GATA2.primary-endometrial-stromal-cell_IVD_P2 182 bp overlap
GATA3 1 dataset
ChIP T-47D ENCSR000BMX.GATA3.T-47D 214 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 258 bp overlap
ChIP DE DE-GATA4-2 264 bp overlap
ChIP foregut GSE117136.GATA4.foregut 263 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 245 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 228 bp overlap
GATA6 8 datasets
ChIP DE DE-GATA6-1 230 bp overlap
ChIP DE DE-GATA6-2 278 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 252 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 278 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 278 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 278 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 278 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 278 bp overlap
GRHL2 5 datasets
ChIP MCF-7-WS8_VEH GSE113092.GRHL2.MCF-7-WS8_VEH 269 bp overlap
ChIP MCF-7_E2_45min GSE109820.GRHL2.MCF-7_E2_45min 168 bp overlap
ChIP OVCA429 GSE71018.GRHL2.OVCA429 189 bp overlap
ChIP PEO1 GSE71018.GRHL2.PEO1 201 bp overlap
ChIP T-47D GSE99680.GRHL2.T-47D 248 bp overlap
HDAC1 1 dataset
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.HDAC1.MCF-7_parental_4-hydroxytamoxifen 213 bp overlap
HDAC2 1 dataset
ChIP RH4_Entinostat-6H GSE116344.HDAC2.RH4_Entinostat-6H 95 bp overlap
HIF1A 1 dataset
ChIP BEAS-2B GSE145834.HIF1A.BEAS-2B 231 bp overlap
HNF4A 1 dataset
ChIP Caco-2_DIFF GSE23436.HNF4A.Caco-2_DIFF 137 bp overlap
IRF2 1 dataset
Motif DE_60h DE_60h-IRF2_MA0051.2 16 bp overlap
JUN 1 dataset
ChIP MDA-MB-231 GSE112444.JUN.MDA-MB-231 229 bp overlap
KDM5B 2 datasets
ChIP HCC2157 GSE46055.KDM5B.HCC2157 170 bp overlap
ChIP SUM185_SHCTCF GSE46055.KDM5B.SUM185_SHCTCF 114 bp overlap
KLF17 1 dataset
Motif DE_60h DE_60h-KLF17_MA1514.2 14 bp overlap
MAFK 1 dataset
ChIP H1 ENCFF854XWE 146 bp overlap
MAX 1 dataset
ChIP MCF-7 ENCSR000BUL.MAX.MCF-7 156 bp overlap
MAZ 2 datasets
ChIP IMR-90 ENCFF682IKN 278 bp overlap
ChIP IMR-90 ENCSR000EFF.MAZ.IMR-90 131 bp overlap
MED1 4 datasets
ChIP hMSC-TERT4_4h GSE104537.MED1.hMSC-TERT4_4h 242 bp overlap
ChIP hMSC-TERT4_D14 GSE104537.MED1.hMSC-TERT4_D14 140 bp overlap
ChIP hMSC-TERT4_D7 GSE104537.MED1.hMSC-TERT4_D7 251 bp overlap
ChIP hMSC-TERT4_osteoblast-D3 GSE113253.MED1.hMSC-TERT4_osteoblast-D3 204 bp overlap
MITF 1 dataset
ChIP melanocyte_CTR GSE50681.MITF.melanocyte_CTR 250 bp overlap
MXI1 2 datasets
ChIP IMR-90 ENCFF040YVH 225 bp overlap
ChIP IMR-90 ENCSR000EFE.MXI1.IMR-90 137 bp overlap
MYCN 1 dataset
ChIP SHEP-21N GSE80151.MYCN.SHEP-21N 204 bp overlap
NANOG 2 datasets
ChIP WA01 ENCSR000BMT.NANOG.WA01 120 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 172 bp overlap
NEUROG2 3 datasets
ChIP MRC-5_NFD_1DPT GSE75910.NEUROG2.MRC-5_NFD_1DPT 173 bp overlap
ChIP MRC-5_N_02DPT GSE75910.NEUROG2.MRC-5_N_02DPT 218 bp overlap
ChIP MRC-5_N_1DPT GSE75910.NEUROG2.MRC-5_N_1DPT 247 bp overlap
NKX2-1 1 dataset
ChIP NCI-H1819 GSE39998.NKX2-1.NCI-H1819 165 bp overlap
NR2F2 5 datasets
ChIP MCF-7 ENCSR000BUY.NR2F2.MCF-7 167 bp overlap
ChIP liver ENCFF565JGD 278 bp overlap
ChIP liver ENCSR168SMX.NR2F2.liver 278 bp overlap
ChIP liver ENCSR338MMB.NR2F2.liver 250 bp overlap
ChIP uterus_STROMA_ENDOMETRIUM GSE52008.NR2F2.uterus_STROMA_ENDOMETRIUM 188 bp overlap
NR3C1 3 datasets
ChIP BEAS-2B_TNF_IA1 GSE125623.NR3C1.BEAS-2B_TNF_IA1 256 bp overlap
ChIP BEAS-2B_Veh_IA1 GSE125623.NR3C1.BEAS-2B_Veh_IA1 278 bp overlap
ChIP MDA-MB-231 GSE152203.NR3C1.MDA-MB-231 156 bp overlap
POLR2A 1 dataset
ChIP spleen ENCFF446ZGT 170 bp overlap
POU2F1 1 dataset
ChIP T-47D_D538G GSE148277.POU2F1.T-47D_D538G 221 bp overlap
POU4F2 1 dataset
ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 120 bp overlap
POU5F1 1 dataset
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 278 bp overlap
RAD21 7 datasets
ChIP A-549 ENCSR000BUC.RAD21.A-549 141 bp overlap
ChIP H1 ENCFF698EWO 211 bp overlap
ChIP HEK293_siE1A GSE130135.RAD21.HEK293_siE1A 275 bp overlap
ChIP IMR-90 ENCSR000EFJ.RAD21.IMR-90 126 bp overlap
ChIP T-47D_triptolide GSE111923.RAD21.T-47D_triptolide 249 bp overlap
ChIP neural ENCSR198ZYJ.RAD21.neural 269 bp overlap
ChIP neural cell ENCFF564MOT 67 bp overlap
RCOR1 1 dataset
ChIP IMR-90 ENCSR000EFG.RCOR1.IMR-90 163 bp overlap
RXRA 2 datasets
ChIP liver ENCFF077DAP 278 bp overlap
ChIP liver ENCFF807CIA 225 bp overlap
SIN3A 1 dataset
ChIP WA01 ENCSR000EBO.SIN3A.WA01 196 bp overlap
SMAD2-3 2 datasets
ChIP HGrC1_EV GSE138496.SMAD2-3.HGrC1_EV 140 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 260 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 278 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 278 bp overlap
SMAD3 1 dataset
ChIP HCC1954 GSE104760.SMAD3.HCC1954 172 bp overlap
SMARCA4 9 datasets
ChIP A-549_AG15685 GSE132290.SMARCA4.A-549_AG15685 278 bp overlap
ChIP A-549_AG15688 GSE132290.SMARCA4.A-549_AG15688 180 bp overlap
ChIP A-549_AG15689 GSE132290.SMARCA4.A-549_AG15689 220 bp overlap
ChIP MCF-7_parental GSE123284.SMARCA4.MCF-7_parental 201 bp overlap
ChIP NPC_K755R-siAP GSE122631.SMARCA4.NPC_K755R-siAP 278 bp overlap
ChIP NPC_siCT GSE122631.SMARCA4.NPC_siCT 278 bp overlap
ChIP NPC_siSOX GSE122631.SMARCA4.NPC_siSOX 278 bp overlap
ChIP TTC-1240 GSE124903.SMARCA4.TTC-1240 218 bp overlap
ChIP endometrial-epithelial-cells_KO GSE106660.SMARCA4.endometrial-epithelial-cells_KO 278 bp overlap
SMARCB1 3 datasets
ChIP MCF-7_Fulvestrant GSE123284.SMARCB1.MCF-7_Fulvestrant 201 bp overlap
ChIP MCF-7_estrogen GSE123284.SMARCB1.MCF-7_estrogen 275 bp overlap
ChIP proliferating-human-fibroblast GSE131711.SMARCB1.proliferating-human-fibroblast 217 bp overlap
SMC1A 1 dataset
ChIP A-549 GSE76893.SMC1A.A-549 217 bp overlap
SMC3 6 datasets
ChIP HeLa GSE126990.SMC3.HeLa 166 bp overlap
ChIP HeLa-Kyoto GSE102884.SMC3.HeLa-Kyoto 166 bp overlap
ChIP HeLa-Kyoto GSE138405.SMC3.HeLa-Kyoto 166 bp overlap
ChIP HeLa-Kyoto_WAPL_PDS-depleted GSE102884.SMC3.HeLa-Kyoto_WAPL_PDS-depleted 226 bp overlap
ChIP IMR-90 ENCSR000HPG.SMC3.IMR-90 196 bp overlap
ChIP neural ENCSR404BPV.SMC3.neural 229 bp overlap
SOX2 1 dataset
ChIP HNSC GSE69479.SOX2.HNSC 152 bp overlap
SP1 1 dataset
ChIP A-549 ENCSR000BPE.SP1.A-549 192 bp overlap
STAG1 2 datasets
ChIP MCF-7 ERP000209.STAG1.MCF-7 184 bp overlap
ChIP MCF-7_E2 ERP000209.STAG1.MCF-7_E2 110 bp overlap
STAT3 4 datasets
ChIP HCC1187 GSE152203.STAT3.HCC1187 132 bp overlap
ChIP MDA-MB-468_EtOH GSE85579.STAT3.MDA-MB-468_EtOH 147 bp overlap
ChIP T-47D_JC5054 GSE126004.STAT3.T-47D_JC5054 183 bp overlap
ChIP T-47D_JC5062 GSE126004.STAT3.T-47D_JC5062 226 bp overlap
TCF12 1 dataset
ChIP A-549 ENCSR000BQQ.TCF12.A-549 132 bp overlap
TEAD1 5 datasets
ChIP HUCCT1 GSE68296.TEAD1.HUCCT1 199 bp overlap
ChIP MSTO GSE68170.TEAD1.MSTO 278 bp overlap
ChIP adipocyte GSE140782.TEAD1.adipocyte 278 bp overlap
ChIP keratinocyte GSE138727.TEAD1.keratinocyte 192 bp overlap
ChIP pancreas_12D ERP008682.TEAD1.pancreas_12D 204 bp overlap
TEAD4 12 datasets
ChIP BJ_fibroblast_CD13-neg GSE114367.TEAD4.BJ_fibroblast_CD13-neg 208 bp overlap
ChIP ESC S26-ESC-d0-TEAD4-exp1 152 bp overlap
ChIP MCF-7_E2 GSE125594.TEAD4.MCF-7_E2 217 bp overlap
ChIP PC-9_1DF GSE131687.TEAD4.PC-9_1DF 278 bp overlap
ChIP PC-9_1DF_DMSO GSE131687.TEAD4.PC-9_1DF_DMSO 278 bp overlap
ChIP PC-9_2DF GSE131687.TEAD4.PC-9_2DF 278 bp overlap
ChIP PC-9_2DF_DMSO GSE131687.TEAD4.PC-9_2DF_DMSO 278 bp overlap
ChIP SK-MEL-147 GSE94488.TEAD4.SK-MEL-147 192 bp overlap
ChIP SNU-216 GSE44416.TEAD4.SNU-216 226 bp overlap
ChIP T-47D_E2 GSE125594.TEAD4.T-47D_E2 238 bp overlap
ChIP T-47D_Veh GSE125594.TEAD4.T-47D_Veh 278 bp overlap
ChIP hMSC-TERT4 GSE140782.TEAD4.hMSC-TERT4 266 bp overlap
TFAP2A 1 dataset
ChIP WA09 GSE105081.TFAP2A.WA09 173 bp overlap
TFAP2C 5 datasets
ChIP HCC1954 GSE126897.TFAP2C.HCC1954 201 bp overlap
ChIP MCF-7_E2 GSE23852.TFAP2C.MCF-7_E2 192 bp overlap
ChIP MCF-7_ETOH GSE23852.TFAP2C.MCF-7_ETOH 237 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 278 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 278 bp overlap
THAP1 1 dataset
Motif DE_60h DE_60h-THAP1_MA0597.3 8 bp overlap
TWIST1 4 datasets
ChIP SHEP-21N GSE80151.TWIST1.SHEP-21N 278 bp overlap
ChIP SHEP-21N GSE80151.TWIST1.SHEP-21N 237 bp overlap
ChIP SHEP-21N_24h GSE80151.TWIST1.SHEP-21N_24h 237 bp overlap
ChIP SHEP-21N_DOX_0H GSE80151.TWIST1.SHEP-21N_DOX_0H 278 bp overlap
YAP1 1 dataset
ChIP MCF-7 GSE107013.YAP1.MCF-7 161 bp overlap
YY1 1 dataset
ChIP WA01 ENCSR000BKD.YY1.WA01 174 bp overlap
YY1AP1 7 datasets
ChIP MCF-7_Veh GSE125594.YY1AP1.MCF-7_Veh 213 bp overlap
ChIP PC-9_1DF GSE131687.YY1AP1.PC-9_1DF 278 bp overlap
ChIP PC-9_1DF_DMSO GSE131687.YY1AP1.PC-9_1DF_DMSO 278 bp overlap
ChIP PC-9_2DF GSE131687.YY1AP1.PC-9_2DF 278 bp overlap
ChIP PC-9_2DF_DMSO GSE131687.YY1AP1.PC-9_2DF_DMSO 278 bp overlap
ChIP T-47D_E2 GSE125594.YY1AP1.T-47D_E2 278 bp overlap
ChIP T-47D_Veh GSE125594.YY1AP1.T-47D_Veh 278 bp overlap
ZBTB6 1 dataset
Motif DE_60h DE_60h-ZBTB6_MA1581.2 9 bp overlap
ZFP14 1 dataset
Motif DE_60h DE_60h-ZFP14_MA1972.1 15 bp overlap
ZMYND8 1 dataset
ChIP MDA-MB-231 GSE108833.ZMYND8.MDA-MB-231 217 bp overlap
ZNF16 1 dataset
Motif DE_60h DE_60h-ZNF16_MA1654.2 21 bp overlap
ZNF675 1 dataset
Motif DE_60h DE_60h-ZNF675_MA1714.2 19 bp overlap
ZNF750 1 dataset
ChIP keratinocyte_diff GSE57702.ZNF750.keratinocyte_diff 114 bp overlap