chr15 : 59,904,390 59,904,996
606 bp 148 TFs 0 linked genes
This 606 bp open chromatin element has no linked target genes and is bound by 148 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr15:59,899,390 – 59,909,996
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
148 transcription factors
Source
Cell type
ASCL1 1 dataset
Motif DE_24h DE_24h-ASCL1_MA1631.2 9 bp overlap
ATF2 1 dataset
Motif DE_24h DE_24h-ATF2_MA1632.2 10 bp overlap
BACH1 1 dataset
ChIP WA01 ENCSR000EBQ.BACH1.WA01 149 bp overlap
BCL11A 1 dataset
ChIP HUDEP-2_30min GSE104676.BCL11A.HUDEP-2_30min 69 bp overlap
BCOR 1 dataset
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 224 bp overlap
BRD4 2 datasets
ChIP MCF-7_parental GSE123284.BRD4.MCF-7_parental 606 bp overlap
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.BRD4.MCF-7_parental_4-hydroxytamoxifen 473 bp overlap
CTCF 6 datasets
Motif DE_12h DE_12h-CTCF_MA1930.2 33 bp overlap
Motif DE_24h DE_24h-CTCF_MA1930.2 33 bp overlap
ChIP GM23338 ENCFF772DML 201 bp overlap
ChIP anterior-temporal-cortex_fetal GSE116825.CTCF.anterior-temporal-cortex_fetal 154 bp overlap
ChIP endodermal cell ENCFF471YCZ 437 bp overlap
ChIP hiPSC_CVI GSE106870.CTCF.hiPSC_CVI 134 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF680YXW 304 bp overlap
E2F1 2 datasets
Motif DE_12h DE_12h-E2F1_MA0024.3 12 bp overlap
Motif DE_24h DE_24h-E2F1_MA0024.3 12 bp overlap
E2F6 1 dataset
ChIP WA01 ENCSR000BSI.E2F6.WA01 161 bp overlap
EED 1 dataset
ChIP ProEs GSE59087.EED.ProEs 135 bp overlap
EGR1 1 dataset
Motif DE_24h DE_24h-EGR1_MA0162.5 10 bp overlap
EOMES 2 datasets
Motif DE_24h DE_24h-EOMES_MA0800.2 9 bp overlap
ChIP hESC GSE26097.EOMES.hESC 212 bp overlap
ESR1 5 datasets
ChIP MCF-7 GSE76893.ESR1.MCF-7 229 bp overlap
ChIP MCF-7_SICTR_E2 GSE40129.ESR1.MCF-7_SICTR_E2 135 bp overlap
ChIP MCF-7_SIGATA_E2 GSE40129.ESR1.MCF-7_SIGATA_E2 149 bp overlap
ChIP MCF-7_TamR GSE128445.ESR1.MCF-7_TamR 266 bp overlap
ChIP MDA-MB-134-VI_ESTROGEN GSE51022.ESR1.MDA-MB-134-VI_ESTROGEN 250 bp overlap
EZH2 4 datasets
ChIP A673 ENCFF955JRZ 347 bp overlap
ChIP HCT-116 ENCSR046HGP.EZH2.HCT-116 204 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 592 bp overlap
ChIP keratinocyte ENCFF070STK 468 bp overlap
FIGLA 4 datasets
Motif DE_12h DE_12h-FIGLA_MA0820.2 6 bp overlap
Motif DE_24h DE_24h-FIGLA_MA0820.2 6 bp overlap
Motif DE_24h DE_24h-FIGLA_MA0820.2 6 bp overlap
Motif DE_24h DE_24h-FIGLA_MA0820.2 6 bp overlap
FOXA1 6 datasets
ChIP 22Rv1_Dox GSE85558.FOXA1.22Rv1_Dox 216 bp overlap
ChIP LNCaP_S2101-4H GSE114266.FOXA1.LNCaP_S2101-4H 222 bp overlap
ChIP MCF-7 ERP001226.FOXA1.MCF-7 127 bp overlap
ChIP MCF-7_E2 GSE59530.FOXA1.MCF-7_E2 141 bp overlap
ChIP MCF-7_E2 GSE23852.FOXA1.MCF-7_E2 128 bp overlap
ChIP NCI-H3122 GSE39998.FOXA1.NCI-H3122 238 bp overlap
FOXB1 1 dataset
Motif DE_24h DE_24h-FOXB1_MA0845.1 11 bp overlap
FOXC1 1 dataset
Motif DE_24h DE_24h-FOXC1_MA0032.2 11 bp overlap
FOXC2 1 dataset
Motif DE_24h DE_24h-FOXC2_MA0846.2 11 bp overlap
FOXE1 1 dataset
Motif DE_24h DE_24h-FOXE1_MA1487.3 12 bp overlap
FOXO6 1 dataset
Motif DE_24h DE_24h-FOXO6_MA0849.1 7 bp overlap
Foxl2 1 dataset
Motif DE_24h DE_24h-Foxl2_MA1607.2 10 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 335 bp overlap
ChIP DE DE-GATA4-2 283 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 308 bp overlap
ChIP DE DE-GATA6-2 335 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 470 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 442 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 590 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 296 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 606 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 606 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 311 bp overlap
GTF3C2 1 dataset
ChIP H9 GSE94418.GTF3C2.H9 204 bp overlap
Gfi1B 1 dataset
Motif DE_24h DE_24h-Gfi1B_MA0483.2 10 bp overlap
IKZF1 2 datasets
Motif DE_12h DE_12h-IKZF1_MA1508.2 8 bp overlap
Motif DE_24h DE_24h-IKZF1_MA1508.2 8 bp overlap
IRF3 1 dataset
Motif DE_24h DE_24h-IRF3_MA1418.2 17 bp overlap
IRF4 1 dataset
Motif DE_24h DE_24h-IRF4_MA1419.2 14 bp overlap
JUN 5 datasets
Motif DE_24h DE_24h-JUN_MA0488.2 10 bp overlap
ChIP DE_D1 S08-DE-d1-JUN-exp1 253 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 425 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 444 bp overlap
ChIP MCF-7_TamR GSE128445.JUN.MCF-7_TamR 254 bp overlap
JUND 1 dataset
Motif DE_24h DE_24h-JUND_MA0492.2 11 bp overlap
KDM4A 1 dataset
ChIP WA01 ENCSR000AVC.KDM4A.WA01 164 bp overlap
KLF1 1 dataset
Motif DE_24h DE_24h-KLF1_MA0493.3 8 bp overlap
KLF10 1 dataset
Motif DE_24h DE_24h-KLF10_MA1511.2 9 bp overlap
KLF11 2 datasets
Motif DE_24h DE_24h-KLF11_MA1512.2 10 bp overlap
Motif DE_24h DE_24h-KLF11_MA1512.2 10 bp overlap
KLF12 1 dataset
Motif DE_24h DE_24h-KLF12_MA0742.2 9 bp overlap
KLF14 1 dataset
Motif DE_24h DE_24h-KLF14_MA0740.2 9 bp overlap
KLF15 1 dataset
Motif DE_24h DE_24h-KLF15_MA1513.2 8 bp overlap
KLF16 2 datasets
Motif DE_24h DE_24h-KLF16_MA0741.1 11 bp overlap
Motif DE_24h DE_24h-KLF16_MA0741.1 11 bp overlap
KLF2 1 dataset
Motif DE_24h DE_24h-KLF2_MA1515.2 8 bp overlap
KLF4 2 datasets
ChIP BJ_INDUCED GSE36570.KLF4.BJ_INDUCED 213 bp overlap
Motif DE_24h DE_24h-KLF4_MA0039.5 8 bp overlap
KLF5 3 datasets
Motif DE_24h DE_24h-KLF5_MA0599.1 10 bp overlap
Motif DE_24h DE_24h-KLF5_MA0599.1 10 bp overlap
ChIP HEK293_D418N GSE88976.KLF5.HEK293_D418N 168 bp overlap
KLF7 1 dataset
Motif DE_24h DE_24h-KLF7_MA1959.2 8 bp overlap
KLF9 1 dataset
Motif DE_24h DE_24h-KLF9_MA1107.3 11 bp overlap
MAX 1 dataset
ChIP WTC11 ENCFF223QFY 568 bp overlap
MED26 1 dataset
ChIP U2OS_SHCTR GSE73742.MED26.U2OS_SHCTR 320 bp overlap
MEIS1 3 datasets
Motif DE_24h DE_24h-MEIS1_MA0498.3 5 bp overlap
Motif DE_24h DE_24h-MEIS1_MA0498.3 5 bp overlap
Motif DE_24h DE_24h-MEIS1_MA0498.3 5 bp overlap
MXI1 1 dataset
Motif DE_24h DE_24h-MXI1_MA1108.3 6 bp overlap
MYOD1 1 dataset
ChIP RH30_DMSO GSE85169.MYOD1.RH30_DMSO 239 bp overlap
NANOG 1 dataset
ChIP HUES-8 GSE109524.NANOG.HUES-8 266 bp overlap
NFATC3 1 dataset
Motif DE_24h DE_24h-NFATC3_MA0625.3 6 bp overlap
NFATC4 1 dataset
Motif DE_24h DE_24h-NFATC4_MA1525.3 9 bp overlap
NKX2-1 1 dataset
ChIP NCI-H3122 GSE39998.NKX2-1.NCI-H3122 186 bp overlap
NKX2-3 1 dataset
Motif DE_24h DE_24h-NKX2-3_MA0672.2 8 bp overlap
NKX2-4 1 dataset
Motif DE_24h DE_24h-NKX2-4_MA2003.2 8 bp overlap
NKX2-8 1 dataset
Motif DE_24h DE_24h-NKX2-8_MA0673.2 8 bp overlap
NR2C2 1 dataset
Motif DE_24h DE_24h-NR2C2_MA0504.2 14 bp overlap
NR3C1 1 dataset
ChIP A-549 ENCSR000BHE.NR3C1.A-549 129 bp overlap
NR4A1 2 datasets
Motif DE_24h DE_24h-NR4A1_MA1112.3 8 bp overlap
Motif DE_24h DE_24h-NR4A1_MA1112.3 8 bp overlap
NR4A2 2 datasets
Motif DE_24h DE_24h-NR4A2_MA0160.3 8 bp overlap
Motif DE_24h DE_24h-NR4A2_MA0160.3 8 bp overlap
NRL 1 dataset
Motif DE_24h DE_24h-NRL_MA0842.3 12 bp overlap
Nfat5 1 dataset
Motif DE_24h DE_24h-Nfat5_MA0606.3 8 bp overlap
Nfatc1 1 dataset
Motif DE_24h DE_24h-Nfatc1_MA0624.3 6 bp overlap
Nfatc2 1 dataset
Motif DE_24h DE_24h-Nfatc2_MA0152.3 8 bp overlap
Nkx2-1 1 dataset
Motif DE_24h DE_24h-Nkx2-1_MA1994.2 7 bp overlap
PATZ1 2 datasets
Motif DE_24h DE_24h-PATZ1_MA1961.2 11 bp overlap
Motif DE_24h DE_24h-PATZ1_MA1961.2 11 bp overlap
PAX5 1 dataset
ChIP fetal_testis GSE100639.PAX5.fetal_testis 165 bp overlap
PAX9 1 dataset
Motif DE_24h DE_24h-PAX9_MA0781.2 16 bp overlap
PBX3 3 datasets
Motif DE_12h DE_12h-PBX3_MA1114.2 11 bp overlap
Motif DE_24h DE_24h-PBX3_MA1114.2 11 bp overlap
Motif DE_24h DE_24h-PBX3_MA1114.2 11 bp overlap
PKNOX1 1 dataset
Motif DE_24h DE_24h-PKNOX1_MA0782.3 10 bp overlap
POU4F2 1 dataset
Motif DE_24h DE_24h-POU4F2_MA0683.2 15 bp overlap
POU5F1 2 datasets
ChIP BG03 GSE21614.POU5F1.BG03 190 bp overlap
ChIP DE_D1 DED1-OCT4_Batch_II 606 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 465 bp overlap
PRDM9 1 dataset
Motif DE_24h DE_24h-PRDM9_MA1723.2 20 bp overlap
Pgr 1 dataset
Motif DE_24h DE_24h-Pgr_MA2323.1 17 bp overlap
Prdm15 3 datasets
Motif DE_12h DE_12h-Prdm15_MA1616.2 11 bp overlap
Motif DE_24h DE_24h-Prdm15_MA1616.2 11 bp overlap
Motif DE_24h DE_24h-Prdm15_MA1616.2 11 bp overlap
Prdm5 2 datasets
Motif DE_12h DE_12h-Prdm5_MA1999.2 11 bp overlap
Motif DE_24h DE_24h-Prdm5_MA1999.2 11 bp overlap
RAD21 1 dataset
ChIP H1 ENCFF698EWO 241 bp overlap
SCRT1 1 dataset
Motif DE_24h DE_24h-SCRT1_MA0743.3 10 bp overlap
SIN3A 1 dataset
ChIP hiPSC_IID12 GSE106870.SIN3A.hiPSC_IID12 162 bp overlap
SIX1 1 dataset
Motif DE_24h DE_24h-SIX1_MA1118.2 9 bp overlap
SIX2 1 dataset
Motif DE_24h DE_24h-SIX2_MA1119.2 11 bp overlap
SMAD2 1 dataset
ChIP hESC_YAP-_activinA_15h GSE99202.SMAD2.hESC_YAP-_activinA_15h 306 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 417 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 406 bp overlap
SMAD2_3 2 datasets
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 227 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 361 bp overlap
SMARCA4 2 datasets
ChIP HS-SY-2_HA-tagged GSE108926.SMARCA4.HS-SY-2_HA-tagged 357 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 410 bp overlap
SMARCC1 2 datasets
ChIP MCF-7 GSE124225.SMARCC1.MCF-7 267 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 406 bp overlap
SNAI1 1 dataset
Motif DE_24h DE_24h-SNAI1_MA1558.2 7 bp overlap
SNAI2 1 dataset
Motif DE_24h DE_24h-SNAI2_MA0745.3 8 bp overlap
SNAI3 1 dataset
Motif DE_24h DE_24h-SNAI3_MA1559.2 9 bp overlap
SOX11 1 dataset
ChIP GRANT-A519 GSE52146.SOX11.GRANT-A519 134 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 423 bp overlap
SP1 1 dataset
Motif DE_24h DE_24h-SP1_MA0079.5 9 bp overlap
SP2 1 dataset
Motif DE_24h DE_24h-SP2_MA0516.3 9 bp overlap
SP3 2 datasets
Motif DE_24h DE_24h-SP3_MA0746.3 11 bp overlap
Motif DE_24h DE_24h-SP3_MA0746.3 11 bp overlap
SP4 1 dataset
Motif DE_24h DE_24h-SP4_MA0685.2 9 bp overlap
SP5 2 datasets
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
Motif DE_24h DE_24h-SP5_MA1965.2 6 bp overlap
SP8 2 datasets
Motif DE_24h DE_24h-SP8_MA0747.2 11 bp overlap
Motif DE_24h DE_24h-SP8_MA0747.2 11 bp overlap
SP9 2 datasets
Motif DE_24h DE_24h-SP9_MA1564.2 10 bp overlap
Motif DE_24h DE_24h-SP9_MA1564.2 10 bp overlap
SPDEF 1 dataset
ChIP MCF-7 ENCSR042GSX.SPDEF.MCF-7 186 bp overlap
SS18 1 dataset
ChIP Aska-SS GSE108025.SS18.Aska-SS 284 bp overlap
Stat2 1 dataset
Motif DE_24h DE_24h-Stat2_MA1623.2 10 bp overlap
Stat6 1 dataset
Motif DE_24h DE_24h-Stat6_MA0520.2 10 bp overlap
TBR1 1 dataset
Motif DE_24h DE_24h-TBR1_MA0802.2 9 bp overlap
TBX18 2 datasets
Motif DE_24h DE_24h-TBX18_MA1565.2 9 bp overlap
Motif DE_24h DE_24h-TBX18_MA1565.2 9 bp overlap
TBX19 1 dataset
Motif DE_24h DE_24h-TBX19_MA0804.2 17 bp overlap
TBX2 2 datasets
Motif DE_24h DE_24h-TBX2_MA0688.2 9 bp overlap
Motif DE_24h DE_24h-TBX2_MA0688.2 9 bp overlap
TBX21 1 dataset
Motif DE_24h DE_24h-TBX21_MA0690.3 10 bp overlap
TBX3 2 datasets
Motif DE_24h DE_24h-TBX3_MA1566.3 9 bp overlap
Motif DE_24h DE_24h-TBX3_MA1566.3 9 bp overlap
TBXT 1 dataset
Motif DE_24h DE_24h-TBXT_MA0009.2 16 bp overlap
TCF12 2 datasets
Motif DE_24h DE_24h-TCF12_MA1648.2 7 bp overlap
ChIP WA01 ENCSR000BIT.TCF12.WA01 119 bp overlap
TCF3 1 dataset
Motif DE_24h DE_24h-TCF3_MA0522.4 7 bp overlap
TCF4 1 dataset
Motif DE_24h DE_24h-TCF4_MA0830.3 8 bp overlap
TLE3 1 dataset
ChIP 22Rv1 GSE123618.TLE3.22Rv1 256 bp overlap
TP53 2 datasets
Motif DE_24h DE_24h-TP53_MA0106.3 18 bp overlap
ChIP hESC_DIFF GSE39912.TP53.hESC_DIFF 276 bp overlap
Tbx6 2 datasets
Motif DE_24h DE_24h-Tbx6_MA1567.3 9 bp overlap
Motif DE_24h DE_24h-Tbx6_MA1567.3 9 bp overlap
ZBED4 1 dataset
Motif DE_24h DE_24h-ZBED4_MA2328.1 10 bp overlap
ZBTB24 1 dataset
Motif DE_24h DE_24h-ZBTB24_MA2330.1 10 bp overlap
ZBTB6 2 datasets
Motif DE_12h DE_12h-ZBTB6_MA1581.2 9 bp overlap
Motif DE_24h DE_24h-ZBTB6_MA1581.2 9 bp overlap
ZEB1 4 datasets
Motif DE_12h DE_12h-ZEB1_MA0103.4 6 bp overlap
Motif DE_24h DE_24h-ZEB1_MA0103.4 6 bp overlap
Motif DE_24h DE_24h-ZEB1_MA0103.4 6 bp overlap
Motif DE_24h DE_24h-ZEB1_MA0103.4 6 bp overlap
ZFP14 2 datasets
Motif DE_12h DE_12h-ZFP14_MA1972.1 15 bp overlap
Motif DE_24h DE_24h-ZFP14_MA1972.1 15 bp overlap
ZIM3 1 dataset
Motif DE_24h DE_24h-ZIM3_MA1709.2 11 bp overlap
ZKSCAN3 1 dataset
Motif DE_24h DE_24h-ZKSCAN3_MA1973.2 14 bp overlap
ZNF148 2 datasets
Motif DE_24h DE_24h-ZNF148_MA1653.2 10 bp overlap
Motif DE_24h DE_24h-ZNF148_MA1653.2 10 bp overlap
ZNF281 2 datasets
Motif DE_24h DE_24h-ZNF281_MA1630.3 10 bp overlap
Motif DE_24h DE_24h-ZNF281_MA1630.3 10 bp overlap
ZNF320 1 dataset
Motif DE_24h DE_24h-ZNF320_MA1976.2 20 bp overlap
ZNF354C 2 datasets
Motif DE_12h DE_12h-ZNF354C_MA0130.1 6 bp overlap
Motif DE_24h DE_24h-ZNF354C_MA0130.1 6 bp overlap
ZNF366 2 datasets
ChIP HEK293 ENCFF799ATK 138 bp overlap
ChIP HEK293 ENCSR106EBH.ZNF366.HEK293 54 bp overlap
ZNF417 2 datasets
Motif DE_12h DE_12h-ZNF417_MA1727.2 7 bp overlap
Motif DE_24h DE_24h-ZNF417_MA1727.2 7 bp overlap
ZNF460 1 dataset
Motif DE_24h DE_24h-ZNF460_MA1596.1 16 bp overlap
ZNF528 2 datasets
Motif DE_12h DE_12h-ZNF528_MA1597.1 17 bp overlap
Motif DE_24h DE_24h-ZNF528_MA1597.1 17 bp overlap
ZNF530 1 dataset
Motif DE_24h DE_24h-ZNF530_MA1981.2 14 bp overlap
ZNF75A 2 datasets
Motif DE_24h DE_24h-ZNF75A_MA2097.1 12 bp overlap
Motif DE_24h DE_24h-ZNF75A_MA2097.1 12 bp overlap
ZNF75D 3 datasets
Motif DE_12h DE_12h-ZNF75D_MA1601.2 12 bp overlap
Motif DE_24h DE_24h-ZNF75D_MA1601.2 12 bp overlap
Motif DE_24h DE_24h-ZNF75D_MA1601.2 12 bp overlap
ZNF766 1 dataset
Motif DE_24h DE_24h-ZNF766_MA2098.1 9 bp overlap
ZSCAN4 2 datasets
Motif DE_12h DE_12h-ZSCAN4_MA1155.1 15 bp overlap
Motif DE_24h DE_24h-ZSCAN4_MA1155.1 15 bp overlap
Zfp335 1 dataset
Motif DE_24h DE_24h-Zfp335_MA2002.2 7 bp overlap
Zfp809 1 dataset
Motif DE_24h DE_24h-Zfp809_MA2125.1 9 bp overlap
Zfp961 2 datasets
Motif DE_12h DE_12h-Zfp961_MA2126.1 8 bp overlap
Motif DE_24h DE_24h-Zfp961_MA2126.1 8 bp overlap
Zfx 2 datasets
Motif DE_12h DE_12h-Zfx_MA0146.3 10 bp overlap
Motif DE_24h DE_24h-Zfx_MA0146.3 10 bp overlap