chr14 : 60,510,654 60,511,489
835 bp 109 TFs 2 linked genes
This 835 bp open chromatin element is linked to SIX6 and ENSG00000258670 and is bound by 109 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
SIX6 1.5 kb Proximal Proximity
ENSG00000258670 3.6 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr14:60,505,654 – 60,516,489
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
109 transcription factors
Source
Cell type
AR 3 datasets
ChIP MDA-MB-453 ERP003503.AR.MDA-MB-453 242 bp overlap
ChIP MDA-MB-453_FOXA1 ERP003503.AR.MDA-MB-453_FOXA1 145 bp overlap
ChIP prostate_fetal-fibroblast GSE90772.AR.prostate_fetal-fibroblast 456 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 784 bp overlap
BCOR 1 dataset
ChIP WA01_KDM2B_KO GSE104690.BCOR.WA01_KDM2B_KO 815 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 310 bp overlap
BRD4 3 datasets
ChIP CLL_patient2_4h_CpG_BET GSE109411.BRD4.CLL_patient2_4h_CpG_BET 278 bp overlap
ChIP MCF-10A ERP003925.BRD4.MCF-10A 714 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 835 bp overlap
CBFB 2 datasets
ChIP ME-1 GSE46044.CBFB.ME-1 253 bp overlap
ChIP ME-1 GSE46044.CBFB.ME-1 162 bp overlap
CBX2 1 dataset
ChIP K-562 ENCSR000ATU.CBX2.K-562 238 bp overlap
CBX4 1 dataset
ChIP hMSC GSE117084.CBX4.hMSC 589 bp overlap
CBX8 3 datasets
ChIP H1 ENCFF095JHA 236 bp overlap
ChIP K-562 ENCSR000ATW.CBX8.K-562 455 bp overlap
ChIP K-562 ENCSR000ATW.CBX8.K-562 256 bp overlap
CDK9 1 dataset
ChIP HCT-116 GSE72622.CDK9.HCT-116 171 bp overlap
CHD1 3 datasets
ChIP WA01 ENCSR000AQK.CHD1.WA01 274 bp overlap
ChIP hMSC-TERT GSE89179.CHD1.hMSC-TERT 372 bp overlap
ChIP hMSC-TERT_osteoblast GSE89179.CHD1.hMSC-TERT_osteoblast 230 bp overlap
CREB1 1 dataset
ChIP WA01 ENCSR000BSN.CREB1.WA01 140 bp overlap
CTBP2 2 datasets
ChIP WA01 ENCSR000EUO.CTBP2.WA01 425 bp overlap
ChIP WA01 ENCSR000EUO.CTBP2.WA01 270 bp overlap
CTCF 2 datasets
ChIP T-47D_Y537S GSE148277.CTCF.T-47D_Y537S 526 bp overlap
ChIP neural ENCSR822CEA.CTCF.neural 158 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF460KDD 352 bp overlap
E2F6 2 datasets
Motif DE_12h DE_12h-E2F6_MA0471.3 8 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 286 bp overlap
E2F8 1 dataset
Motif DE_12h DE_12h-E2F8_MA0865.3 9 bp overlap
EED 1 dataset
ChIP ProEs GSE59087.EED.ProEs 603 bp overlap
ERG 1 dataset
ChIP ME-1 GSE46044.ERG.ME-1 203 bp overlap
ESR1 31 datasets
ChIP Ishikawa GSE99905.ESR1.Ishikawa 398 bp overlap
ChIP Ishikawa_C2-14 GSE147141.ESR1.Ishikawa_C2-14 118 bp overlap
ChIP Ishikawa_siETV4-72h GSE129803.ESR1.Ishikawa_siETV4-72h 219 bp overlap
ChIP Ishikawa_siNTC-72h GSE129803.ESR1.Ishikawa_siNTC-72h 199 bp overlap
ChIP Ishikawa_siNTC-96h GSE129803.ESR1.Ishikawa_siNTC-96h 158 bp overlap
ChIP MCF-7 GSE148277.ESR1.MCF-7 292 bp overlap
ChIP MCF-7_ARID1A-KO_4-OHT GSE123284.ESR1.MCF-7_ARID1A-KO_4-OHT 245 bp overlap
ChIP MCF-7_ARID1A-KO_4-OHT_clone14 GSE123284.ESR1.MCF-7_ARID1A-KO_4-OHT_clone14 338 bp overlap
ChIP MCF-7_DMSO GSE125594.ESR1.MCF-7_DMSO 135 bp overlap
ChIP MCF-7_E2 ERP000209.ESR1.MCF-7_E2 61 bp overlap
ChIP MCF-7_E2-20min-ERalpha GSE94023.ESR1.MCF-7_E2-20min-ERalpha 145 bp overlap
ChIP MCF-7_E2-40min-ERalpha GSE94023.ESR1.MCF-7_E2-40min-ERalpha 63 bp overlap
ChIP MCF-7_E2-5min-ERalpha GSE94023.ESR1.MCF-7_E2-5min-ERalpha 102 bp overlap
ChIP MCF-7_E2_45m GSE67295.ESR1.MCF-7_E2_45m 106 bp overlap
ChIP MCF-7_PROG GSE68355.ESR1.MCF-7_PROG 249 bp overlap
ChIP MCF-7_PaPE-1_OA GSE93510.ESR1.MCF-7_PaPE-1_OA 806 bp overlap
ChIP MCF-7_SHCTR_E2_TNF GSE59530.ESR1.MCF-7_SHCTR_E2_TNF 74 bp overlap
ChIP MCF-7_TamR GSE128445.ESR1.MCF-7_TamR 100 bp overlap
ChIP MCF-7_Veh_OA GSE93510.ESR1.MCF-7_Veh_OA 188 bp overlap
ChIP MCF-7_estradiol-progesterone_4h GSE99626.ESR1.MCF-7_estradiol-progesterone_4h 130 bp overlap
ChIP MCF-7_estradiol_45min_ChIP-and-reChIP GSE99626.ESR1.MCF-7_estradiol_45min_ChIP-and-reChIP 476 bp overlap
ChIP MCF-7_estradiol_4h GSE99626.ESR1.MCF-7_estradiol_4h 162 bp overlap
ChIP MCF-7_jc5850 GSE126004.ESR1.MCF-7_jc5850 74 bp overlap
ChIP MCF-7_jc5855 GSE126004.ESR1.MCF-7_jc5855 60 bp overlap
ChIP MCF-7_jc5856 GSE126004.ESR1.MCF-7_jc5856 189 bp overlap
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.ESR1.MCF-7_parental_4-hydroxytamoxifen 183 bp overlap
ChIP T-47D GSE148277.ESR1.T-47D 203 bp overlap
ChIP T-47D_D538G_E2 GSE148277.ESR1.T-47D_D538G_E2 176 bp overlap
ChIP T-47D_Y537S GSE148277.ESR1.T-47D_Y537S 210 bp overlap
ChIP T-47D_Y537S_E2 GSE148277.ESR1.T-47D_Y537S_E2 97 bp overlap
ChIP T-47D_Y537S_E2 GSE148277.ESR1.T-47D_Y537S_E2 252 bp overlap
EZH2 34 datasets
ChIP A673 ENCFF790MVL 549 bp overlap
ChIP A673 ENCFF955JRZ 507 bp overlap
ChIP B cell ENCFF803EMO 178 bp overlap
ChIP B-cell ENCSR000AUZ.EZH2.B-cell 835 bp overlap
ChIP GM23248 ENCFF404ZHM 52 bp overlap
ChIP GM23248 ENCFF506FWX 111 bp overlap
ChIP GM23248 ENCFF506FWX 328 bp overlap
ChIP GM23338 ENCFF613YON 835 bp overlap
ChIP GM23338 ENCFF886DXX 478 bp overlap
ChIP GM23338 ENCFF886DXX 370 bp overlap
ChIP H1 ENCFF232NZA 835 bp overlap
ChIP ProEs GSE59087.EZH2.ProEs 176 bp overlap
ChIP ProEs_SHCTR GSE59087.EZH2.ProEs_SHCTR 180 bp overlap
ChIP astrocyte ENCFF365JTP 835 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 835 bp overlap
ChIP fibroblast of dermis ENCFF029VZK 835 bp overlap
ChIP fibroblast of lung ENCFF479BAW 264 bp overlap
ChIP fibroblast of lung ENCFF479BAW 177 bp overlap
ChIP fibroblast of lung ENCFF479BAW 210 bp overlap
ChIP hESC GSE113817.EZH2.hESC 829 bp overlap
ChIP hESC_KO GSE113817.EZH2.hESC_KO 356 bp overlap
ChIP hepatocyte ENCFF118DKH 119 bp overlap
ChIP hepatocyte ENCFF118DKH 205 bp overlap
ChIP hepatocyte ENCFF552DZB 835 bp overlap
ChIP keratinocyte ENCFF070STK 438 bp overlap
ChIP keratinocyte ENCFF070STK 438 bp overlap
ChIP keratinocyte ENCFF070STK 80 bp overlap
ChIP mammary epithelial cell ENCFF224GAI 233 bp overlap
ChIP mammary epithelial cell ENCFF224GAI 386 bp overlap
ChIP neural cell ENCFF610EPB 327 bp overlap
ChIP neural cell ENCFF610EPB 401 bp overlap
ChIP neural progenitor cell ENCFF018MKA 835 bp overlap
ChIP neural progenitor cell ENCFF472NFV 835 bp overlap
ChIP peripheral-blood-mononuclear-cell_B-cell GSE115772.EZH2.peripheral-blood-mononuclear-cell_B-cell 829 bp overlap
FIGLA 1 dataset
Motif DE_12h DE_12h-FIGLA_MA0820.2 6 bp overlap
FOXA2 1 dataset
ChIP BJ1-hTERT_FoxHnf1aCoExp GSE90454.FOXA2.BJ1-hTERT_FoxHnf1aCoExp 619 bp overlap
FOXO1 1 dataset
ChIP CD34 GSE80773.FOXO1.CD34 151 bp overlap
FOXP4 1 dataset
ChIP WTC11 ENCFF708TAF 377 bp overlap
HEXIM1 1 dataset
ChIP HCT-116 GSE72622.HEXIM1.HCT-116 397 bp overlap
HIF1A 1 dataset
ChIP BEAS-2B_arsenic GSE145834.HIF1A.BEAS-2B_arsenic 292 bp overlap
HNF4A 1 dataset
Motif DE_12h DE_12h-HNF4A_MA1494.2 14 bp overlap
IRF3 1 dataset
Motif DE_12h DE_12h-IRF3_MA1418.2 17 bp overlap
IRF4 1 dataset
ChIP T-cell GSE136853.IRF4.T-cell 215 bp overlap
JUN 2 datasets
ChIP ESC S34-ESC-d0-JUN-exp2 271 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 453 bp overlap
KDM4A 1 dataset
ChIP WA01 ENCSR000AVC.KDM4A.WA01 480 bp overlap
KLF1 1 dataset
Motif DE_12h DE_12h-KLF1_MA0493.3 8 bp overlap
KLF10 1 dataset
Motif DE_12h DE_12h-KLF10_MA1511.2 9 bp overlap
KLF14 1 dataset
Motif DE_12h DE_12h-KLF14_MA0740.2 9 bp overlap
KLF15 1 dataset
Motif DE_12h DE_12h-KLF15_MA1513.2 8 bp overlap
KLF2 1 dataset
Motif DE_12h DE_12h-KLF2_MA1515.2 8 bp overlap
KLF4 1 dataset
Motif DE_12h DE_12h-KLF4_MA0039.5 8 bp overlap
KLF5 1 dataset
Motif DE_12h DE_12h-KLF5_MA0599.1 10 bp overlap
KLF6 1 dataset
Motif DE_12h DE_12h-KLF6_MA1517.2 9 bp overlap
KLF7 1 dataset
Motif DE_12h DE_12h-KLF7_MA1959.2 8 bp overlap
MTF2 2 datasets
ChIP DU145_SH4 GSE135623.MTF2.DU145_SH4 223 bp overlap
ChIP DU145_SH4 GSE135623.MTF2.DU145_SH4 159 bp overlap
MYCN 1 dataset
ChIP COG-N-415 GSE138295.MYCN.COG-N-415 682 bp overlap
MYOD1 1 dataset
ChIP IMR-90_GM GSE128527.MYOD1.IMR-90_GM 446 bp overlap
NKX2-3 1 dataset
Motif DE_12h DE_12h-NKX2-3_MA0672.2 8 bp overlap
NKX2-4 1 dataset
Motif DE_12h DE_12h-NKX2-4_MA2003.2 8 bp overlap
NKX2-8 1 dataset
Motif DE_12h DE_12h-NKX2-8_MA0673.2 8 bp overlap
OGG1 4 datasets
ChIP HEK293 GSE89017.OGG1.HEK293 605 bp overlap
ChIP HEK293_15min GSE89017.OGG1.HEK293_15min 501 bp overlap
ChIP HEK293_30_min GSE89017.OGG1.HEK293_30_min 485 bp overlap
ChIP HEK293_60_min GSE89017.OGG1.HEK293_60_min 520 bp overlap
OSR1 1 dataset
Motif DE_12h DE_12h-OSR1_MA1542.2 8 bp overlap
OSR2 1 dataset
Motif DE_12h DE_12h-OSR2_MA1646.2 8 bp overlap
PATZ1 1 dataset
Motif DE_12h DE_12h-PATZ1_MA1961.2 11 bp overlap
PAX8 1 dataset
Motif DE_12h DE_12h-PAX8_MA2094.1 16 bp overlap
PAX9 1 dataset
Motif DE_12h DE_12h-PAX9_MA0781.2 16 bp overlap
PCGF2 2 datasets
ChIP fibroblast_OHT GSE55605.PCGF2.fibroblast_OHT 238 bp overlap
ChIP fibroblast_OHT GSE55605.PCGF2.fibroblast_OHT 265 bp overlap
POLR2A 3 datasets
ChIP neural cell ENCFF604SPB 131 bp overlap
ChIP neural cell ENCFF604SPB 131 bp overlap
ChIP neural cell ENCFF604SPB 126 bp overlap
POU2F1 1 dataset
ChIP T-47D GSE148277.POU2F1.T-47D 202 bp overlap
POU5F1 3 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 835 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 521 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 835 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 812 bp overlap
PRDM14 1 dataset
ChIP NCCIT GSE71675.PRDM14.NCCIT 216 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 178 bp overlap
RELA 1 dataset
ChIP HEK293_30_min GSE89017.RELA.HEK293_30_min 261 bp overlap
RNF2 5 datasets
ChIP H1 ENCFF239FFS 835 bp overlap
ChIP HUES-64 GSE104059.RNF2.HUES-64 358 bp overlap
ChIP K-562 ENCSR820GND.RNF2.K-562 239 bp overlap
ChIP K-562 ENCSR820GND.RNF2.K-562 235 bp overlap
ChIP NCCIT GSE71675.RNF2.NCCIT 596 bp overlap
RORC 2 datasets
ChIP HCC70 GSE126380.RORC.HCC70 691 bp overlap
ChIP HCC70_XY018 GSE126380.RORC.HCC70_XY018 819 bp overlap
SALL3 2 datasets
ChIP hiPSC GSE104863.SALL3.hiPSC 266 bp overlap
ChIP hiPSC GSE104863.SALL3.hiPSC 188 bp overlap
SIN3A 1 dataset
ChIP WA01 ENCSR000EBO.SIN3A.WA01 161 bp overlap
SIRT6 1 dataset
ChIP SK-MEL-239_L-C-B GSE102813.SIRT6.SK-MEL-239_L-C-B 170 bp overlap
SIX2 3 datasets
ChIP HEK GSE73865.SIX2.HEK 314 bp overlap
ChIP kidney_fetal_16w GSE75948.SIX2.kidney_fetal_16w 199 bp overlap
ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 223 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8 GSE109524.SMAD2-3.HUES-8 339 bp overlap
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 399 bp overlap
SMARCA4 1 dataset
ChIP J-Lat_GFP-Clone-A72_DMSO GSE100266.SMARCA4.J-Lat_GFP-Clone-A72_DMSO 163 bp overlap
SMARCC1 3 datasets
ChIP ESC S25-ESC-d0-BAF155-exp1 299 bp overlap
ChIP HS-SY-2 GSE108025.SMARCC1.HS-SY-2 337 bp overlap
ChIP HS-SY-2 GSE108025.SMARCC1.HS-SY-2 380 bp overlap
SP1 1 dataset
Motif DE_12h DE_12h-SP1_MA0079.5 9 bp overlap
SP2 1 dataset
Motif DE_12h DE_12h-SP2_MA0516.3 9 bp overlap
SREBP2 2 datasets
ChIP HCC70 GSE126380.SREBP2.HCC70 621 bp overlap
ChIP HCC70_XY018 GSE126380.SREBP2.HCC70_XY018 650 bp overlap
SS18 1 dataset
ChIP Aska-SS GSE108025.SS18.Aska-SS 363 bp overlap
STAT3 1 dataset
ChIP WA01 ERP004237.STAT3.WA01 321 bp overlap
SUZ12 9 datasets
ChIP GM12878 ENCFF498QAM 371 bp overlap
ChIP H1 ENCFF881NFR 835 bp overlap
ChIP K-562 ENCSR000AUC.SUZ12.K-562 628 bp overlap
ChIP K-562 ENCSR000AUC.SUZ12.K-562 92 bp overlap
ChIP NT2-D1 GSE101538.SUZ12.NT2-D1 835 bp overlap
ChIP NT2/D1 ENCFF574SXS 259 bp overlap
ChIP NT2/D1 ENCFF574SXS 347 bp overlap
ChIP NT2/D1 ENCFF574SXS 237 bp overlap
ChIP WA01 ENCSR000EUQ.SUZ12.WA01 835 bp overlap
Spi1 1 dataset
Motif DE_12h DE_12h-Spi1_MA0080.7 13 bp overlap
TAF15 2 datasets
ChIP Hep-G2 GSE120104.TAF15.Hep-G2 161 bp overlap
ChIP Hep-G2 ENCSR825MZS.TAF15.Hep-G2 149 bp overlap
TCF12 2 datasets
ChIP WA01 ENCSR000BIT.TCF12.WA01 104 bp overlap
ChIP WA01 ENCSR000BIT.TCF12.WA01 138 bp overlap
TFAP2C 1 dataset
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 287 bp overlap
TFDP1 1 dataset
Motif DE_12h DE_12h-TFDP1_MA1122.2 8 bp overlap
TRIM25 1 dataset
ChIP BT-549 GSE79588.TRIM25.BT-549 576 bp overlap
TRIM28 1 dataset
ChIP HCT-116 GSE72622.TRIM28.HCT-116 195 bp overlap
USF1 1 dataset
Motif DE_12h DE_12h-USF1_MA0093.4 10 bp overlap
ZBED4 1 dataset
Motif DE_12h DE_12h-ZBED4_MA2328.1 10 bp overlap
ZBTB24 1 dataset
Motif DE_12h DE_12h-ZBTB24_MA2330.1 10 bp overlap
ZBTB48 1 dataset
ChIP U2OS GSE96776.ZBTB48.U2OS 835 bp overlap
ZEB1 1 dataset
Motif DE_12h DE_12h-ZEB1_MA0103.4 6 bp overlap
ZNF417 1 dataset
Motif DE_12h DE_12h-ZNF417_MA1727.2 7 bp overlap
ZNF445 1 dataset
ChIP HEK293T GSE78099.ZNF445.HEK293T 200 bp overlap
ZNF519 1 dataset
ChIP HEK293T GSE78099.ZNF519.HEK293T 166 bp overlap
ZNF528 1 dataset
Motif DE_12h DE_12h-ZNF528_MA1597.1 17 bp overlap
ZNF547 1 dataset
Motif DE_12h DE_12h-ZNF547_MA2334.1 13 bp overlap
ZNF558 1 dataset
Motif DE_12h DE_12h-ZNF558_MA2335.1 29 bp overlap
ZNF669 1 dataset
Motif DE_12h DE_12h-ZNF669_MA1985.1 15 bp overlap
ZNF701 1 dataset
Motif DE_12h DE_12h-ZNF701_MA1987.2 17 bp overlap
ZNF740 1 dataset
Motif DE_12h DE_12h-ZNF740_MA0753.3 10 bp overlap
Zfp961 1 dataset
Motif DE_12h DE_12h-Zfp961_MA2126.1 8 bp overlap
Zfx 1 dataset
Motif DE_12h DE_12h-Zfx_MA0146.3 10 bp overlap