chr13 : 82,597,791 82,598,320
529 bp 151 TFs 0 linked genes
This 529 bp open chromatin element has no linked target genes and is bound by 151 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr13:82,592,791 – 82,603,320
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
151 transcription factors
Source
Cell type
ALX3 1 dataset
Motif DE_12h DE_12h-ALX3_MA0634.2 6 bp overlap
ATF2 2 datasets
ChIP H1 ENCFF295GZO 443 bp overlap
ChIP WA01 ENCSR000BQU.ATF2.WA01 322 bp overlap
Arid3a 1 dataset
Motif DE_12h DE_12h-Arid3a_MA0151.1 6 bp overlap
BARX1 1 dataset
Motif DE_12h DE_12h-BARX1_MA0875.2 6 bp overlap
BCL11A 4 datasets
ChIP H1 ENCFF833IPY 145 bp overlap
ChIP H1 ENCFF836SSR 177 bp overlap
ChIP WA01 ENCSR000BIP.BCL11A.WA01 281 bp overlap
ChIP WA01 ENCSR000BMJ.BCL11A.WA01 233 bp overlap
BCL6B 1 dataset
Motif DE_12h DE_12h-BCL6B_MA0731.1 17 bp overlap
BCOR 4 datasets
ChIP WA01 GSE104690.BCOR.WA01 343 bp overlap
ChIP WA01_KDM2B_KO GSE104690.BCOR.WA01_KDM2B_KO 327 bp overlap
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 197 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 377 bp overlap
BSX 1 dataset
Motif DE_12h DE_12h-BSX_MA0876.2 6 bp overlap
CEBPB 1 dataset
ChIP WA01 ENCSR000EBV.CEBPB.WA01 139 bp overlap
CHD7 2 datasets
ChIP H1 ENCFF126NLU 311 bp overlap
ChIP WA01 ENCSR000AVA.CHD7.WA01 237 bp overlap
CREB1 1 dataset
ChIP GM23338 ENCSR214ZAV.CREB1.GM23338 199 bp overlap
DLX1 1 dataset
Motif DE_12h DE_12h-DLX1_MA0879.3 6 bp overlap
DLX6 1 dataset
Motif DE_12h DE_12h-DLX6_MA0882.2 6 bp overlap
DRGX 1 dataset
Motif DE_12h DE_12h-DRGX_MA1481.2 6 bp overlap
DUX4 1 dataset
Motif DE_12h DE_12h-DUX4_MA0468.1 11 bp overlap
Dlx2 1 dataset
Motif DE_12h DE_12h-Dlx2_MA0885.3 8 bp overlap
Dlx3 1 dataset
Motif DE_12h DE_12h-Dlx3_MA0880.2 6 bp overlap
Dlx4 1 dataset
Motif DE_12h DE_12h-Dlx4_MA0881.2 6 bp overlap
Dlx5 1 dataset
Motif DE_12h DE_12h-Dlx5_MA1476.3 8 bp overlap
EBF1 1 dataset
Motif DE_12h DE_12h-EBF1_MA0154.5 11 bp overlap
EBF3 1 dataset
Motif DE_12h DE_12h-EBF3_MA1637.2 9 bp overlap
EGR1 2 datasets
ChIP H1 ENCFF451BLH 261 bp overlap
ChIP WA01 ENCSR000BJA.EGR1.WA01 276 bp overlap
EMX1 1 dataset
Motif DE_12h DE_12h-EMX1_MA0612.3 6 bp overlap
EMX2 1 dataset
Motif DE_12h DE_12h-EMX2_MA0886.2 6 bp overlap
EN1 1 dataset
Motif DE_12h DE_12h-EN1_MA0027.3 6 bp overlap
EN2 1 dataset
Motif DE_12h DE_12h-EN2_MA0642.3 7 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 140 bp overlap
EP300 2 datasets
ChIP H1 ENCFF927IYK 297 bp overlap
ChIP WA01 ENCSR000BKK.EP300.WA01 298 bp overlap
ETS1 1 dataset
ChIP hESC ENCSR534VHI.ETS1.hESC 139 bp overlap
EVX1 1 dataset
Motif DE_12h DE_12h-EVX1_MA0887.2 6 bp overlap
EVX2 1 dataset
Motif DE_12h DE_12h-EVX2_MA0888.2 6 bp overlap
Ebf2 1 dataset
Motif DE_12h DE_12h-Ebf2_MA1604.2 9 bp overlap
Ebf4 1 dataset
Motif DE_12h DE_12h-Ebf4_MA2122.1 11 bp overlap
FEZF2 1 dataset
Motif DE_12h DE_12h-FEZF2_MA2341.1 8 bp overlap
FIGLA 1 dataset
Motif DE_12h DE_12h-FIGLA_MA0820.2 6 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 350 bp overlap
ChIP DE DE-FOXA2-2 347 bp overlap
FOXB1 1 dataset
Motif DE_12h DE_12h-FOXB1_MA0845.1 11 bp overlap
FOXP1 1 dataset
ChIP H9 GSE31006.FOXP1.H9 158 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 372 bp overlap
ChIP DE DE-GATA4-2 373 bp overlap
GATA6 4 datasets
ChIP DE DE-GATA6-1 243 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 268 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 274 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 265 bp overlap
GBX1 1 dataset
Motif DE_12h DE_12h-GBX1_MA0889.2 7 bp overlap
GBX2 1 dataset
Motif DE_12h DE_12h-GBX2_MA0890.2 6 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 419 bp overlap
GSX1 1 dataset
Motif DE_12h DE_12h-GSX1_MA0892.2 6 bp overlap
GSX2 1 dataset
Motif DE_12h DE_12h-GSX2_MA0893.3 7 bp overlap
GTF2I 1 dataset
ChIP WTC11 ENCFF255XXZ 258 bp overlap
GTF3C2 1 dataset
ChIP H9 GSE94418.GTF3C2.H9 296 bp overlap
HDAC2 3 datasets
ChIP H1 ENCFF939VKA 237 bp overlap
ChIP WA01 ENCSR000AVB.HDAC2.WA01 382 bp overlap
ChIP WA01 ENCSR000BNR.HDAC2.WA01 287 bp overlap
HDAC6 1 dataset
ChIP WA01 ENCSR000ATQ.HDAC6.WA01 125 bp overlap
HESX1 1 dataset
Motif DE_12h DE_12h-HESX1_MA0894.2 6 bp overlap
HOXA1 1 dataset
Motif DE_12h DE_12h-HOXA1_MA1495.2 6 bp overlap
HOXA2 1 dataset
Motif DE_12h DE_12h-HOXA2_MA0900.3 6 bp overlap
HOXA3 1 dataset
Motif DE_12h DE_12h-HOXA3_MA2119.1 7 bp overlap
HOXA6 1 dataset
Motif DE_12h DE_12h-HOXA6_MA1497.2 7 bp overlap
HOXA7 1 dataset
Motif DE_12h DE_12h-HOXA7_MA1498.3 6 bp overlap
HOXB1 1 dataset
Motif DE_12h DE_12h-HOXB1_MA2093.1 7 bp overlap
HOXB2 1 dataset
Motif DE_12h DE_12h-HOXB2_MA0902.3 6 bp overlap
HOXB3 1 dataset
Motif DE_12h DE_12h-HOXB3_MA0903.2 6 bp overlap
HOXB5 1 dataset
Motif DE_12h DE_12h-HOXB5_MA0904.3 6 bp overlap
HOXB6 1 dataset
Motif DE_12h DE_12h-HOXB6_MA1500.2 7 bp overlap
HOXB7 1 dataset
Motif DE_12h DE_12h-HOXB7_MA1501.2 7 bp overlap
HOXB8 1 dataset
Motif DE_12h DE_12h-HOXB8_MA1502.2 7 bp overlap
HOXC8 1 dataset
Motif DE_12h DE_12h-HOXC8_MA1505.2 6 bp overlap
HOXD8 1 dataset
Motif DE_12h DE_12h-HOXD8_MA0910.3 7 bp overlap
IRF7 1 dataset
Motif DE_12h DE_12h-IRF7_MA0772.2 13 bp overlap
ISL2 1 dataset
Motif DE_12h DE_12h-ISL2_MA0914.2 6 bp overlap
ISX 1 dataset
Motif DE_12h DE_12h-ISX_MA0654.2 6 bp overlap
Irf1 1 dataset
Motif DE_12h DE_12h-Irf1_MA0050.4 11 bp overlap
JUN 4 datasets
ChIP DE_D2 S02-DE-d2-JUN-exp1 248 bp overlap
ChIP ESC S34-ESC-d0-JUN-exp2 253 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 298 bp overlap
ChIP WA01 ENCSR000ECA.JUN.WA01 147 bp overlap
JUND 2 datasets
ChIP H1 ENCFF468JZD 231 bp overlap
ChIP WA01 ENCSR000BKP.JUND.WA01 170 bp overlap
KLF4 1 dataset
ChIP WA09 GSE105028.KLF4.WA09 248 bp overlap
LBX1 1 dataset
Motif DE_12h DE_12h-LBX1_MA0618.2 7 bp overlap
LBX2 1 dataset
Motif DE_12h DE_12h-LBX2_MA0699.2 6 bp overlap
LHX2 1 dataset
Motif DE_12h DE_12h-LHX2_MA0700.3 6 bp overlap
LHX5 1 dataset
Motif DE_12h DE_12h-LHX5_MA1519.2 7 bp overlap
LHX9 1 dataset
Motif DE_12h DE_12h-LHX9_MA0701.3 7 bp overlap
Lhx4 1 dataset
Motif DE_12h DE_12h-Lhx4_MA0704.2 6 bp overlap
Lhx8 1 dataset
Motif DE_12h DE_12h-Lhx8_MA0705.2 6 bp overlap
MEOX1 1 dataset
Motif DE_12h DE_12h-MEOX1_MA0661.2 7 bp overlap
MEOX2 1 dataset
Motif DE_12h DE_12h-MEOX2_MA0706.2 7 bp overlap
MIXL1 1 dataset
Motif DE_12h DE_12h-MIXL1_MA0662.2 6 bp overlap
MNX1 1 dataset
Motif DE_12h DE_12h-MNX1_MA0707.3 6 bp overlap
MSX1 1 dataset
Motif DE_12h DE_12h-MSX1_MA0666.3 6 bp overlap
MSX2 1 dataset
Motif DE_12h DE_12h-MSX2_MA0708.3 6 bp overlap
MYOD1 1 dataset
Motif DE_12h DE_12h-MYOD1_MA0499.3 9 bp overlap
MZF1 1 dataset
Motif DE_12h DE_12h-MZF1_MA0056.3 8 bp overlap
Msx3 1 dataset
Motif DE_12h DE_12h-Msx3_MA0709.2 6 bp overlap
NANOG 11 datasets
ChIP GM23338 ENCFF065NZG 311 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 203 bp overlap
ChIP H1 ENCFF747ZPQ 241 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 378 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 445 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 310 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 441 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 361 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 341 bp overlap
ChIP hESC GSE20650.NANOG.hESC 231 bp overlap
ChIP hESC GSE18292.NANOG.hESC 230 bp overlap
NIPBL 5 datasets
ChIP WA09 GSE105028.NIPBL.WA09 235 bp overlap
ChIP WA09_heat-shock GSE105028.NIPBL.WA09_heat-shock 295 bp overlap
ChIP hESC GSE64758.NIPBL.hESC 184 bp overlap
ChIP hESC_WNT3A GSE64758.NIPBL.hESC_WNT3A 230 bp overlap
ChIP hESC_WNT3A_ACTIVIN GSE64758.NIPBL.hESC_WNT3A_ACTIVIN 253 bp overlap
NKX6-2 1 dataset
Motif DE_12h DE_12h-NKX6-2_MA0675.2 6 bp overlap
Nobox 1 dataset
Motif DE_12h DE_12h-Nobox_MA0125.2 6 bp overlap
PCGF1 1 dataset
ChIP WA01 GSE104690.PCGF1.WA01 348 bp overlap
PDX1 1 dataset
Motif DE_12h DE_12h-PDX1_MA0132.3 6 bp overlap
PHOX2A 1 dataset
Motif DE_12h DE_12h-PHOX2A_MA0713.1 11 bp overlap
PHOX2B 2 datasets
Motif DE_12h DE_12h-PHOX2B_MA0681.3 12 bp overlap
Motif DE_12h DE_12h-PHOX2B_MA0681.3 12 bp overlap
POLR2A 2 datasets
ChIP GM23338 ENCFF450WCS 179 bp overlap
ChIP H1 ENCFF833NJP 189 bp overlap
POU2F1::SOX2 2 datasets
Motif DE_12h DE_12h-POU2F1SOX2_MA1962.1 17 bp overlap
Motif DE_12h DE_12h-POU2F1SOX2_MA1962.1 17 bp overlap
POU2F2 1 dataset
Motif DE_12h DE_12h-POU2F2_MA0507.3 13 bp overlap
POU4F2 1 dataset
Motif DE_12h DE_12h-POU4F2_MA0683.2 15 bp overlap
POU5F1 11 datasets
Motif DE_12h DE_12h-POU5F1_MA1115.2 7 bp overlap
ChIP GM23338 ENCFF333SNB 288 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 385 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 155 bp overlap
ChIP WA01 ENCSR000BMU.POU5F1.WA01 167 bp overlap
ChIP WA09 GSE105028.POU5F1.WA09 249 bp overlap
ChIP WA09_heat-shock GSE105028.POU5F1.WA09_heat-shock 299 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 213 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 313 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 223 bp overlap
ChIP hiPSC_3s2 GSE81899.POU5F1.hiPSC_3s2 326 bp overlap
POU6F1 1 dataset
Motif DE_12h DE_12h-POU6F1_MA0628.2 6 bp overlap
PRDM1 2 datasets
Motif DE_12h DE_12h-PRDM1_MA0508.4 7 bp overlap
Motif DE_12h DE_12h-PRDM1_MA0508.4 7 bp overlap
PRDM14 3 datasets
ChIP hESC GSE138674.PRDM14.hESC 410 bp overlap
ChIP hESC GSE22767.PRDM14.hESC 471 bp overlap
ChIP primordial-germ-cell-like-cell GSE138674.PRDM14.primordial-germ-cell-like-cell 431 bp overlap
PROP1 1 dataset
Motif DE_12h DE_12h-PROP1_MA0715.1 11 bp overlap
PRRX1 1 dataset
Motif DE_12h DE_12h-PRRX1_MA0716.2 6 bp overlap
PRRX2 1 dataset
Motif DE_12h DE_12h-PRRX2_MA0075.4 7 bp overlap
Pou5f1::Sox2 2 datasets
Motif DE_12h DE_12h-Pou5f1Sox2_MA0142.1 15 bp overlap
Motif DE_12h DE_12h-Pou5f1Sox2_MA0142.1 15 bp overlap
Prdm15 1 dataset
Motif DE_12h DE_12h-Prdm15_MA1616.2 11 bp overlap
Ptf1A 1 dataset
Motif DE_12h DE_12h-Ptf1A_MA1620.2 8 bp overlap
RARA 2 datasets
ChIP hiPSC_D2 GSE132532.RARA.hiPSC_D2 210 bp overlap
ChIP hiPSC_D4 GSE109172.RARA.hiPSC_D4 310 bp overlap
RAX 1 dataset
Motif DE_12h DE_12h-RAX_MA0718.2 6 bp overlap
RAX2 1 dataset
Motif DE_12h DE_12h-RAX2_MA0717.2 6 bp overlap
RNF2 3 datasets
ChIP WA01 GSE104690.RNF2.WA01 289 bp overlap
ChIP WA09 GSE105028.RNF2.WA09 323 bp overlap
ChIP WA09_heat-shock GSE105028.RNF2.WA09_heat-shock 308 bp overlap
RXRA 1 dataset
ChIP WA01 ENCSR000BJW.RXRA.WA01 255 bp overlap
RYBP 1 dataset
ChIP WA01 GSE104690.RYBP.WA01 236 bp overlap
SHOX 1 dataset
Motif DE_12h DE_12h-SHOX_MA0630.2 6 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 256 bp overlap
SMARCA4 3 datasets
ChIP WA09_heat-shock GSE105028.SMARCA4.WA09_heat-shock 229 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 360 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 317 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 326 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 308 bp overlap
SMARCC1 2 datasets
ChIP hiPSC GSE124903.SMARCC1.hiPSC 347 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 313 bp overlap
SNAI2 1 dataset
Motif DE_12h DE_12h-SNAI2_MA0745.3 8 bp overlap
SOX2 2 datasets
ChIP hESC GSE69479.SOX2.hESC 220 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 270 bp overlap
SP1 2 datasets
ChIP H1 ENCFF263FUH 321 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 308 bp overlap
SP4 1 dataset
ChIP WA01 ENCSR000BQV.SP4.WA01 207 bp overlap
Shox2 1 dataset
Motif DE_12h DE_12h-Shox2_MA0720.2 6 bp overlap
Spz1 1 dataset
Motif DE_12h DE_12h-Spz1_MA0111.1 11 bp overlap
Stat2 2 datasets
Motif DE_12h DE_12h-Stat2_MA1623.2 10 bp overlap
Motif DE_12h DE_12h-Stat2_MA1623.2 10 bp overlap
TBP 3 datasets
ChIP WA01 ENCSR000ECB.TBP.WA01 192 bp overlap
ChIP hESC_10h GSE122298.TBP.hESC_10h 125 bp overlap
ChIP hESC_8h GSE122298.TBP.hESC_8h 110 bp overlap
TCF12 2 datasets
ChIP H1 ENCFF203EBH 217 bp overlap
ChIP WA01 ENCSR000BIT.TCF12.WA01 346 bp overlap
TCF3 1 dataset
ChIP NPC GSE154479.TCF3.NPC 340 bp overlap
TCF7L2 1 dataset
Motif DE_12h DE_12h-TCF7L2_MA0523.2 9 bp overlap
TEAD1 1 dataset
Motif DE_12h DE_12h-TEAD1_MA0090.4 9 bp overlap
TEAD2 1 dataset
Motif DE_12h DE_12h-TEAD2_MA1121.2 7 bp overlap
TEAD3 1 dataset
Motif DE_12h DE_12h-TEAD3_MA0808.1 8 bp overlap
TEAD4 4 datasets
Motif DE_12h DE_12h-TEAD4_MA0809.3 8 bp overlap
ChIP ESC S26-ESC-d0-TEAD4-exp1 441 bp overlap
ChIP H1 ENCFF778PAX 102 bp overlap
ChIP hESC GSE99202.TEAD4.hESC 370 bp overlap
TLX2 1 dataset
Motif DE_12h DE_12h-TLX2_MA1577.2 6 bp overlap
TP53 1 dataset
ChIP hESC_DIFF GSE39912.TP53.hESC_DIFF 261 bp overlap
UNCX 1 dataset
Motif DE_12h DE_12h-UNCX_MA0721.2 6 bp overlap
USF1 1 dataset
ChIP WA01 ENCSR000BIU.USF1.WA01 134 bp overlap
VAX2 1 dataset
Motif DE_12h DE_12h-VAX2_MA0723.3 6 bp overlap
VENTX 1 dataset
Motif DE_12h DE_12h-VENTX_MA0724.1 9 bp overlap
ZBTB24 1 dataset
Motif DE_12h DE_12h-ZBTB24_MA2330.1 10 bp overlap
ZEB1 1 dataset
Motif DE_12h DE_12h-ZEB1_MA0103.4 6 bp overlap
ZFP42 1 dataset
Motif DE_12h DE_12h-ZFP42_MA1651.2 13 bp overlap
ZNF143 2 datasets
ChIP WA09 GSE105028.ZNF143.WA09 216 bp overlap
ChIP WA09_heat-shock GSE105028.ZNF143.WA09_heat-shock 305 bp overlap
ZNF324 1 dataset
Motif DE_12h DE_12h-ZNF324_MA1977.2 14 bp overlap
ZNF384 1 dataset
Motif DE_12h DE_12h-ZNF384_MA1125.2 8 bp overlap
ZNF454 1 dataset
Motif DE_12h DE_12h-ZNF454_MA1712.2 17 bp overlap
ZNF76 1 dataset
Motif DE_12h DE_12h-ZNF76_MA1716.2 17 bp overlap
ZNF768 1 dataset
Motif DE_12h DE_12h-ZNF768_MA1731.2 9 bp overlap