chr11 : 31,825,773 – 31,826,408
635 bp 114 TFs 3 linked genes
This 635 bp open chromatin element is linked to PAX6, PAUPAR, and ENSG00000285283 and is bound by 114 transcription factors.
Linked Genes
3 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
PAX6 7.8 kb Proximal Proximity
PAUPAR 9.2 kb Proximal Proximity
ENSG00000285283 9.4 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr11:31,820,773 – 31,831,408
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
114 transcription factors
Source
Cell type
AFF4 1 dataset
ChIP HeLa_EGF GSE40632.AFF4.HeLa_EGF 202 bp overlap
AR 1 dataset
ChIP prostate_fetal-fibroblast GSE90772.AR.prostate_fetal-fibroblast 635 bp overlap
ARNTL 1 dataset
ChIP NSC_hNP1 GSE134972.ARNTL.NSC_hNP1 308 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 635 bp overlap
Ahr::Arnt 1 dataset
Motif DE_12h DE_12h-AhrArnt_MA0006.2 5 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 410 bp overlap
BRD4 5 datasets
ChIP MCF-10A ERP003925.BRD4.MCF-10A 293 bp overlap
ChIP retina_AB1-FW13 GSE86981.BRD4.retina_AB1-FW13 488 bp overlap
ChIP retina_AB1-FW13 GSE86981.BRD4.retina_AB1-FW13 93 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 195 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 192 bp overlap
CBFB 1 dataset
ChIP ME-1 GSE46044.CBFB.ME-1 227 bp overlap
CBX2 1 dataset
ChIP K-562 ENCSR000ATU.CBX2.K-562 277 bp overlap
CBX7 1 dataset
ChIP hESC GSE133412.CBX7.hESC 180 bp overlap
CBX8 2 datasets
ChIP H1 ENCFF095JHA 344 bp overlap
ChIP K-562 ENCSR000ATW.CBX8.K-562 369 bp overlap
CDK9 1 dataset
ChIP HCT-116 GSE72622.CDK9.HCT-116 171 bp overlap
CHD1 1 dataset
ChIP hMSC-TERT GSE89179.CHD1.hMSC-TERT 205 bp overlap
CREBBP_M768 1 dataset
ChIP NCI-H3396_E2 GSE32349.CREBBP_M768.NCI-H3396_E2 96 bp overlap
CREM 1 dataset
ChIP WTC11 ENCFF209ZUE 125 bp overlap
CTBP2 1 dataset
ChIP WA01 ENCSR000EUO.CTBP2.WA01 597 bp overlap
CTCF 1 dataset
ChIP T-47D_NaCl-isotonic GSE111923.CTCF.T-47D_NaCl-isotonic 279 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF274GAT 266 bp overlap
E2F6 1 dataset
ChIP WA01 ENCSR000BSI.E2F6.WA01 211 bp overlap
EED 1 dataset
ChIP ProEs GSE59087.EED.ProEs 416 bp overlap
EGR1 1 dataset
ChIP A-375 GSE116190.EGR1.A-375 216 bp overlap
ERG 2 datasets
ChIP AMLPZ12 GSE23730.ERG.AMLPZ12 266 bp overlap
ChIP SKNO-1 GSE23730.ERG.SKNO-1 194 bp overlap
ESR1 3 datasets
ChIP Ishikawa_siNTC-96h GSE129803.ESR1.Ishikawa_siNTC-96h 218 bp overlap
ChIP MCF-7_Y537S_DMSO GSE148277.ESR1.MCF-7_Y537S_DMSO 249 bp overlap
ChIP MDA-MB-231_LQ_45min GSE95121.ESR1.MDA-MB-231_LQ_45min 266 bp overlap
ETS1 1 dataset
ChIP cardiomyocyte_D0 GSE129986.ETS1.cardiomyocyte_D0 189 bp overlap
EZH2 31 datasets
ChIP A673 ENCFF790MVL 635 bp overlap
ChIP A673 ENCFF955JRZ 635 bp overlap
ChIP B-cell ENCSR000AUZ.EZH2.B-cell 526 bp overlap
ChIP GM23248 ENCFF404ZHM 89 bp overlap
ChIP GM23248 ENCFF506FWX 136 bp overlap
ChIP GM23248 ENCFF506FWX 363 bp overlap
ChIP GM23338 ENCFF613YON 489 bp overlap
ChIP H1 ENCFF232NZA 635 bp overlap
ChIP LNCaP GSE39459.EZH2.LNCaP 367 bp overlap
ChIP astrocyte ENCFF365JTP 635 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 635 bp overlap
ChIP fibroblast of dermis ENCFF029VZK 635 bp overlap
ChIP fibroblast of lung ENCFF479BAW 77 bp overlap
ChIP hESC GSE113817.EZH2.hESC 635 bp overlap
ChIP hESC_KO GSE113817.EZH2.hESC_KO 258 bp overlap
ChIP hepatocyte ENCFF118DKH 192 bp overlap
ChIP hepatocyte ENCFF552DZB 635 bp overlap
ChIP mammary epithelial cell ENCFF224GAI 247 bp overlap
ChIP mammary epithelial cell ENCFF224GAI 254 bp overlap
ChIP myoblast_skeletal_muscle ENCSR000ARH.EZH2.myoblast_skeletal_muscle 298 bp overlap
ChIP myotube ENCFF857GWB 91 bp overlap
ChIP myotube ENCFF857GWB 289 bp overlap
ChIP neural cell ENCFF610EPB 128 bp overlap
ChIP neural progenitor cell ENCFF018MKA 635 bp overlap
ChIP neural progenitor cell ENCFF472NFV 635 bp overlap
ChIP peripheral-blood-mononuclear-cell_B-cell GSE115772.EZH2.peripheral-blood-mononuclear-cell_B-cell 436 bp overlap
ChIP prostate-cancer_HA GSE107780.EZH2.prostate-cancer_HA 170 bp overlap
ChIP prostate-cancer_HA GSE107780.EZH2.prostate-cancer_HA 301 bp overlap
ChIP prostate-cancer_plko GSE107780.EZH2.prostate-cancer_plko 209 bp overlap
ChIP prostate-cancer_shEZH2 GSE107780.EZH2.prostate-cancer_shEZH2 210 bp overlap
ChIP skeletal muscle myoblast ENCFF338LNF 206 bp overlap
FOXA1 2 datasets
ChIP LNCaP_S2101-4H GSE114266.FOXA1.LNCaP_S2101-4H 149 bp overlap
ChIP breast-cancer_heregulin GSE101407.FOXA1.breast-cancer_heregulin 518 bp overlap
FOXA2 1 dataset
ChIP BJ1-hTERT_FoxHnf1aCoExp GSE90454.FOXA2.BJ1-hTERT_FoxHnf1aCoExp 308 bp overlap
Foxn1 1 dataset
Motif DE_12h DE_12h-Foxn1_MA1684.1 6 bp overlap
GABPA 1 dataset
ChIP WA01 ENCSR000BIW.GABPA.WA01 152 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 296 bp overlap
HCFC1R1 1 dataset
ChIP cartilage GSE100311.HCFC1R1.cartilage 588 bp overlap
HIF1A 1 dataset
ChIP BEAS-2B_arsenic GSE145834.HIF1A.BEAS-2B_arsenic 300 bp overlap
JARID2 5 datasets
ChIP AMIPS6 GSE48516.JARID2.AMIPS6 599 bp overlap
ChIP EDOMIPS2 GSE48516.JARID2.EDOMIPS2 635 bp overlap
ChIP MRC-5_IPS25 GSE48516.JARID2.MRC-5_IPS25 438 bp overlap
ChIP UTEIPS4 GSE48516.JARID2.UTEIPS4 155 bp overlap
ChIP hESC GSE133412.JARID2.hESC 175 bp overlap
JUN 2 datasets
ChIP HUES-8 GSE109524.JUN.HUES-8 109 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 310 bp overlap
KDM1A 2 datasets
ChIP H1 ENCFF696SGD 505 bp overlap
ChIP H1 ENCFF696SGD 340 bp overlap
KDM4A 3 datasets
ChIP H1 ENCFF078LED 610 bp overlap
ChIP WA01 ENCSR000AVC.KDM4A.WA01 380 bp overlap
ChIP hiPSC_IIA11 GSE106870.KDM4A.hiPSC_IIA11 301 bp overlap
KDM5B 1 dataset
ChIP SUM185_SHCTCF GSE46055.KDM5B.SUM185_SHCTCF 122 bp overlap
KLF1 2 datasets
Motif DE_12h DE_12h-KLF1_MA0493.3 8 bp overlap
Motif DE_12h DE_12h-KLF1_MA0493.3 8 bp overlap
KLF10 2 datasets
Motif DE_12h DE_12h-KLF10_MA1511.2 9 bp overlap
Motif DE_12h DE_12h-KLF10_MA1511.2 9 bp overlap
KLF12 2 datasets
Motif DE_12h DE_12h-KLF12_MA0742.2 9 bp overlap
Motif DE_12h DE_12h-KLF12_MA0742.2 9 bp overlap
KLF14 1 dataset
Motif DE_12h DE_12h-KLF14_MA0740.2 9 bp overlap
KLF15 1 dataset
Motif DE_12h DE_12h-KLF15_MA1513.2 8 bp overlap
KLF2 2 datasets
Motif DE_12h DE_12h-KLF2_MA1515.2 8 bp overlap
Motif DE_12h DE_12h-KLF2_MA1515.2 8 bp overlap
KLF3 3 datasets
Motif DE_12h DE_12h-KLF3_MA1516.2 10 bp overlap
Motif DE_12h DE_12h-KLF3_MA1516.2 10 bp overlap
ChIP keratinocyte GSE140991.KLF3.keratinocyte 326 bp overlap
KLF4 3 datasets
Motif DE_12h DE_12h-KLF4_MA0039.5 8 bp overlap
Motif DE_12h DE_12h-KLF4_MA0039.5 8 bp overlap
ChIP hiPSC GSE56567.KLF4.hiPSC 219 bp overlap
KLF5 3 datasets
Motif DE_12h DE_12h-KLF5_MA0599.1 10 bp overlap
Motif DE_12h DE_12h-KLF5_MA0599.1 10 bp overlap
Motif DE_12h DE_12h-KLF5_MA0599.1 10 bp overlap
KLF6 2 datasets
Motif DE_12h DE_12h-KLF6_MA1517.2 9 bp overlap
Motif DE_12h DE_12h-KLF6_MA1517.2 9 bp overlap
KLF7 1 dataset
Motif DE_12h DE_12h-KLF7_MA1959.2 8 bp overlap
KLF9 1 dataset
Motif DE_12h DE_12h-KLF9_MA1107.3 11 bp overlap
MAF1 1 dataset
ChIP THP-1_macrophage_PMA GSE96800.MAF1.THP-1_macrophage_PMA 193 bp overlap
MED1 2 datasets
ChIP HCT-116 GSE121798.MED1.HCT-116 271 bp overlap
ChIP HCT-116_shLuc_thaps GSE121798.MED1.HCT-116_shLuc_thaps 327 bp overlap
MTF2 1 dataset
ChIP DU145_SH4 GSE135623.MTF2.DU145_SH4 209 bp overlap
MYC 1 dataset
ChIP GEN2-2 GSE70275.MYC.GEN2-2 83 bp overlap
NANOG 1 dataset
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 343 bp overlap
NCAPH2 1 dataset
ChIP HEK293 GSE97540.NCAPH2.HEK293 267 bp overlap
NELFE 1 dataset
ChIP HeLa GSE125534.NELFE.HeLa 175 bp overlap
NR2F2 1 dataset
ChIP MCF-7_Veh GSE132432.NR2F2.MCF-7_Veh 306 bp overlap
NRF1 4 datasets
ChIP K-562 ENCSR837EYC.NRF1.K-562 161 bp overlap
ChIP K-562_Ab_R157-1-3D4 GSE97661.NRF1.K-562_Ab_R157-1-3D4 132 bp overlap
ChIP K-562_Ab_R157-1-3H3 GSE97661.NRF1.K-562_Ab_R157-1-3H3 109 bp overlap
ChIP WA01 ENCSR000ECC.NRF1.WA01 108 bp overlap
Nrf1 1 dataset
Motif DE_12h DE_12h-Nrf1_MA0506.3 12 bp overlap
OGG1 1 dataset
ChIP HEK293_15min GSE89017.OGG1.HEK293_15min 417 bp overlap
OLIG2 1 dataset
ChIP brain-prefrontal-cortex_2018006 GSE129039.OLIG2.brain-prefrontal-cortex_2018006 238 bp overlap
PCBP1 2 datasets
ChIP Hep-G2 ENCSR872EVQ.PCBP1.Hep-G2 171 bp overlap
ChIP Hep-G2 GSE120104.PCBP1.Hep-G2 171 bp overlap
PLAG1 1 dataset
ChIP K-562 GSE111469.PLAG1.K-562 204 bp overlap
POU2F1 2 datasets
ChIP T-47D GSE148277.POU2F1.T-47D 199 bp overlap
ChIP T-47D_D538G GSE148277.POU2F1.T-47D_D538G 305 bp overlap
POU5F1 4 datasets
ChIP BG03 GSE21614.POU5F1.BG03 153 bp overlap
ChIP DE_D1 DED1-OCT4_Batch_II 606 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 232 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 635 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 533 bp overlap
RBBP5 2 datasets
ChIP WA01 ENCSR000AQC.RBBP5.WA01 238 bp overlap
ChIP WA01 ENCSR000AQC.RBBP5.WA01 223 bp overlap
RBM39 1 dataset
ChIP Hep-G2 GSE120104.RBM39.Hep-G2 111 bp overlap
RELA 2 datasets
ChIP KB GSE52469.RELA.KB 174 bp overlap
ChIP KB_IL GSE52469.RELA.KB_IL 192 bp overlap
RING1 1 dataset
ChIP SYO-1_shCt GSE139053.RING1.SYO-1_shCt 379 bp overlap
RNF2 2 datasets
ChIP H1 ENCFF239FFS 635 bp overlap
ChIP K-562 ENCSR138FUZ.RNF2.K-562 120 bp overlap
RORC 2 datasets
ChIP HCC70 GSE126380.RORC.HCC70 290 bp overlap
ChIP HCC70_XY018 GSE126380.RORC.HCC70_XY018 301 bp overlap
RREB1 1 dataset
Motif DE_12h DE_12h-RREB1_MA0073.2 19 bp overlap
RXR 1 dataset
ChIP TSU-1621MT GSE60477.RXR.TSU-1621MT 236 bp overlap
SAP30 1 dataset
ChIP WA01 ENCSR000ATR.SAP30.WA01 275 bp overlap
SIN3A 2 datasets
ChIP H1 ENCFF042ZSL 159 bp overlap
ChIP hiPSC_IB12 GSE106870.SIN3A.hiPSC_IB12 162 bp overlap
SIRT6 1 dataset
ChIP SK-MEL-239_L-C-B GSE102813.SIRT6.SK-MEL-239_L-C-B 190 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 342 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 123 bp overlap
SMARCA4 1 dataset
ChIP Aska-SS GSE108025.SMARCA4.Aska-SS 635 bp overlap
SMARCC1 2 datasets
ChIP SYO-1_shCt GSE139053.SMARCC1.SYO-1_shCt 324 bp overlap
ChIP SYO-1_shRING1A-B GSE139053.SMARCC1.SYO-1_shRING1A-B 368 bp overlap
SP2 1 dataset
Motif DE_12h DE_12h-SP2_MA0516.3 9 bp overlap
SP3 1 dataset
Motif DE_12h DE_12h-SP3_MA0746.3 11 bp overlap
SP4 2 datasets
Motif DE_12h DE_12h-SP4_MA0685.2 9 bp overlap
ChIP WA01 ENCSR000BQV.SP4.WA01 186 bp overlap
SP5 1 dataset
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
SPI1 1 dataset
ChIP primary-neutrophil_donorE GSE128834.SPI1.primary-neutrophil_donorE 97 bp overlap
SREBF1 1 dataset
Motif DE_12h DE_12h-SREBF1_MA0595.1 10 bp overlap
SREBF2 1 dataset
Motif DE_12h DE_12h-SREBF2_MA0596.1 10 bp overlap
SREBP2 2 datasets
ChIP HCC70 GSE126380.SREBP2.HCC70 288 bp overlap
ChIP HCC70_XY018 GSE126380.SREBP2.HCC70_XY018 270 bp overlap
SS18 2 datasets
ChIP Aska-SS_BAF47KO1 GSE108025.SS18.Aska-SS_BAF47KO1 589 bp overlap
ChIP SYO-1 GSE108025.SS18.SYO-1 556 bp overlap
SS18-SSX 1 dataset
ChIP fibroblast_78aa-SSX-Tail GSE139053.SS18-SSX.fibroblast_78aa-SSX-Tail 370 bp overlap
STAT3 1 dataset
ChIP WA01 ERP004237.STAT3.WA01 225 bp overlap
SUPT5H 1 dataset
ChIP HeLa GSE125534.SUPT5H.HeLa 289 bp overlap
SUZ12 12 datasets
ChIP GM12878 ENCSR744XTG.SUZ12.GM12878 273 bp overlap
ChIP H1 ENCFF881NFR 635 bp overlap
ChIP HEK293T_PCGF1356fl GSE119618.SUZ12.HEK293T_PCGF1356fl 88 bp overlap
ChIP HEK293T_PCGF135fl_OHT GSE119618.SUZ12.HEK293T_PCGF135fl_OHT 110 bp overlap
ChIP K-562 ENCSR000AUC.SUZ12.K-562 179 bp overlap
ChIP LNCaP GSE39459.SUZ12.LNCaP 633 bp overlap
ChIP NCCIT GSE71675.SUZ12.NCCIT 403 bp overlap
ChIP NCCIT GSE71675.SUZ12.NCCIT 148 bp overlap
ChIP ProEs GSE59087.SUZ12.ProEs 184 bp overlap
ChIP SYO-1_shCt GSE139053.SUZ12.SYO-1_shCt 631 bp overlap
ChIP WA01 ENCSR000ATS.SUZ12.WA01 351 bp overlap
ChIP WA01 ENCSR000EUQ.SUZ12.WA01 183 bp overlap
TFAP2A 2 datasets
Motif DE_12h DE_12h-TFAP2A_MA0003.5 9 bp overlap
Motif DE_12h DE_12h-TFAP2A_MA0810.2 11 bp overlap
TFAP2B 2 datasets
Motif DE_12h DE_12h-TFAP2B_MA0811.2 11 bp overlap
Motif DE_12h DE_12h-TFAP2B_MA0812.2 9 bp overlap
TFAP2C 3 datasets
Motif DE_12h DE_12h-TFAP2C_MA0524.3 11 bp overlap
Motif DE_12h DE_12h-TFAP2C_MA0814.3 9 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 635 bp overlap
TFAP2E 1 dataset
Motif DE_12h DE_12h-TFAP2E_MA1569.2 9 bp overlap
TFIIIC 1 dataset
ChIP HEK293 GSE119418.TFIIIC.HEK293 300 bp overlap
TP63 1 dataset
ChIP keratinocyte GSE33571.TP63.keratinocyte 134 bp overlap
TRIM25 1 dataset
ChIP BT-549 GSE79588.TRIM25.BT-549 186 bp overlap
TRIM28 1 dataset
ChIP AF22 GSE84259.TRIM28.AF22 371 bp overlap
WDR5 1 dataset
ChIP SMMC-7721 GSE126982.WDR5.SMMC-7721 349 bp overlap
Wt1 1 dataset
Motif DE_12h DE_12h-Wt1_MA1627.2 10 bp overlap
ZBTB33 3 datasets
ChIP K-562 ENCSR876GXA.ZBTB33.K-562 68 bp overlap
ChIP K562 ENCFF427SDV 114 bp overlap
ChIP K562 ENCFF875HLX 69 bp overlap
ZBTB48 1 dataset
ChIP U2OS_ZBTB48-KO GSE96776.ZBTB48.U2OS_ZBTB48-KO 315 bp overlap
ZBTB7A 1 dataset
ChIP Ishikawa ENCSR000BSZ.ZBTB7A.Ishikawa 66 bp overlap
ZFP36 1 dataset
ChIP K-562 ENCSR776CYN.ZFP36.K-562 118 bp overlap
ZFX 1 dataset
ChIP HEK293T_FLAG GSE145160.ZFX.HEK293T_FLAG 596 bp overlap
ZKSCAN5 1 dataset
Motif DE_12h DE_12h-ZKSCAN5_MA1652.2 9 bp overlap
ZNF257 1 dataset
Motif DE_12h DE_12h-ZNF257_MA1710.2 10 bp overlap
ZNF320 1 dataset
Motif DE_12h DE_12h-ZNF320_MA1976.2 20 bp overlap
ZNF454 1 dataset
Motif DE_12h DE_12h-ZNF454_MA1712.2 17 bp overlap
ZNF524 1 dataset
Motif DE_12h DE_12h-ZNF524_MA2096.1 9 bp overlap
Zfx 1 dataset
Motif DE_12h DE_12h-Zfx_MA0146.3 10 bp overlap
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