chr11 : 31,823,464 – 31,824,163
699 bp 97 TFs 3 linked genes
This 699 bp open chromatin element is linked to ENSG00000285283, PAX6, and PAUPAR and is bound by 97 transcription factors.
Linked Genes
3 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ENSG00000285283 7.1 kb Proximal Proximity
PAX6 8.5 kb Proximal Proximity
PAUPAR 9.3 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr11:31,818,464 – 31,829,163
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
97 transcription factors
Source
Cell type
AR 1 dataset
ChIP prostate_fetal-fibroblast GSE90772.AR.prostate_fetal-fibroblast 319 bp overlap
ARID1A 1 dataset
ChIP HAP1 GSE108387.ARID1A.HAP1 255 bp overlap
ASH2L 3 datasets
ChIP H1 ENCFF399KAM 608 bp overlap
ChIP H1 ENCFF399KAM 311 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 699 bp overlap
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 196 bp overlap
BCOR 3 datasets
ChIP WA01 GSE104690.BCOR.WA01 699 bp overlap
ChIP WA01_KDM2B_KO GSE104690.BCOR.WA01_KDM2B_KO 550 bp overlap
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 584 bp overlap
BRD1 2 datasets
ChIP HUES-64 GSE104059.BRD1.HUES-64 190 bp overlap
ChIP HUES-64 GSE104059.BRD1.HUES-64 452 bp overlap
BRD4 3 datasets
ChIP HAP1 GSE108387.BRD4.HAP1 305 bp overlap
ChIP retina_AB1-FW20 GSE86981.BRD4.retina_AB1-FW20 637 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 235 bp overlap
CBFB 1 dataset
ChIP ME-1 GSE46044.CBFB.ME-1 212 bp overlap
CBX2 2 datasets
ChIP HepG2 ENCFF838BNI 55 bp overlap
ChIP K-562 ENCSR000ATU.CBX2.K-562 260 bp overlap
CBX4 1 dataset
ChIP hMSC GSE117084.CBX4.hMSC 226 bp overlap
CBX8 3 datasets
ChIP H1 ENCFF095JHA 490 bp overlap
ChIP K-562 ENCSR000ATW.CBX8.K-562 151 bp overlap
ChIP K562 ENCFF485TBL 325 bp overlap
CHD1 3 datasets
ChIP H1 ENCFF998XEK 651 bp overlap
ChIP H1 ENCFF998XEK 457 bp overlap
ChIP WA01 ENCSR000AQK.CHD1.WA01 699 bp overlap
CHD7 3 datasets
ChIP H1 ENCFF126NLU 372 bp overlap
ChIP WA01 ENCSR000AVA.CHD7.WA01 222 bp overlap
ChIP WA01 ENCSR000AVA.CHD7.WA01 150 bp overlap
CRY1 1 dataset
ChIP U2OS GSE44236.CRY1.U2OS 207 bp overlap
CTBP2 1 dataset
ChIP WA01 ENCSR000EUO.CTBP2.WA01 699 bp overlap
CTCF 2 datasets
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 320 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_1 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_1 62 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF460KDD 282 bp overlap
E2F6 2 datasets
ChIP H1 ENCFF785DWK 247 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 657 bp overlap
EGR3 1 dataset
Motif ES_0h ES_0h-EGR3_MA0732.2 11 bp overlap
EP300 1 dataset
ChIP WA01 ENCSR000BKK.EP300.WA01 178 bp overlap
ESR1 1 dataset
ChIP MCF-7_Y537S_DMSO GSE148277.ESR1.MCF-7_Y537S_DMSO 231 bp overlap
ETS1 1 dataset
ChIP cardiomyocyte_D0 GSE129986.ETS1.cardiomyocyte_D0 313 bp overlap
ETV1 2 datasets
Motif DE_12h DE_12h-ETV1_MA0761.3 9 bp overlap
Motif ES_0h ES_0h-ETV1_MA0761.3 9 bp overlap
EZH2 21 datasets
ChIP GM23338 ENCFF613YON 139 bp overlap
ChIP GM23338 ENCFF886DXX 357 bp overlap
ChIP H1 ENCFF232NZA 699 bp overlap
ChIP HUVEC-C_VEGF_12h GSE109625.EZH2.HUVEC-C_VEGF_12h 680 bp overlap
ChIP HUVEC-C_VEGF_1h GSE109625.EZH2.HUVEC-C_VEGF_1h 629 bp overlap
ChIP HUVEC-C_VEGF_4h GSE109625.EZH2.HUVEC-C_VEGF_4h 588 bp overlap
ChIP Hep-3B2-1-7 GSE128137.EZH2.Hep-3B2-1-7 135 bp overlap
ChIP LNCaP-abl GSE39459.EZH2.LNCaP-abl 536 bp overlap
ChIP LNCaP-abl GSE39459.EZH2.LNCaP-abl 89 bp overlap
ChIP SK-N-SH ENCFF657FZK 178 bp overlap
ChIP astrocyte ENCFF365JTP 699 bp overlap
ChIP astrocyte ENCFF365JTP 542 bp overlap
ChIP dermal-fibroblast_Untransformed GSE126396.EZH2.dermal-fibroblast_Untransformed 121 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 606 bp overlap
ChIP epithelial_mammary ENCSR000ARE.EZH2.epithelial_mammary 598 bp overlap
ChIP fibroblast of lung ENCFF479BAW 605 bp overlap
ChIP fibroblast of lung ENCFF479BAW 445 bp overlap
ChIP hepatocyte ENCFF118DKH 133 bp overlap
ChIP hepatocyte ENCFF552DZB 518 bp overlap
ChIP neural progenitor cell ENCFF018MKA 382 bp overlap
ChIP neural progenitor cell ENCFF472NFV 699 bp overlap
FOXA2 1 dataset
ChIP BJ1-hTERT_FoxHnf1aCoExp GSE90454.FOXA2.BJ1-hTERT_FoxHnf1aCoExp 302 bp overlap
FOXJ2::ELF1 1 dataset
Motif DE_12h DE_12h-FOXJ2ELF1_MA1952.2 11 bp overlap
GABPA 1 dataset
ChIP WA01 ENCSR000BIW.GABPA.WA01 423 bp overlap
GATA2 1 dataset
ChIP ME-1_CBFB-MYH11-KD GSE117138.GATA2.ME-1_CBFB-MYH11-KD 242 bp overlap
GATA6 1 dataset
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 105 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 241 bp overlap
HDAC2 1 dataset
ChIP WA01 ENCSR000AVB.HDAC2.WA01 135 bp overlap
HEXIM1 1 dataset
ChIP HCT-116 GSE72622.HEXIM1.HCT-116 196 bp overlap
HIF1A 1 dataset
ChIP BEAS-2B_arsenic GSE145834.HIF1A.BEAS-2B_arsenic 195 bp overlap
HIVEP1 1 dataset
ChIP Hep-G2 ENCSR697WMX.HIVEP1.Hep-G2 179 bp overlap
IKZF2 2 datasets
Motif DE_12h DE_12h-IKZF2_MA2326.1 6 bp overlap
Motif ES_0h ES_0h-IKZF2_MA2326.1 6 bp overlap
Ikzf3 2 datasets
Motif DE_12h DE_12h-Ikzf3_MA1992.2 9 bp overlap
Motif ES_0h ES_0h-Ikzf3_MA1992.2 9 bp overlap
JARID2 2 datasets
ChIP AMIPS6 GSE48516.JARID2.AMIPS6 386 bp overlap
ChIP UTEIPS7 GSE48516.JARID2.UTEIPS7 303 bp overlap
JUN 4 datasets
ChIP DE_D2 S02-DE-d2-JUN-exp1 174 bp overlap
ChIP ESC S24-ESC-d0-JUN-exp1 636 bp overlap
ChIP ESC S34-ESC-d0-JUN-exp2 258 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 634 bp overlap
KDM4A 3 datasets
ChIP H1 ENCFF078LED 679 bp overlap
ChIP H1 ENCFF078LED 477 bp overlap
ChIP WA01 ENCSR000AVC.KDM4A.WA01 507 bp overlap
KDM4B 1 dataset
ChIP K-562 ENCSR642VZY.KDM4B.K-562 179 bp overlap
KDM6B 1 dataset
ChIP CUTLL1 GSE56694.KDM6B.CUTLL1 203 bp overlap
KLF4 1 dataset
ChIP HAP1 GSE130417.KLF4.HAP1 316 bp overlap
MAX 3 datasets
ChIP H1 ENCFF914VQY 357 bp overlap
ChIP H1 ENCFF914VQY 357 bp overlap
ChIP WTC11 ENCFF223QFY 585 bp overlap
MYOG 1 dataset
ChIP RH4_Entinostat-6H GSE116344.MYOG.RH4_Entinostat-6H 247 bp overlap
NANOG 6 datasets
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 77 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 108 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 88 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 194 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 261 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 154 bp overlap
NEUROD1 1 dataset
ChIP D283-Med GSE92582.NEUROD1.D283-Med 123 bp overlap
NFATC3 2 datasets
Motif DE_12h DE_12h-NFATC3_MA0625.3 6 bp overlap
Motif ES_0h ES_0h-NFATC3_MA0625.3 6 bp overlap
Nfatc1 2 datasets
Motif DE_12h DE_12h-Nfatc1_MA0624.3 6 bp overlap
Motif ES_0h ES_0h-Nfatc1_MA0624.3 6 bp overlap
OGG1 1 dataset
ChIP HEK293 GSE89017.OGG1.HEK293 325 bp overlap
POU2F1 1 dataset
ChIP T-47D_D538G GSE148277.POU2F1.T-47D_D538G 205 bp overlap
POU5F1 7 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 468 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 288 bp overlap
ChIP WA09 GSE105028.POU5F1.WA09 178 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 166 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 250 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 302 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 108 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 607 bp overlap
PRDM9 1 dataset
Motif ES_0h ES_0h-PRDM9_MA1723.2 20 bp overlap
RAD21 4 datasets
ChIP HAP1 GSE126634.RAD21.HAP1 367 bp overlap
ChIP HAP1 GSE152721.RAD21.HAP1 293 bp overlap
ChIP HAP1_CTCF GSE126634.RAD21.HAP1_CTCF 241 bp overlap
ChIP HAP1_clone25 GSE152721.RAD21.HAP1_clone25 283 bp overlap
RBBP5 2 datasets
ChIP H1 ENCFF905HFL 635 bp overlap
ChIP WA01 ENCSR000AQC.RBBP5.WA01 699 bp overlap
RUNX1 1 dataset
ChIP Jurkat GSE85524.RUNX1.Jurkat 247 bp overlap
RXR 1 dataset
ChIP TSU-1621MT GSE60477.RXR.TSU-1621MT 198 bp overlap
SALL3 1 dataset
ChIP hiPSC GSE104863.SALL3.hiPSC 224 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8 GSE109524.SMAD2-3.HUES-8 564 bp overlap
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 398 bp overlap
SMAD3 1 dataset
ChIP BG03 GSE21614.SMAD3.BG03 115 bp overlap
SMARCA4 3 datasets
ChIP NSC GSE125033.SMARCA4.NSC 214 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 273 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 242 bp overlap
SMARCB1 2 datasets
ChIP HeLa-S3 ENCSR000EDK.SMARCB1.HeLa-S3 249 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 345 bp overlap
SMARCC1 3 datasets
ChIP Aska-SS GSE108025.SMARCC1.Aska-SS 183 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 102 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 410 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 187 bp overlap
SP1 2 datasets
ChIP H1 ENCFF263FUH 235 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 232 bp overlap
SP5 2 datasets
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
Motif ES_0h ES_0h-SP5_MA1965.2 6 bp overlap
SREBP2 2 datasets
ChIP HCC70 GSE126380.SREBP2.HCC70 305 bp overlap
ChIP HCC70_XY018 GSE126380.SREBP2.HCC70_XY018 217 bp overlap
STAT3 3 datasets
Motif DE_12h DE_12h-STAT3_MA0144.3 9 bp overlap
Motif ES_0h ES_0h-STAT3_MA0144.3 9 bp overlap
ChIP WA01 ERP004237.STAT3.WA01 228 bp overlap
SUZ12 7 datasets
ChIP Aska-SS GSE108025.SUZ12.Aska-SS 87 bp overlap
ChIP GM12878 ENCSR091BOQ.SUZ12.GM12878 500 bp overlap
ChIP H1 ENCFF507HGF 271 bp overlap
ChIP H1 ENCFF881NFR 699 bp overlap
ChIP K-562 ENCSR000AUC.SUZ12.K-562 233 bp overlap
ChIP K-562 ENCSR000AUC.SUZ12.K-562 298 bp overlap
ChIP WA01 ENCSR000ATS.SUZ12.WA01 567 bp overlap
Stat4 2 datasets
Motif DE_12h DE_12h-Stat4_MA0518.2 10 bp overlap
Motif ES_0h ES_0h-Stat4_MA0518.2 10 bp overlap
TAF1 2 datasets
ChIP WA01 ENCSR000BHO.TAF1.WA01 166 bp overlap
ChIP WA01 ENCSR000BHO.TAF1.WA01 239 bp overlap
TBP 3 datasets
ChIP H1 ENCFF859IIO 377 bp overlap
ChIP H1 ENCFF859IIO 351 bp overlap
ChIP WA01 ENCSR000ECB.TBP.WA01 405 bp overlap
TCF12 3 datasets
ChIP H1 ENCFF203EBH 142 bp overlap
ChIP WA01 ENCSR000BIT.TCF12.WA01 115 bp overlap
ChIP WA01 ENCSR000BIT.TCF12.WA01 243 bp overlap
TCF3 1 dataset
ChIP NPC GSE154479.TCF3.NPC 135 bp overlap
TEAD4 2 datasets
ChIP ESC S26-ESC-d0-TEAD4-exp1 460 bp overlap
ChIP H1 ENCFF778PAX 179 bp overlap
TET2 1 dataset
ChIP Jurkat_NCKD GSE85524.TET2.Jurkat_NCKD 213 bp overlap
TFAP2B 1 dataset
Motif DE_12h DE_12h-TFAP2B_MA0812.2 9 bp overlap
THAP1 2 datasets
Motif DE_12h DE_12h-THAP1_MA0597.3 8 bp overlap
Motif ES_0h ES_0h-THAP1_MA0597.3 8 bp overlap
TP53 1 dataset
ChIP H9_ectoderm GSE142050.TP53.H9_ectoderm 434 bp overlap
TRIM25 1 dataset
ChIP BT-549 GSE79588.TRIM25.BT-549 219 bp overlap
TRIM28 1 dataset
ChIP AF22 GSE84259.TRIM28.AF22 331 bp overlap
YY1 2 datasets
ChIP H1 ENCFF524BTL 98 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 586 bp overlap
ZBED4 1 dataset
Motif ES_0h ES_0h-ZBED4_MA2328.1 10 bp overlap
ZBTB26 1 dataset
Motif DE_12h DE_12h-ZBTB26_MA1579.2 8 bp overlap
ZNF121 1 dataset
ChIP WTC11 ENCFF291API 297 bp overlap
ZNF135 1 dataset
Motif ES_0h ES_0h-ZNF135_MA1587.1 14 bp overlap
ZNF16 1 dataset
Motif ES_0h ES_0h-ZNF16_MA1654.2 21 bp overlap
ZNF175 2 datasets
Motif DE_12h DE_12h-ZNF175_MA2332.1 9 bp overlap
Motif ES_0h ES_0h-ZNF175_MA2332.1 9 bp overlap
ZNF263 1 dataset
ChIP K-562 ENCSR000EWN.ZNF263.K-562 220 bp overlap
ZNF320 2 datasets
Motif DE_12h DE_12h-ZNF320_MA1976.2 20 bp overlap
Motif ES_0h ES_0h-ZNF320_MA1976.2 20 bp overlap
ZNF460 1 dataset
Motif DE_12h DE_12h-ZNF460_MA1596.1 16 bp overlap
ZNF462 1 dataset
ChIP GM23338 ENCFF896CCA 251 bp overlap
ZNF530 2 datasets
Motif DE_12h DE_12h-ZNF530_MA1981.2 14 bp overlap
Motif ES_0h ES_0h-ZNF530_MA1981.2 14 bp overlap
ZNF549 1 dataset
Motif ES_0h ES_0h-ZNF549_MA1728.2 8 bp overlap
ZNF770 1 dataset
Motif ES_0h ES_0h-ZNF770_MA2099.1 8 bp overlap
ZNF883 1 dataset
ChIP Hep-G2 ENCSR882YYL.ZNF883.Hep-G2 242 bp overlap
Zfp335 2 datasets
Motif DE_12h DE_12h-Zfp335_MA2002.2 7 bp overlap
Motif ES_0h ES_0h-Zfp335_MA2002.2 7 bp overlap
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