chr10 : 101,227,006 101,227,506
500 bp 95 TFs 2 linked genes
This 500 bp open chromatin element is linked to LBX1 and LBX1-AS1 and is bound by 95 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
LBX1 2.0 kb Proximal Proximity
LBX1-AS1 2.1 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr10:101,222,006 – 101,232,506
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
95 transcription factors
Source
Cell type
AGO1 2 datasets
ChIP Hep-G2 ENCSR555ZMV.AGO1.Hep-G2 65 bp overlap
ChIP Hep-G2 GSE120104.AGO1.Hep-G2 58 bp overlap
AR 1 dataset
ChIP prostate_fetal-fibroblast GSE90772.AR.prostate_fetal-fibroblast 487 bp overlap
ARID2 1 dataset
ChIP Aska-SS_shSSX GSE108025.ARID2.Aska-SS_shSSX 222 bp overlap
BCL11A 1 dataset
ChIP MCF-10A ERP003925.BCL11A.MCF-10A 194 bp overlap
BRD2 1 dataset
ChIP THP-1_iBET GSE138084.BRD2.THP-1_iBET 61 bp overlap
BRD4 10 datasets
ChIP 22Rv1_DHT-DMSO GSE118247.BRD4.22Rv1_DHT-DMSO 388 bp overlap
ChIP CLL_patient2 GSE109411.BRD4.CLL_patient2 491 bp overlap
ChIP CLL_patient2_4h_CpG_BET GSE109411.BRD4.CLL_patient2_4h_CpG_BET 500 bp overlap
ChIP CLL_patient4_4h_CpG GSE109411.BRD4.CLL_patient4_4h_CpG 206 bp overlap
ChIP COLO-741 GSE73319.BRD4.COLO-741 500 bp overlap
ChIP T-47D ERP003925.BRD4.T-47D 362 bp overlap
ChIP T-cell_iBET GSE138084.BRD4.T-cell_iBET 74 bp overlap
ChIP retina_AB1-FW20 GSE86981.BRD4.retina_AB1-FW20 271 bp overlap
ChIP retina_AB1-FW23 GSE86981.BRD4.retina_AB1-FW23 284 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 459 bp overlap
CBFB 1 dataset
ChIP ME-1 GSE46044.CBFB.ME-1 500 bp overlap
CBX2 1 dataset
ChIP HepG2 ENCFF838BNI 59 bp overlap
CBX4 1 dataset
ChIP hMSC GSE117084.CBX4.hMSC 398 bp overlap
CBX7 2 datasets
ChIP HEK293T_PCGF2fl GSE119618.CBX7.HEK293T_PCGF2fl 498 bp overlap
ChIP HEK293T_PCGF2fl_OHT GSE119618.CBX7.HEK293T_PCGF2fl_OHT 279 bp overlap
CBX8 1 dataset
ChIP H1 ENCFF095JHA 83 bp overlap
CDK9 1 dataset
ChIP HCT-116 GSE72622.CDK9.HCT-116 498 bp overlap
CHD1 2 datasets
ChIP WA01 ENCSR000AQK.CHD1.WA01 470 bp overlap
ChIP hMSC-TERT GSE89179.CHD1.hMSC-TERT 416 bp overlap
CTBP2 2 datasets
ChIP H1 ENCFF329MAX 425 bp overlap
ChIP WA01 ENCSR000EUO.CTBP2.WA01 500 bp overlap
CTCF 1 dataset
ChIP hESC_D5 GSE116862.CTCF.hESC_D5 256 bp overlap
CTCFL 1 dataset
ChIP K-562 GSE70764.CTCFL.K-562 478 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF031ISE 251 bp overlap
EP300 1 dataset
ChIP MCF-7_shCtrl GSE128445.EP300.MCF-7_shCtrl 191 bp overlap
ERG 1 dataset
ChIP CD34_NR29 GSE23730.ERG.CD34_NR29 255 bp overlap
ESR1 3 datasets
ChIP Ishikawa GSE99905.ESR1.Ishikawa 298 bp overlap
ChIP MCF-7_PaPE-1_OA GSE93510.ESR1.MCF-7_PaPE-1_OA 450 bp overlap
ChIP MCF-7_estradiol_45min_ChIP-and-reChIP GSE99626.ESR1.MCF-7_estradiol_45min_ChIP-and-reChIP 398 bp overlap
ETS1 1 dataset
ChIP cardiomyocyte_D0 GSE129986.ETS1.cardiomyocyte_D0 330 bp overlap
EZH2 23 datasets
ChIP A673 ENCFF790MVL 500 bp overlap
ChIP A673 ENCFF955JRZ 500 bp overlap
ChIP B cell ENCFF803EMO 88 bp overlap
ChIP GM23248 ENCFF404ZHM 362 bp overlap
ChIP GM23248 ENCFF506FWX 99 bp overlap
ChIP GM23248 ENCFF506FWX 82 bp overlap
ChIP GM23338 ENCFF613YON 500 bp overlap
ChIP GM23338 ENCFF886DXX 500 bp overlap
ChIP H1 ENCFF232NZA 500 bp overlap
ChIP LNCaP-abl GSE39459.EZH2.LNCaP-abl 420 bp overlap
ChIP PC-3 ENCFF855OUB 268 bp overlap
ChIP PC-3 ENCFF855OUB 241 bp overlap
ChIP astrocyte ENCFF365JTP 500 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 500 bp overlap
ChIP fibroblast of dermis ENCFF029VZK 500 bp overlap
ChIP fibroblast of lung ENCFF479BAW 116 bp overlap
ChIP hESC GSE113817.EZH2.hESC 339 bp overlap
ChIP hepatocyte ENCFF118DKH 177 bp overlap
ChIP hepatocyte ENCFF552DZB 500 bp overlap
ChIP hiPSC_WTa_RNase-neg GSE128135.EZH2.hiPSC_WTa_RNase-neg 317 bp overlap
ChIP keratinocyte ENCFF070STK 154 bp overlap
ChIP neural progenitor cell ENCFF018MKA 500 bp overlap
ChIP neural progenitor cell ENCFF472NFV 500 bp overlap
FOXA2 1 dataset
ChIP BJ1-hTERT_FoxHnf1aCoExp GSE90454.FOXA2.BJ1-hTERT_FoxHnf1aCoExp 384 bp overlap
GABPA 1 dataset
ChIP WA01 ENCSR000BIW.GABPA.WA01 210 bp overlap
GATA2 1 dataset
ChIP hiPSC_SLC6ebs GSE107639.GATA2.hiPSC_SLC6ebs 182 bp overlap
GATA6 2 datasets
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 198 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 259 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 416 bp overlap
HDAC6 1 dataset
ChIP GM12878 ENCSR933EYC.HDAC6.GM12878 345 bp overlap
HEXIM1 1 dataset
ChIP HCT-116 GSE72622.HEXIM1.HCT-116 500 bp overlap
HIF1A 1 dataset
ChIP BEAS-2B_arsenic GSE145834.HIF1A.BEAS-2B_arsenic 369 bp overlap
HIF3A 1 dataset
ChIP Hep-3B2-1-7 GSE129491.HIF3A.Hep-3B2-1-7 449 bp overlap
HNRNPC 1 dataset
ChIP Hep-G2 GSE120104.HNRNPC.Hep-G2 177 bp overlap
HNRNPLL 2 datasets
ChIP Hep-G2 ENCSR804HMZ.HNRNPLL.Hep-G2 500 bp overlap
ChIP Hep-G2 GSE120104.HNRNPLL.Hep-G2 500 bp overlap
HOXB13 1 dataset
ChIP prostate-cancer_PDX_92 GSE130408.HOXB13.prostate-cancer_PDX_92 105 bp overlap
INO80 2 datasets
ChIP Hep-G2 GSE97411.INO80.Hep-G2 179 bp overlap
ChIP Huh-7 GSE97411.INO80.Huh-7 320 bp overlap
JUN 2 datasets
ChIP ESC S24-ESC-d0-JUN-exp1 430 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 500 bp overlap
KDM5B 1 dataset
ChIP SUM185_SHCTCF GSE46055.KDM5B.SUM185_SHCTCF 274 bp overlap
KDM6B 1 dataset
ChIP CUTLL1 GSE56694.KDM6B.CUTLL1 340 bp overlap
KLF3 1 dataset
ChIP keratinocyte GSE140991.KLF3.keratinocyte 339 bp overlap
KLF5 1 dataset
ChIP HEK293_E419Q GSE88976.KLF5.HEK293_E419Q 203 bp overlap
KLF6 1 dataset
ChIP PDAC GSE64557.KLF6.PDAC 98 bp overlap
MNX1 1 dataset
ChIP Hep-G2 ENCSR108MKR.MNX1.Hep-G2 300 bp overlap
MYC 1 dataset
ChIP SK-N-SH GSE138295.MYC.SK-N-SH 98 bp overlap
MYCN 1 dataset
ChIP NB-1643 GSE138295.MYCN.NB-1643 232 bp overlap
MYOCD 1 dataset
ChIP A-549 GSE128921.MYOCD.A-549 156 bp overlap
MYOD1 1 dataset
ChIP IMR-90_GM GSE128527.MYOD1.IMR-90_GM 130 bp overlap
NANOG 3 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 500 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 434 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 474 bp overlap
NR2F2 2 datasets
ChIP MCF-7_E2 GSE132432.NR2F2.MCF-7_E2 312 bp overlap
ChIP MCF-7_Veh GSE132432.NR2F2.MCF-7_Veh 304 bp overlap
OGG1 1 dataset
ChIP HEK293_30_min GSE89017.OGG1.HEK293_30_min 387 bp overlap
PAX5 1 dataset
ChIP GM12891 ENCSR000BJH.PAX5.GM12891 124 bp overlap
PCBP1 2 datasets
ChIP K-562 ENCSR052PTN.PCBP1.K-562 312 bp overlap
ChIP K-562 GSE120104.PCBP1.K-562 266 bp overlap
PCGF2 1 dataset
ChIP HEK293T_PCGF2fl GSE119618.PCGF2.HEK293T_PCGF2fl 500 bp overlap
PDX1 1 dataset
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 308 bp overlap
POLR2A 1 dataset
ChIP sigmoid colon ENCFF725QFT 72 bp overlap
POU2F1 2 datasets
ChIP T-47D GSE148277.POU2F1.T-47D 209 bp overlap
ChIP T-47D_D538G GSE148277.POU2F1.T-47D_D538G 69 bp overlap
POU5F1 4 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 500 bp overlap
ChIP SKM-1 GSE93706.POU5F1.SKM-1 225 bp overlap
ChIP SKM-1 GSE93706.POU5F1.SKM-1 75 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 500 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 500 bp overlap
PRDM15 3 datasets
ChIP Hep-G2 ENCSR011INW.PRDM15.Hep-G2 158 bp overlap
ChIP WTC11 ENCFF108TMF 381 bp overlap
ChIP WTC11 ENCFF108TMF 180 bp overlap
RBM39 5 datasets
ChIP Hep-G2 GSE120104.RBM39.Hep-G2 421 bp overlap
ChIP Hep-G2 ENCSR339JTP.RBM39.Hep-G2 372 bp overlap
ChIP HepG2 ENCFF084YZE 410 bp overlap
ChIP HepG2 ENCFF084YZE 500 bp overlap
ChIP HepG2 ENCFF801JUH 408 bp overlap
RNF2 10 datasets
ChIP H1 ENCFF239FFS 500 bp overlap
ChIP HEK293T_PCGF1352fl GSE119618.RNF2.HEK293T_PCGF1352fl 133 bp overlap
ChIP HEK293T_PCGF1352fl_OHT GSE119618.RNF2.HEK293T_PCGF1352fl_OHT 89 bp overlap
ChIP HEK293T_PCGF1356fl GSE119618.RNF2.HEK293T_PCGF1356fl 500 bp overlap
ChIP HEK293T_PCGF1356fl_OHT GSE119618.RNF2.HEK293T_PCGF1356fl_OHT 366 bp overlap
ChIP HEK293T_PCGF135fl GSE119618.RNF2.HEK293T_PCGF135fl 197 bp overlap
ChIP HEK293T_PCGF135fl_OHT GSE119618.RNF2.HEK293T_PCGF135fl_OHT 218 bp overlap
ChIP HEK293T_PCGF135fl_OHT GSE119618.RNF2.HEK293T_PCGF135fl_OHT 206 bp overlap
ChIP HEK293T_PCGF2fl GSE119618.RNF2.HEK293T_PCGF2fl 259 bp overlap
ChIP HEK293T_RING1Bfl GSE119618.RNF2.HEK293T_RING1Bfl 265 bp overlap
RORC 2 datasets
ChIP HCC70 GSE126380.RORC.HCC70 500 bp overlap
ChIP HCC70_XY018 GSE126380.RORC.HCC70_XY018 500 bp overlap
RUNX1 1 dataset
ChIP BCP-ALL_patient1 GSE109377.RUNX1.BCP-ALL_patient1 73 bp overlap
SIRT6 1 dataset
ChIP SK-MEL-239_L-C-B GSE102813.SIRT6.SK-MEL-239_L-C-B 412 bp overlap
SMAD1 1 dataset
ChIP Hep-G2 ENCSR213QOZ.SMAD1.Hep-G2 207 bp overlap
SMAD2-3 4 datasets
ChIP HUES-8 GSE109524.SMAD2-3.HUES-8 500 bp overlap
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 359 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 500 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 418 bp overlap
SMAD2_3 2 datasets
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 348 bp overlap
ChIP ESC S33-ESC-d0-SMAD2_3-exp2 192 bp overlap
SMARCA4 2 datasets
ChIP 22Rv1 GSE115615.SMARCA4.22Rv1 500 bp overlap
ChIP 22Rv1_PTEN-KO GSE115615.SMARCA4.22Rv1_PTEN-KO 358 bp overlap
SMC3 1 dataset
ChIP neural ENCSR404BPV.SMC3.neural 100 bp overlap
SP1 1 dataset
ChIP WA01 ENCSR000BIR.SP1.WA01 137 bp overlap
SREBP2 2 datasets
ChIP HCC70 GSE126380.SREBP2.HCC70 489 bp overlap
ChIP HCC70_XY018 GSE126380.SREBP2.HCC70_XY018 500 bp overlap
SRSF7 1 dataset
ChIP Hep-G2 GSE120104.SRSF7.Hep-G2 338 bp overlap
SS18 1 dataset
ChIP Aska-SS GSE108025.SS18.Aska-SS 500 bp overlap
SS18-SSX 1 dataset
ChIP fibroblast_78aa-SSX-Tail GSE139053.SS18-SSX.fibroblast_78aa-SSX-Tail 184 bp overlap
STAT3 2 datasets
ChIP WA01 ERP004237.STAT3.WA01 206 bp overlap
ChIP WA01 ERP004237.STAT3.WA01 239 bp overlap
SUZ12 18 datasets
ChIP GM12878 ENCFF498QAM 371 bp overlap
ChIP H1 ENCFF507HGF 175 bp overlap
ChIP H1 ENCFF881NFR 500 bp overlap
ChIP HEK293T_PCGF1352fl GSE119618.SUZ12.HEK293T_PCGF1352fl 500 bp overlap
ChIP HEK293T_PCGF1352fl_OHT GSE119618.SUZ12.HEK293T_PCGF1352fl_OHT 500 bp overlap
ChIP HEK293T_PCGF1356fl GSE119618.SUZ12.HEK293T_PCGF1356fl 500 bp overlap
ChIP HEK293T_PCGF1356fl_OHT GSE119618.SUZ12.HEK293T_PCGF1356fl_OHT 500 bp overlap
ChIP HEK293T_PCGF135fl GSE119618.SUZ12.HEK293T_PCGF135fl 500 bp overlap
ChIP HEK293T_PCGF135fl_OHT GSE119618.SUZ12.HEK293T_PCGF135fl_OHT 500 bp overlap
ChIP HEK293T_PCGF2fl GSE119618.SUZ12.HEK293T_PCGF2fl 500 bp overlap
ChIP HEK293T_PCGF2fl_OHT GSE119618.SUZ12.HEK293T_PCGF2fl_OHT 500 bp overlap
ChIP K-562 ENCSR000AUC.SUZ12.K-562 254 bp overlap
ChIP K562 ENCFF397TBJ 438 bp overlap
ChIP NCCIT GSE71675.SUZ12.NCCIT 208 bp overlap
ChIP NT2-D1 GSE101538.SUZ12.NT2-D1 500 bp overlap
ChIP NT2/D1 ENCFF574SXS 205 bp overlap
ChIP NT2/D1 ENCFF574SXS 207 bp overlap
ChIP NT2/D1 ENCFF574SXS 82 bp overlap
TAF15 1 dataset
ChIP Hep-G2 GSE120104.TAF15.Hep-G2 143 bp overlap
TAL1 1 dataset
ChIP ME-1 GSE46044.TAL1.ME-1 193 bp overlap
TCF12 2 datasets
ChIP WA01 ENCSR000BIT.TCF12.WA01 152 bp overlap
ChIP WA01 ENCSR000BIT.TCF12.WA01 134 bp overlap
TCF7 1 dataset
ChIP breast-organoid_BRCA2-mut GSE113909.TCF7.breast-organoid_BRCA2-mut 297 bp overlap
TFAP2B 1 dataset
ChIP SK-N-SH ENCFF869XXQ 346 bp overlap
TFIIIC 1 dataset
ChIP HEK293 GSE119418.TFIIIC.HEK293 392 bp overlap
TP53 1 dataset
ChIP HCT-116_IR GSE60267.TP53.HCT-116_IR 314 bp overlap
TP63 3 datasets
ChIP breast-organoid GSE113909.TP63.breast-organoid 124 bp overlap
ChIP keratinocyte GSE33571.TP63.keratinocyte 96 bp overlap
ChIP keratinocyte_diff GSE33571.TP63.keratinocyte_diff 228 bp overlap
TRIM25 1 dataset
ChIP BT-549 GSE79588.TRIM25.BT-549 500 bp overlap
WDR5 1 dataset
ChIP SMMC-7721 GSE126982.WDR5.SMMC-7721 496 bp overlap
YY1 1 dataset
ChIP WA01 ENCSR000BKD.YY1.WA01 152 bp overlap
ZBTB33 3 datasets
ChIP HepG2 ENCFF778UKV 194 bp overlap
ChIP K-562 ENCSR876GXA.ZBTB33.K-562 132 bp overlap
ChIP K562 ENCFF427SDV 358 bp overlap
ZBTB48 3 datasets
ChIP U2OS GSE96776.ZBTB48.U2OS 448 bp overlap
ChIP U2OS_ZBTB48-KO GSE96776.ZBTB48.U2OS_ZBTB48-KO 209 bp overlap
ChIP U2OS_ZBTB48-KO GSE96776.ZBTB48.U2OS_ZBTB48-KO 179 bp overlap
ZFX 1 dataset
ChIP HEK293T_FLAG GSE145160.ZFX.HEK293T_FLAG 500 bp overlap
ZNF283 1 dataset
ChIP HEK293T GSE78099.ZNF283.HEK293T 279 bp overlap
ZNF800 2 datasets
ChIP Hep-G2 ENCSR701WPG.ZNF800.Hep-G2 500 bp overlap
ChIP HepG2 ENCFF840FYM 328 bp overlap