chr10 : 2,964,052 2,964,737
685 bp 87 TFs 3 linked genes
This 685 bp open chromatin element is linked to PFKP, PITRM1, and ADARB2 and is bound by 87 transcription factors.
Linked Genes
3 genes
Link type
Gene Expression Dist. to TSS Distance Link type
PFKP 103.1 kb Distal Multiome
PITRM1 208.4 kb Distal Multiome
ADARB2 1226.9 kb Distal Multiome+HiCAR
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr10:2,959,052 – 2,969,737
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
87 transcription factors
Source
Cell type
AR 1 dataset
ChIP A-375_SLNCR GSE116189.AR.A-375_SLNCR 219 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 473 bp overlap
ATF2 2 datasets
ChIP WA01 ENCSR000BQU.ATF2.WA01 134 bp overlap
ChIP WA01 ENCSR000BQU.ATF2.WA01 228 bp overlap
BCOR 2 datasets
ChIP WA01_KDM2B_KO GSE104690.BCOR.WA01_KDM2B_KO 162 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 265 bp overlap
BRD7 1 dataset
ChIP SUM159PT_JQ1 GSE131097.BRD7.SUM159PT_JQ1 108 bp overlap
CDK9 1 dataset
ChIP MOLT-4_JQ1 GSE79288.CDK9.MOLT-4_JQ1 133 bp overlap
CEBPA 1 dataset
ChIP liver ERP002306.CEBPA.liver 136 bp overlap
CHD2 1 dataset
ChIP H1 ENCFF991MKH 331 bp overlap
CHD7 2 datasets
ChIP H1 ENCFF126NLU 550 bp overlap
ChIP H1 ENCFF126NLU 508 bp overlap
CREB1 1 dataset
ChIP GM23338 ENCSR214ZAV.CREB1.GM23338 294 bp overlap
CTBP1 1 dataset
ChIP MCF-7 ENCSR636EYA.CTBP1.MCF-7 188 bp overlap
E2F6 2 datasets
ChIP H1 ENCFF785DWK 415 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 283 bp overlap
EHMT2 4 datasets
ChIP A-549 ENCSR321BJQ.EHMT2.A-549 122 bp overlap
ChIP A549 ENCFF026GWM 244 bp overlap
ChIP K-562 ENCSR175EOM.EHMT2.K-562 339 bp overlap
ChIP K562 ENCFF053BWO 221 bp overlap
EOMES 1 dataset
Motif ES_0h ES_0h-EOMES_MA0800.2 9 bp overlap
EP300 3 datasets
ChIP H1 ENCFF927IYK 297 bp overlap
ChIP WA01 ENCSR000BKK.EP300.WA01 238 bp overlap
ChIP hESC GSE17917.EP300.hESC 293 bp overlap
FOXA1 1 dataset
ChIP MCF-7_4OH-Tam GSE75201.FOXA1.MCF-7_4OH-Tam 84 bp overlap
FOXP4 1 dataset
ChIP WTC11 ENCFF708TAF 377 bp overlap
GATA3 1 dataset
ChIP T-47D GSE51274.GATA3.T-47D 159 bp overlap
HAND2 1 dataset
Motif ES_0h ES_0h-HAND2_MA1638.2 6 bp overlap
HDAC2 2 datasets
ChIP H1 ENCFF353UJQ 491 bp overlap
ChIP WA01 ENCSR000AVB.HDAC2.WA01 247 bp overlap
JUN 3 datasets
ChIP DE_D1 S40-DE-d1-JUN-exp2 279 bp overlap
ChIP ESC S24-ESC-d0-JUN-exp1 417 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 315 bp overlap
LIN54 1 dataset
Motif ES_0h ES_0h-LIN54_MA0619.2 7 bp overlap
MAX 7 datasets
ChIP H1 ENCFF914VQY 329 bp overlap
ChIP HeLa-S3 ENCSR000EZF.MAX.HeLa-S3 121 bp overlap
ChIP K562 ENCFF524IJO 244 bp overlap
ChIP MCF-7 ENCSR000BUL.MAX.MCF-7 156 bp overlap
ChIP NB4 ENCFF966MWB 178 bp overlap
ChIP WA01 ENCSR000EUP.MAX.WA01 408 bp overlap
ChIP WTC11 ENCFF223QFY 443 bp overlap
MEIS1 1 dataset
Motif ES_0h ES_0h-MEIS1_MA0498.3 5 bp overlap
MIER1 2 datasets
ChIP K-562 ENCSR426MDV.MIER1.K-562 299 bp overlap
ChIP K562 ENCFF584AYC 223 bp overlap
MIER2 1 dataset
ChIP HepG2 ENCFF997QIX 120 bp overlap
MORC2 1 dataset
ChIP H9 GSE95374.MORC2.H9 404 bp overlap
MXI1 3 datasets
ChIP H1 ENCFF963FZS 283 bp overlap
ChIP IMR-90 ENCSR000EFE.MXI1.IMR-90 108 bp overlap
ChIP WA01 ENCSR000EBR.MXI1.WA01 172 bp overlap
MYB 2 datasets
Motif ES_0h ES_0h-MYB_MA0100.4 6 bp overlap
ChIP THP-1_OG86 GSE90769.MYB.THP-1_OG86 148 bp overlap
MYCN 1 dataset
ChIP LNCaP_DHT GSE117304.MYCN.LNCaP_DHT 239 bp overlap
NANOG 11 datasets
ChIP GM23338 ENCFF065NZG 126 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 303 bp overlap
ChIP H1 ENCFF747ZPQ 179 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 685 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 603 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 386 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 685 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 685 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 602 bp overlap
ChIP hESC GSE20650.NANOG.hESC 274 bp overlap
ChIP hESC GSE18292.NANOG.hESC 251 bp overlap
NFIA 1 dataset
Motif ES_0h ES_0h-NFIA_MA0670.2 6 bp overlap
NFIX 1 dataset
Motif ES_0h ES_0h-NFIX_MA0671.2 6 bp overlap
ONECUT2 1 dataset
ChIP PC-3_normoxia GSE106305.ONECUT2.PC-3_normoxia 123 bp overlap
OTX2 1 dataset
ChIP WTC11 ENCFF634NAO 245 bp overlap
PBX3 1 dataset
Motif ES_0h ES_0h-PBX3_MA1114.2 11 bp overlap
POU2F1 2 datasets
Motif ES_0h ES_0h-POU2F1_MA0785.2 9 bp overlap
ChIP T-47D GSE148277.POU2F1.T-47D 250 bp overlap
POU2F2 1 dataset
Motif ES_0h ES_0h-POU2F2_MA0507.3 13 bp overlap
POU2F3 1 dataset
Motif ES_0h ES_0h-POU2F3_MA0627.3 9 bp overlap
POU3F1 1 dataset
Motif ES_0h ES_0h-POU3F1_MA0786.2 10 bp overlap
POU3F2 1 dataset
Motif ES_0h ES_0h-POU3F2_MA0787.1 12 bp overlap
POU3F3 1 dataset
Motif ES_0h ES_0h-POU3F3_MA0788.1 13 bp overlap
POU3F4 1 dataset
Motif ES_0h ES_0h-POU3F4_MA0789.1 9 bp overlap
POU5F1 14 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 268 bp overlap
ChIP GM23338 ENCFF333SNB 311 bp overlap
ChIP H1 ENCFF698ZAP 205 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 637 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 412 bp overlap
ChIP WA01 ENCSR000BMU.POU5F1.WA01 200 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 225 bp overlap
ChIP WA09 GSE105028.POU5F1.WA09 260 bp overlap
ChIP WA09_heat-shock GSE105028.POU5F1.WA09_heat-shock 216 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 351 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 685 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 646 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 330 bp overlap
ChIP hiPSC_3s2 GSE81899.POU5F1.hiPSC_3s2 344 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 304 bp overlap
PRRX2 1 dataset
ChIP WTC11 ENCFF107JGJ 301 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 135 bp overlap
REST 68 datasets
ChIP A-549 ENCSR892DRK.REST.A-549 513 bp overlap
ChIP A-549 ENCSR000BQP.REST.A-549 313 bp overlap
ChIP A549 ENCFF148AIS 252 bp overlap
ChIP A549 ENCFF148AIS 252 bp overlap
ChIP CD4 GSE49570.REST.CD4 209 bp overlap
ChIP GM12878 ENCFF235NGC 115 bp overlap
ChIP GM12878 ENCFF943QPB 137 bp overlap
ChIP GM12878 ENCSR000BGF.REST.GM12878 269 bp overlap
ChIP GM12878 ENCSR000BQS.REST.GM12878 231 bp overlap
ChIP GM23338 ENCFF024TCL 127 bp overlap
ChIP GM23338 ENCSR871KYB.REST.GM23338 394 bp overlap
ChIP GP5D GSE51234.REST.GP5D 395 bp overlap
ChIP GP5D_SIRAD21 GSE51234.REST.GP5D_SIRAD21 409 bp overlap
ChIP H1 ENCFF203SWY 329 bp overlap
ChIP H1 ENCFF429RUE 178 bp overlap
ChIP HCT-116 ENCSR000BVI.REST.HCT-116 322 bp overlap
ChIP HCT116 ENCFF929AYY 145 bp overlap
ChIP HEK293 ENCFF073DOT 260 bp overlap
ChIP HEK293 ENCSR896UBV.REST.HEK293 351 bp overlap
ChIP HL-60 ENCFF589LOF 181 bp overlap
ChIP HL-60 ENCSR000BTF.REST.HL-60 306 bp overlap
ChIP HeLa-S3 ENCFF911DTC 152 bp overlap
ChIP HeLa-S3 ENCSR000BMN.REST.HeLa-S3 277 bp overlap
ChIP Hep-G2 ENCSR000BOT.REST.Hep-G2 301 bp overlap
ChIP Hep-G2 ENCSR000BJL.REST.Hep-G2 155 bp overlap
ChIP HepG2 ENCFF122AWR 138 bp overlap
ChIP HepG2 ENCFF800JSL 158 bp overlap
ChIP Ishikawa ENCFF456OHV 209 bp overlap
ChIP Ishikawa ENCSR000BUU.REST.Ishikawa 387 bp overlap
ChIP K-562 ENCSR137ZMQ.REST.K-562 359 bp overlap
ChIP K-562 ENCSR000BMW.REST.K-562 347 bp overlap
ChIP K-562 GSE70482.REST.K-562 263 bp overlap
ChIP K562 ENCFF430APM 139 bp overlap
ChIP K562 ENCFF685YZN 257 bp overlap
ChIP K562 ENCFF688UKW 273 bp overlap
ChIP K562 ENCFF758CZL 348 bp overlap
ChIP MCF-7 ENCFF893RRD 221 bp overlap
ChIP MCF-7 ENCSR000BSP.REST.MCF-7 425 bp overlap
ChIP NCI-H295R GSE49014.REST.NCI-H295R 137 bp overlap
ChIP NCI-H295R_SF1 GSE49014.REST.NCI-H295R_SF1 120 bp overlap
ChIP PANC-1 ENCSR000BUP.REST.PANC-1 204 bp overlap
ChIP PANC-1 ENCSR000BJO.REST.PANC-1 197 bp overlap
ChIP PANC-1 ENCSR000BPK.REST.PANC-1 188 bp overlap
ChIP PFSK-1 ENCFF668WMP 183 bp overlap
ChIP PFSK-1 ENCFF845VHA 159 bp overlap
ChIP PFSK1 ENCSR000BOX.REST.PFSK1 321 bp overlap
ChIP PFSK1 ENCSR000BJP.REST.PFSK1 203 bp overlap
ChIP Panc1 ENCFF518EEQ 132 bp overlap
ChIP Panc1 ENCFF629OJO 201 bp overlap
ChIP SK-N-SH ENCFF635KBN 148 bp overlap
ChIP SK-N-SH ENCFF861MKH 160 bp overlap
ChIP SK-N-SH ENCSR000BJJ.REST.SK-N-SH 153 bp overlap
ChIP WA01 ENCSR000BHM.REST.WA01 431 bp overlap
ChIP WA01 ENCSR663WAR.REST.WA01 403 bp overlap
ChIP colorectal-cancer_CRC121_dissociated GSE112555.REST.colorectal-cancer_CRC121_dissociated 198 bp overlap
ChIP colorectal-cancer_CRC121_intact GSE112555.REST.colorectal-cancer_CRC121_intact 398 bp overlap
ChIP colorectal-cancer_shCDH1 GSE112555.REST.colorectal-cancer_shCDH1 460 bp overlap
ChIP colorectal-cancer_shCTRL_dissociated GSE112555.REST.colorectal-cancer_shCTRL_dissociated 303 bp overlap
ChIP colorectal-cancer_shCTRL_intact GSE112555.REST.colorectal-cancer_shCTRL_intact 328 bp overlap
ChIP hiPSC_IA12 GSE106870.REST.hiPSC_IA12 209 bp overlap
ChIP hiPSC_IB12 GSE106870.REST.hiPSC_IB12 305 bp overlap
ChIP hiPSC_IIA11 GSE106870.REST.hiPSC_IIA11 180 bp overlap
ChIP hiPSC_IID12 GSE106870.REST.hiPSC_IID12 204 bp overlap
ChIP liver ENCFF240FWT 135 bp overlap
ChIP liver ENCFF577AZT 145 bp overlap
ChIP liver ENCSR867WPH.REST.liver 236 bp overlap
ChIP liver ENCSR893QWP.REST.liver 150 bp overlap
ChIP metastatic-neuroblastoma_CHLA90 GSE100148.REST.metastatic-neuroblastoma_CHLA90 213 bp overlap
SIN3A 3 datasets
ChIP H1 ENCFF042ZSL 314 bp overlap
ChIP WA01 ENCSR000EBO.SIN3A.WA01 181 bp overlap
ChIP WA01 ENCSR000BIS.SIN3A.WA01 107 bp overlap
SIX2 1 dataset
ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 86 bp overlap
SMAD3 2 datasets
ChIP BG03 GSE21614.SMAD3.BG03 173 bp overlap
ChIP BG03_DIFF_2H GSE36578.SMAD3.BG03_DIFF_2H 139 bp overlap
SMARCA4 2 datasets
ChIP hiPSC GSE124903.SMARCA4.hiPSC 518 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 642 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 179 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 190 bp overlap
SMARCC1 3 datasets
ChIP ESC S25-ESC-d0-BAF155-exp1 396 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 468 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 498 bp overlap
SMC3 1 dataset
ChIP HeLa-Kyoto_WAPL_PDS-depleted GSE102884.SMC3.HeLa-Kyoto_WAPL_PDS-depleted 176 bp overlap
SOX15 1 dataset
Motif ES_0h ES_0h-SOX15_MA1152.2 7 bp overlap
SOX2 4 datasets
ChIP H9 GSE46837.SOX2.H9 174 bp overlap
ChIP hESC GSE69479.SOX2.hESC 263 bp overlap
ChIP hESC GSE18292.SOX2.hESC 203 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 460 bp overlap
SP1 2 datasets
ChIP H1 ENCFF263FUH 321 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 355 bp overlap
SRF 2 datasets
ChIP H1 ENCFF036PEF 225 bp overlap
ChIP WA01 ENCSR000BIV.SRF.WA01 130 bp overlap
Sox6 1 dataset
Motif ES_0h ES_0h-Sox6_MA0515.1 10 bp overlap
TAL1 1 dataset
ChIP PRIMA5 GSE33850.TAL1.PRIMA5 185 bp overlap
TBR1 1 dataset
Motif ES_0h ES_0h-TBR1_MA0802.2 9 bp overlap
TBX2 1 dataset
Motif ES_0h ES_0h-TBX2_MA0688.2 9 bp overlap
TBX20 1 dataset
Motif ES_0h ES_0h-TBX20_MA0689.1 11 bp overlap
TBX21 1 dataset
Motif ES_0h ES_0h-TBX21_MA0690.3 10 bp overlap
TBX3 1 dataset
Motif ES_0h ES_0h-TBX3_MA1566.3 9 bp overlap
TBX5 1 dataset
Motif ES_0h ES_0h-TBX5_MA0807.1 8 bp overlap
TCF12 2 datasets
ChIP H1 ENCFF203EBH 251 bp overlap
ChIP WA01 ENCSR000BIT.TCF12.WA01 115 bp overlap
TCF3 1 dataset
ChIP NPC GSE154479.TCF3.NPC 369 bp overlap
TEAD4 5 datasets
ChIP A-549 ENCSR000BUD.TEAD4.A-549 147 bp overlap
ChIP A549 ENCFF243FTL 98 bp overlap
ChIP ESC S26-ESC-d0-TEAD4-exp1 418 bp overlap
ChIP H1 ENCFF778PAX 245 bp overlap
ChIP hESC GSE99202.TEAD4.hESC 237 bp overlap
TFAP2C 2 datasets
ChIP MCF-7_E2 GSE23852.TFAP2C.MCF-7_E2 147 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 136 bp overlap
TGIF2 1 dataset
ChIP WTC11 ENCFF649SHI 262 bp overlap
TP53 2 datasets
ChIP H9_ectoderm GSE142050.TP53.H9_ectoderm 324 bp overlap
ChIP hESC_DIFF GSE39912.TP53.hESC_DIFF 350 bp overlap
TRIM28 2 datasets
ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 57 bp overlap
ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 205 bp overlap
Wt1 1 dataset
Motif ES_0h ES_0h-Wt1_MA1627.2 10 bp overlap
ZNF114 2 datasets
ChIP GM23338 ENCFF631OSW 357 bp overlap
ChIP GM23338 ENCSR555KFE.ZNF114.GM23338 445 bp overlap
ZNF462 2 datasets
ChIP GM23338 ENCFF896CCA 251 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 625 bp overlap
ZNF532 1 dataset
ChIP WTC11 ENCFF373VBX 250 bp overlap
ZNF558 1 dataset
Motif ES_0h ES_0h-ZNF558_MA2335.1 29 bp overlap
ZNF652 3 datasets
Motif DE_12h DE_12h-ZNF652_MA1657.2 9 bp overlap
Motif ES_0h ES_0h-ZNF652_MA1657.2 9 bp overlap
Motif ES_0h ES_0h-ZNF652_MA1657.2 9 bp overlap
ZNF677 1 dataset
Motif ES_0h ES_0h-ZNF677_MA2101.1 12 bp overlap