chr9 : 101,443,339 101,443,704
365 bp 105 TFs 1 linked gene
This 365 bp open chromatin element is linked to ALDOB and is bound by 105 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
ALDOB 6.0 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr9:101,438,339 – 101,448,704
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
105 transcription factors
Source
Cell type
AGO1 2 datasets
ChIP Hep-G2 ENCSR555ZMV.AGO1.Hep-G2 220 bp overlap
ChIP Hep-G2 GSE120104.AGO1.Hep-G2 209 bp overlap
AR 1 dataset
ChIP LNCaP GSE80256.AR.LNCaP 191 bp overlap
ARID2 1 dataset
ChIP NGP GSE134626.ARID2.NGP 246 bp overlap
ASCL1 4 datasets
ChIP NCI-H128 GSE69394.ASCL1.NCI-H128 334 bp overlap
ChIP NCI-H2107 GSE69394.ASCL1.NCI-H2107 316 bp overlap
ChIP NCI-H889 GSE69394.ASCL1.NCI-H889 316 bp overlap
ChIP SCLC_ASCLP GSE61197.ASCL1.SCLC_ASCLP 365 bp overlap
ATF3 2 datasets
ChIP liver ENCFF375GID 365 bp overlap
ChIP liver ENCSR480LIS.ATF3.liver 317 bp overlap
ATF6 1 dataset
Motif DE_36h DE_36h-ATF6_MA1466.2 13 bp overlap
BHLHE22 2 datasets
Motif DE_36h DE_36h-BHLHE22_MA1635.2 6 bp overlap
Motif DE_36h DE_36h-BHLHE22_MA1635.2 6 bp overlap
BRD4 5 datasets
ChIP HEK293_sgNT GSE129407.BRD4.HEK293_sgNT 341 bp overlap
ChIP NCI-H2171 GSE101821.BRD4.NCI-H2171 348 bp overlap
ChIP NCI-H2171_DMSO GSE49224.BRD4.NCI-H2171_DMSO 191 bp overlap
ChIP cortical-interneuron GSE117508.BRD4.cortical-interneuron 305 bp overlap
ChIP cortical-interneuron_KCl-pos GSE117508.BRD4.cortical-interneuron_KCl-pos 274 bp overlap
CBX2 1 dataset
ChIP HEK293T GSE34774.CBX2.HEK293T 351 bp overlap
CDX2 1 dataset
ChIP adult-duodenal-cell GSE115314.CDX2.adult-duodenal-cell 248 bp overlap
CEBPA 1 dataset
ChIP liver ERP002306.CEBPA.liver 198 bp overlap
CREB3L4 1 dataset
Motif DE_36h DE_36h-CREB3L4_MA1474.2 10 bp overlap
CTCF 11 datasets
ChIP GSC23 GSE139416.CTCF.GSC23 240 bp overlap
ChIP HT-1080_CBL0137-6h GSE122462.CTCF.HT-1080_CBL0137-6h 187 bp overlap
ChIP Peyers-patch ENCSR375VXU.CTCF.Peyers-patch 288 bp overlap
ChIP anterior-temporal-cortex_fetal GSE116825.CTCF.anterior-temporal-cortex_fetal 240 bp overlap
ChIP body of pancreas ENCFF269EDN 293 bp overlap
ChIP body of pancreas ENCFF438KTE 221 bp overlap
ChIP body of pancreas ENCFF798MEO 233 bp overlap
ChIP body of pancreas ENCFF881RGF 242 bp overlap
ChIP heart_left-ventricle ENCSR791AYW.CTCF.heart_left-ventricle 318 bp overlap
ChIP pancreas_body ENCSR408XTO.CTCF.pancreas_body 177 bp overlap
ChIP primary-glioblastoma_G523 GSE121601.CTCF.primary-glioblastoma_G523 182 bp overlap
E2F1 1 dataset
ChIP LNCaP_shRB GSE94958.E2F1.LNCaP_shRB 188 bp overlap
EGR1 4 datasets
ChIP liver ENCFF130MBW 356 bp overlap
ChIP liver ENCFF911LGW 365 bp overlap
ChIP liver ENCSR736BUG.EGR1.liver 289 bp overlap
ChIP liver ENCSR290ZOS.EGR1.liver 223 bp overlap
EP300 1 dataset
ChIP sigmoid colon ENCFF524QSR 271 bp overlap
ERG 1 dataset
ChIP aortic-endothelial-cell_D51 GSE139377.ERG.aortic-endothelial-cell_D51 166 bp overlap
ESR1 2 datasets
ChIP Ishikawa_ETV4-KO2_Mili GSE129803.ESR1.Ishikawa_ETV4-KO2_Mili 227 bp overlap
ChIP Ishikawa_siNTC-96h GSE129803.ESR1.Ishikawa_siNTC-96h 247 bp overlap
FOXA1 6 datasets
ChIP breast-cancer_heregulin GSE101407.FOXA1.breast-cancer_heregulin 334 bp overlap
ChIP liver ENCFF537QZV 171 bp overlap
ChIP liver ENCFF749ERP 345 bp overlap
ChIP liver ENCSR324RCI.FOXA1.liver 365 bp overlap
ChIP liver ERP002306.FOXA1.liver 315 bp overlap
ChIP liver ENCSR735KEY.FOXA1.liver 242 bp overlap
FOXA2 4 datasets
ChIP liver ENCFF877SFI 90 bp overlap
ChIP liver ENCFF888VJF 271 bp overlap
ChIP liver ENCSR080XEY.FOXA2.liver 365 bp overlap
ChIP liver ENCSR310NYI.FOXA2.liver 348 bp overlap
GATA2 3 datasets
ChIP K-562 ENCSR000EWG.GATA2.K-562 137 bp overlap
ChIP ME-1_CBFB-MYH11-KD GSE117138.GATA2.ME-1_CBFB-MYH11-KD 255 bp overlap
ChIP hiPSC_SLC6ebs GSE107639.GATA2.hiPSC_SLC6ebs 147 bp overlap
GATA6 6 datasets
ChIP DE_D1 S09-DE-d1-GATA6-exp1 354 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 365 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 365 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 365 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 365 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 365 bp overlap
HDAC2 1 dataset
ChIP RH4_DMSO-6H GSE116344.HDAC2.RH4_DMSO-6H 365 bp overlap
HNF4A 3 datasets
ChIP liver ENCFF354NRH 365 bp overlap
ChIP liver ENCFF449HPV 365 bp overlap
ChIP liver ERP002306.HNF4A.liver 341 bp overlap
HNF4G 2 datasets
ChIP liver ENCFF170YNZ 314 bp overlap
ChIP liver ENCSR297GII.HNF4G.liver 264 bp overlap
JUN 3 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 248 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 240 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 268 bp overlap
JUND 3 datasets
ChIP liver ENCFF007WWT 365 bp overlap
ChIP liver ENCSR837GTK.JUND.liver 365 bp overlap
ChIP liver ENCSR196HGZ.JUND.liver 276 bp overlap
KDM4C 1 dataset
ChIP KYSE-150 GSE53938.KDM4C.KYSE-150 346 bp overlap
KLF9 1 dataset
Motif DE_36h DE_36h-KLF9_MA1107.3 11 bp overlap
MAFB 1 dataset
ChIP islet ERP004003.MAFB.islet 136 bp overlap
MAX 8 datasets
ChIP NCI-H128 GSE41105.MAX.NCI-H128 292 bp overlap
ChIP NCI-H2171 GSE41105.MAX.NCI-H2171 365 bp overlap
ChIP NCI-H2171 GSE36354.MAX.NCI-H2171 365 bp overlap
ChIP liver ENCFF092GVW 221 bp overlap
ChIP liver ENCFF092GVW 128 bp overlap
ChIP liver ENCFF584QGB 365 bp overlap
ChIP liver ENCSR847DIT.MAX.liver 365 bp overlap
ChIP liver ENCSR521IID.MAX.liver 284 bp overlap
MAZ 1 dataset
Motif DE_36h DE_36h-MAZ_MA1522.2 8 bp overlap
MED1 1 dataset
ChIP NCI-H2171 GSE36354.MED1.NCI-H2171 364 bp overlap
MEIS1 1 dataset
Motif DE_36h DE_36h-MEIS1_MA0498.3 5 bp overlap
MTA2 1 dataset
ChIP RH4 GSE155861.MTA2.RH4 74 bp overlap
MYC 2 datasets
ChIP NCI-H128 GSE41105.MYC.NCI-H128 344 bp overlap
ChIP NCI-H2171 GSE36354.MYC.NCI-H2171 365 bp overlap
MYCN 1 dataset
ChIP CHP-134 GSE129588.MYCN.CHP-134 365 bp overlap
MYOD1 2 datasets
ChIP RD_shSNAI2 GSE137168.MYOD1.RD_shSNAI2 288 bp overlap
ChIP rhabdomyosarcoma GSE50413.MYOD1.rhabdomyosarcoma 169 bp overlap
NCOA5 1 dataset
ChIP HepG2 ENCFF840ZTN 142 bp overlap
NEUROD1 4 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 229 bp overlap
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 365 bp overlap
ChIP D341-Med_shNEUROD1-1154 GSE92582.NEUROD1.D341-Med_shNEUROD1-1154 276 bp overlap
ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 300 bp overlap
NEUROG2 6 datasets
ChIP MRC-5_NFD_02DPT GSE75910.NEUROG2.MRC-5_NFD_02DPT 365 bp overlap
ChIP MRC-5_NFD_05DPT GSE75910.NEUROG2.MRC-5_NFD_05DPT 365 bp overlap
ChIP MRC-5_NFD_1DPT GSE75910.NEUROG2.MRC-5_NFD_1DPT 365 bp overlap
ChIP MRC-5_N_02DPT GSE75910.NEUROG2.MRC-5_N_02DPT 349 bp overlap
ChIP MRC-5_N_05DPT GSE75910.NEUROG2.MRC-5_N_05DPT 302 bp overlap
ChIP MRC-5_N_1DPT GSE75910.NEUROG2.MRC-5_N_1DPT 334 bp overlap
NHLH1 1 dataset
Motif DE_36h DE_36h-NHLH1_MA0048.3 9 bp overlap
NHLH2 1 dataset
Motif DE_36h DE_36h-NHLH2_MA1529.2 16 bp overlap
NKX3-1 1 dataset
ChIP islet ERP004003.NKX3-1.islet 337 bp overlap
NR2C1 1 dataset
Motif DE_36h DE_36h-NR2C1_MA1535.2 6 bp overlap
NR2C2 1 dataset
Motif DE_36h DE_36h-NR2C2_MA1536.2 6 bp overlap
NR2F1 1 dataset
Motif DE_36h DE_36h-NR2F1_MA0017.3 12 bp overlap
NR2F2 4 datasets
ChIP liver ENCFF427MRU 365 bp overlap
ChIP liver ENCFF565JGD 365 bp overlap
ChIP liver ENCSR338MMB.NR2F2.liver 269 bp overlap
ChIP liver ENCSR168SMX.NR2F2.liver 305 bp overlap
Neurod2 2 datasets
Motif DE_36h DE_36h-Neurod2_MA1993.2 6 bp overlap
Motif DE_36h DE_36h-Neurod2_MA1993.2 6 bp overlap
Nr1H2 1 dataset
Motif DE_36h DE_36h-Nr1H2_MA1996.2 6 bp overlap
Nr1H4 1 dataset
Motif DE_36h DE_36h-Nr1H4_MA1110.3 6 bp overlap
Nr1h3 1 dataset
Motif DE_36h DE_36h-Nr1h3_MA2337.1 6 bp overlap
Olig2 2 datasets
Motif DE_36h DE_36h-Olig2_MA1997.2 6 bp overlap
Motif DE_36h DE_36h-Olig2_MA1997.2 6 bp overlap
PARP1 1 dataset
ChIP MCF-10A GSE93038.PARP1.MCF-10A 242 bp overlap
PAX3-FOXO1 2 datasets
ChIP RH3 GSE83726.PAX3-FOXO1.RH3 202 bp overlap
ChIP RH4 GSE140115.PAX3-FOXO1.RH4 262 bp overlap
PBX3 1 dataset
Motif DE_36h DE_36h-PBX3_MA1114.2 11 bp overlap
PKNOX1 1 dataset
Motif DE_36h DE_36h-PKNOX1_MA0782.3 10 bp overlap
POLR2A 8 datasets
ChIP Peyer's patch ENCFF767HVN 300 bp overlap
ChIP body of pancreas ENCFF501FEC 349 bp overlap
ChIP body of pancreas ENCFF675RCN 78 bp overlap
ChIP body of pancreas ENCFF727UBE 310 bp overlap
ChIP right lobe of liver ENCFF026NCK 365 bp overlap
ChIP sigmoid colon ENCFF748YVT 147 bp overlap
ChIP transverse colon ENCFF607LKE 281 bp overlap
ChIP transverse colon ENCFF840PXT 321 bp overlap
POU4F2 1 dataset
ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 133 bp overlap
Ptf1A 2 datasets
Motif DE_36h DE_36h-Ptf1A_MA1619.2 8 bp overlap
Motif DE_36h DE_36h-Ptf1A_MA1619.2 8 bp overlap
RAD21 3 datasets
ChIP IMR-5 GSE78957.RAD21.IMR-5 111 bp overlap
ChIP liver ENCFF485PAC 365 bp overlap
ChIP liver ENCFF522JHE 350 bp overlap
RARA 1 dataset
Motif DE_36h DE_36h-RARA_MA0730.1 17 bp overlap
RBPJ 2 datasets
ChIP GSC8-11_12d-das GSE74557.RBPJ.GSC8-11_12d-das 225 bp overlap
ChIP GSC8-11_dasatinib GSE74557.RBPJ.GSC8-11_dasatinib 283 bp overlap
REST 3 datasets
ChIP liver ENCFF240FWT 365 bp overlap
ChIP liver ENCSR867WPH.REST.liver 359 bp overlap
ChIP liver ENCSR893QWP.REST.liver 342 bp overlap
RORA 2 datasets
Motif DE_36h DE_36h-RORA_MA0071.1 10 bp overlap
Motif DE_36h DE_36h-RORA_MA0072.2 11 bp overlap
RORB 1 dataset
Motif DE_36h DE_36h-RORB_MA1150.2 10 bp overlap
RORC 1 dataset
Motif DE_36h DE_36h-RORC_MA1151.2 10 bp overlap
RXRA 2 datasets
ChIP liver ENCFF077DAP 365 bp overlap
ChIP liver ENCFF807CIA 365 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 272 bp overlap
SMAD2_3 2 datasets
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 272 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 275 bp overlap
SMARCA4 2 datasets
ChIP NGP GSE134626.SMARCA4.NGP 283 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 232 bp overlap
SOX4 1 dataset
ChIP MRC-5_1DPT GSE75910.SOX4.MRC-5_1DPT 278 bp overlap
SP1 2 datasets
ChIP liver ENCFF597LFJ 365 bp overlap
ChIP liver ENCFF769YSM 365 bp overlap
STAT3 1 dataset
Motif DE_36h DE_36h-STAT3_MA0144.3 9 bp overlap
T 1 dataset
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 328 bp overlap
TAF1 4 datasets
ChIP Hep-G2 ENCSR918OKK.TAF1.Hep-G2 157 bp overlap
ChIP liver ENCFF610UQP 298 bp overlap
ChIP liver ENCFF972HXJ 313 bp overlap
ChIP liver ENCSR016BMM.TAF1.liver 322 bp overlap
TBX5 1 dataset
Motif DE_36h DE_36h-TBX5_MA0807.1 8 bp overlap
TFAP4 2 datasets
Motif DE_36h DE_36h-TFAP4_MA0691.1 10 bp overlap
Motif DE_36h DE_36h-TFAP4_MA0691.1 10 bp overlap
TGIF2LX 1 dataset
Motif DE_36h DE_36h-TGIF2LX_MA1571.1 12 bp overlap
TGIF2LY 1 dataset
Motif DE_36h DE_36h-TGIF2LY_MA1572.1 12 bp overlap
TRIM25 1 dataset
ChIP MDA-MB-231 GSE79588.TRIM25.MDA-MB-231 208 bp overlap
TRIM28 1 dataset
ChIP hESC GSE115387.TRIM28.hESC 222 bp overlap
Tcf12 2 datasets
Motif DE_36h DE_36h-Tcf12_MA0521.3 6 bp overlap
Motif DE_36h DE_36h-Tcf12_MA0521.3 6 bp overlap
Twist2 2 datasets
Motif DE_36h DE_36h-Twist2_MA0633.3 6 bp overlap
Motif DE_36h DE_36h-Twist2_MA0633.3 6 bp overlap
U2AF1 1 dataset
ChIP Hep-G2 GSE120104.U2AF1.Hep-G2 237 bp overlap
VDR 1 dataset
ChIP kidney-cortex GSE129585.VDR.kidney-cortex 324 bp overlap
YY1 4 datasets
ChIP liver ENCFF400MBC 341 bp overlap
ChIP liver ENCFF515BWJ 187 bp overlap
ChIP liver ENCFF515BWJ 365 bp overlap
ChIP liver ENCSR994YLZ.YY1.liver 365 bp overlap
YY2 1 dataset
Motif DE_36h DE_36h-YY2_MA0748.3 7 bp overlap
ZBTB33 3 datasets
ChIP liver ENCFF592BJA 365 bp overlap
ChIP liver ENCSR345YWJ.ZBTB33.liver 159 bp overlap
ChIP liver ENCSR516HUP.ZBTB33.liver 298 bp overlap
ZEB1 1 dataset
ChIP neuron_bipolar_doxy_4d ENCSR418KUS.ZEB1.neuron_bipolar_doxy_4d 149 bp overlap
ZNF148 1 dataset
Motif DE_36h DE_36h-ZNF148_MA1653.2 10 bp overlap
ZNF281 1 dataset
Motif DE_36h DE_36h-ZNF281_MA1630.3 10 bp overlap
ZNF317 2 datasets
Motif DE_36h DE_36h-ZNF317_MA1593.2 8 bp overlap
Motif DE_36h DE_36h-ZNF317_MA1593.2 8 bp overlap
ZNF687 1 dataset
ChIP HepG2 ENCFF653WIX 250 bp overlap
ZNF768 1 dataset
ChIP HepG2 ENCFF388QCK 359 bp overlap
ZSCAN30 1 dataset
ChIP HepG2 ENCFF093LBM 289 bp overlap
Zfp335 1 dataset
Motif DE_36h DE_36h-Zfp335_MA2002.2 7 bp overlap