chr7 : 150,329,815 – 150,330,005
190 bp 96 TFs 4 linked genes
This 190 bp open chromatin element is linked to 4 target genes and is bound by 96 transcription factors.
Linked Genes
4 genes
Distance
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ZBED10P at TSS At TSS Proximity
LRRC61 6.5 kb Proximal Proximity
ENSG00000293476 6.6 kb Proximal Proximity
ACTR3C 6.7 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr7:150,324,815 – 150,335,005
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
96 transcription factors
Source
Cell type
AGO2 1 dataset
ChIP HepG2 ENCFF773YDL 158 bp overlap
ASCL1 5 datasets
Motif DE_12h DE_12h-ASCL1_MA1100.3 8 bp overlap
Motif DE_12h DE_12h-ASCL1_MA1631.2 9 bp overlap
ChIP G523NS_Dox GSE87618.ASCL1.G523NS_Dox 184 bp overlap
ChIP NCI-H2107 GSE69394.ASCL1.NCI-H2107 109 bp overlap
ChIP SCLC_ASCLP GSE61197.ASCL1.SCLC_ASCLP 163 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 190 bp overlap
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 158 bp overlap
Ascl2 1 dataset
Motif DE_12h DE_12h-Ascl2_MA0816.1 10 bp overlap
BCOR 3 datasets
ChIP WA01 GSE104690.BCOR.WA01 190 bp overlap
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 165 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 190 bp overlap
BHLHE22 1 dataset
Motif DE_12h DE_12h-BHLHE22_MA1635.2 6 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 190 bp overlap
BRD4 5 datasets
ChIP CLL_patient4_4h_CpG GSE109411.BRD4.CLL_patient4_4h_CpG 103 bp overlap
ChIP SUM159PT_100nMtrametinib_24h GSE87418.BRD4.SUM159PT_100nMtrametinib_24h 190 bp overlap
ChIP SUM159PT_scramble GSE131097.BRD4.SUM159PT_scramble 167 bp overlap
ChIP hESC GSE33281.BRD4.hESC 61 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 150 bp overlap
CHD2 2 datasets
ChIP H1 ENCFF991MKH 190 bp overlap
ChIP WA01 ENCSR000EBT.CHD2.WA01 172 bp overlap
CHD7 1 dataset
ChIP WA01 ENCSR000AVA.CHD7.WA01 187 bp overlap
CREB1 1 dataset
ChIP WA01 ENCSR000BSN.CREB1.WA01 172 bp overlap
CREM 1 dataset
ChIP WTC11 ENCFF209ZUE 190 bp overlap
CTBP2 2 datasets
ChIP H1 ENCFF329MAX 190 bp overlap
ChIP WA01 ENCSR000EUO.CTBP2.WA01 190 bp overlap
CTCF 11 datasets
Motif DE_12h DE_12h-CTCF_MA1930.2 33 bp overlap
ChIP GM23338 ENCFF772DML 182 bp overlap
ChIP H1 ENCFF414GZI 153 bp overlap
ChIP H1 ENCFF764RHO 190 bp overlap
ChIP H9 ENCFF152GTF 190 bp overlap
ChIP RH4 GSE83726.CTCF.RH4 171 bp overlap
ChIP WA01 ENCSR000BNH.CTCF.WA01 116 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 113 bp overlap
ChIP myoblast_skeletal_muscle ENCSR000ANE.CTCF.myoblast_skeletal_muscle 151 bp overlap
ChIP myotube ENCSR000ANS.CTCF.myotube 132 bp overlap
ChIP skeletal muscle myoblast ENCFF813BQI 190 bp overlap
E2F6 2 datasets
ChIP H1 ENCFF785DWK 190 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 188 bp overlap
EGR1 1 dataset
ChIP A-375 GSE116190.EGR1.A-375 129 bp overlap
EP300 1 dataset
ChIP WA01 ENCSR000BKK.EP300.WA01 157 bp overlap
ERG 2 datasets
ChIP MCF-7 GSE23730.ERG.MCF-7 123 bp overlap
ChIP SKNO-1 GSE23730.ERG.SKNO-1 190 bp overlap
ESR1 2 datasets
ChIP MCF-7 GSE48930.ESR1.MCF-7 133 bp overlap
ChIP MCF-7_estradiol-aldosterone_45min GSE99626.ESR1.MCF-7_estradiol-aldosterone_45min 115 bp overlap
ETV6 1 dataset
ChIP WTC11 ENCFF812SCD 190 bp overlap
EZH2 1 dataset
ChIP hESC GSE113817.EZH2.hESC 153 bp overlap
FOXP1 1 dataset
ChIP H9 GSE31006.FOXP1.H9 143 bp overlap
GABPA 1 dataset
ChIP WA01 ENCSR000BIW.GABPA.WA01 190 bp overlap
GTF3C2 1 dataset
ChIP H9 GSE94418.GTF3C2.H9 190 bp overlap
HAND2 1 dataset
Motif DE_12h DE_12h-HAND2_MA1638.2 6 bp overlap
HDAC2 5 datasets
ChIP H1 ENCFF939VKA 142 bp overlap
ChIP RH4_DMSO-6H GSE116344.HDAC2.RH4_DMSO-6H 173 bp overlap
ChIP RH4_Entinostat-6H GSE116344.HDAC2.RH4_Entinostat-6H 147 bp overlap
ChIP WA01 ENCSR000AVB.HDAC2.WA01 190 bp overlap
ChIP WA01 ENCSR000BNR.HDAC2.WA01 142 bp overlap
HIVEP1 1 dataset
ChIP Hep-G2 ENCSR697WMX.HIVEP1.Hep-G2 91 bp overlap
HNRNPL 1 dataset
ChIP Hep-G2 GSE120104.HNRNPL.Hep-G2 89 bp overlap
HNRNPLL 2 datasets
ChIP Hep-G2 GSE120104.HNRNPLL.Hep-G2 180 bp overlap
ChIP Hep-G2 ENCSR804HMZ.HNRNPLL.Hep-G2 190 bp overlap
IFNA1 1 dataset
ChIP Huh-7_GFP GSE110511.IFNA1.Huh-7_GFP 167 bp overlap
JARID2 1 dataset
ChIP MRC-5_IPS25_MEG3 GSE48515.JARID2.MRC-5_IPS25_MEG3 190 bp overlap
JUN 4 datasets
ChIP DE_D2 S02-DE-d2-JUN-exp1 146 bp overlap
ChIP ESC S24-ESC-d0-JUN-exp1 190 bp overlap
ChIP ESC S34-ESC-d0-JUN-exp2 190 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 190 bp overlap
JUND 1 dataset
ChIP WA01 ENCSR000BKP.JUND.WA01 178 bp overlap
KDM1A 1 dataset
ChIP H1 ENCFF696SGD 190 bp overlap
MAX 2 datasets
ChIP H1 ENCFF914VQY 108 bp overlap
ChIP WA01 ENCSR000EUP.MAX.WA01 132 bp overlap
MTA2 1 dataset
ChIP RH4 GSE155861.MTA2.RH4 190 bp overlap
MYBL2 2 datasets
ChIP A-673 GSE119971.MYBL2.A-673 190 bp overlap
ChIP WTC11 ENCFF166TKT 138 bp overlap
MYOD1 4 datasets
ChIP IMR-90_GM GSE128527.MYOD1.IMR-90_GM 190 bp overlap
ChIP RH4 GSE83726.MYOD1.RH4 190 bp overlap
ChIP myoblast GSE50413.MYOD1.myoblast 190 bp overlap
ChIP rhabdomyosarcoma GSE50413.MYOD1.rhabdomyosarcoma 190 bp overlap
MYOG 1 dataset
Motif DE_12h DE_12h-MYOG_MA0500.3 8 bp overlap
NANOG 5 datasets
ChIP H1 ENCFF747ZPQ 176 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 190 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 190 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 190 bp overlap
ChIP hESC GSE20650.NANOG.hESC 84 bp overlap
NEUROG2 6 datasets
ChIP MRC-5_NFD_02DPT GSE75910.NEUROG2.MRC-5_NFD_02DPT 190 bp overlap
ChIP MRC-5_NFD_05DPT GSE75910.NEUROG2.MRC-5_NFD_05DPT 190 bp overlap
ChIP MRC-5_NFD_1DPT GSE75910.NEUROG2.MRC-5_NFD_1DPT 184 bp overlap
ChIP MRC-5_N_02DPT GSE75910.NEUROG2.MRC-5_N_02DPT 185 bp overlap
ChIP MRC-5_N_05DPT GSE75910.NEUROG2.MRC-5_N_05DPT 168 bp overlap
ChIP MRC-5_N_1DPT GSE75910.NEUROG2.MRC-5_N_1DPT 189 bp overlap
NHLH1 1 dataset
Motif DE_12h DE_12h-NHLH1_MA0048.3 9 bp overlap
NR3C1 1 dataset
ChIP A-549 ENCSR000BJR.NR3C1.A-549 104 bp overlap
Neurod2 1 dataset
Motif DE_12h DE_12h-Neurod2_MA1993.2 6 bp overlap
OGG1 3 datasets
ChIP HEK293 GSE89017.OGG1.HEK293 190 bp overlap
ChIP HEK293_15min GSE89017.OGG1.HEK293_15min 190 bp overlap
ChIP HEK293_60_min GSE89017.OGG1.HEK293_60_min 189 bp overlap
OLIG2 3 datasets
ChIP brain-prefrontal-cortex_2017014 GSE129039.OLIG2.brain-prefrontal-cortex_2017014 95 bp overlap
ChIP brain-prefrontal-cortex_2017039 GSE129039.OLIG2.brain-prefrontal-cortex_2017039 134 bp overlap
ChIP brain-prefrontal-cortex_2018006 GSE129039.OLIG2.brain-prefrontal-cortex_2018006 124 bp overlap
ONECUT1 1 dataset
ChIP liver ERP002306.ONECUT1.liver 52 bp overlap
Olig2 1 dataset
Motif DE_12h DE_12h-Olig2_MA1997.2 6 bp overlap
PCGF1 1 dataset
ChIP WA01 GSE104690.PCGF1.WA01 190 bp overlap
POLR2A 5 datasets
ChIP H1 ENCFF566JSR 190 bp overlap
ChIP HepG2 ENCFF718XAJ 167 bp overlap
ChIP K562 ENCFF262YXJ 190 bp overlap
ChIP K562 ENCFF262YXJ 190 bp overlap
ChIP adrenal gland ENCFF843OBJ 173 bp overlap
POLR2G 4 datasets
ChIP HepG2 ENCFF508UTS 190 bp overlap
ChIP HepG2 ENCFF508UTS 190 bp overlap
ChIP K562 ENCFF047BLG 190 bp overlap
ChIP K562 ENCFF648YPL 190 bp overlap
POU5F1 7 datasets
ChIP BG03 GSE21614.POU5F1.BG03 190 bp overlap
ChIP H1 ENCFF698ZAP 121 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 190 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 190 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 155 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 174 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 161 bp overlap
Ptf1A 1 dataset
Motif DE_12h DE_12h-Ptf1A_MA1618.2 9 bp overlap
RAD21 3 datasets
ChIP H1 ENCFF698EWO 190 bp overlap
ChIP H1 ENCFF967OJF 150 bp overlap
ChIP RH4 GSE83726.RAD21.RH4 138 bp overlap
RARA 1 dataset
ChIP TSU-1621MT GSE60477.RARA.TSU-1621MT 151 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 190 bp overlap
RBFOX2 6 datasets
ChIP HepG2 ENCFF554DMZ 190 bp overlap
ChIP HepG2 ENCFF939HTZ 190 bp overlap
ChIP K-562 ENCSR822LBD.RBFOX2.K-562 190 bp overlap
ChIP K-562 GSE120104.RBFOX2.K-562 190 bp overlap
ChIP K562 ENCFF196WTG 190 bp overlap
ChIP K562 ENCFF967GRF 190 bp overlap
RBM22 2 datasets
ChIP K-562 GSE120104.RBM22.K-562 166 bp overlap
ChIP K-562 ENCSR848AOP.RBM22.K-562 134 bp overlap
REST 1 dataset
ChIP PANC-1 ENCSR000BJO.REST.PANC-1 117 bp overlap
RXR 1 dataset
ChIP TSU-1621MT GSE60477.RXR.TSU-1621MT 129 bp overlap
RYBP 1 dataset
ChIP WA01 GSE104690.RYBP.WA01 190 bp overlap
SIN3A 5 datasets
ChIP H1 ENCFF042ZSL 190 bp overlap
ChIP WA01 ENCSR000EBO.SIN3A.WA01 170 bp overlap
ChIP WA01 ENCSR000BIS.SIN3A.WA01 146 bp overlap
ChIP hiPSC_IB12 GSE106870.SIN3A.hiPSC_IB12 137 bp overlap
ChIP hiPSC_IID12 GSE106870.SIN3A.hiPSC_IID12 106 bp overlap
SMAD1 1 dataset
ChIP BG03 GSE36578.SMAD1.BG03 96 bp overlap
SMAD2 1 dataset
ChIP hESC GSE29422.SMAD2.hESC 154 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8 GSE109524.SMAD2-3.HUES-8 190 bp overlap
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 144 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 183 bp overlap
SMAD2_3 2 datasets
ChIP ESC S23-ESC-d0-SMAD2_3-exp1 190 bp overlap
ChIP ESC S33-ESC-d0-SMAD2_3-exp2 190 bp overlap
SMAD3 5 datasets
ChIP BG03 GSE21614.SMAD3.BG03 125 bp overlap
ChIP BG03_DIFF_0H GSE36578.SMAD3.BG03_DIFF_0H 181 bp overlap
ChIP BG03_DIFF_2H GSE36578.SMAD3.BG03_DIFF_2H 179 bp overlap
ChIP WTC11 ENCFF815YYQ 190 bp overlap
ChIP hESC GSE29422.SMAD3.hESC 149 bp overlap
SMARCA4 2 datasets
ChIP hiPSC GSE124903.SMARCA4.hiPSC 190 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 190 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 190 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 190 bp overlap
SMARCC1 3 datasets
ChIP ESC S25-ESC-d0-BAF155-exp1 190 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 190 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 190 bp overlap
SOX2 2 datasets
ChIP RENVM GSE49404.SOX2.RENVM 55 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 108 bp overlap
SP1 1 dataset
ChIP WA01 ENCSR000BIR.SP1.WA01 190 bp overlap
SREBP2 1 dataset
ChIP HCC70 GSE126380.SREBP2.HCC70 176 bp overlap
STAT3 1 dataset
ChIP WA01 ERP004237.STAT3.WA01 166 bp overlap
TAF1 2 datasets
ChIP H1 ENCFF478SZO 190 bp overlap
ChIP WA01 ENCSR000BHO.TAF1.WA01 190 bp overlap
TBP 4 datasets
ChIP H1 ENCFF859IIO 190 bp overlap
ChIP WA01 ENCSR000ECB.TBP.WA01 190 bp overlap
ChIP hESC GSE122298.TBP.hESC 190 bp overlap
ChIP hiPSC_WTa_RNase-neg GSE128135.TBP.hiPSC_WTa_RNase-neg 190 bp overlap
TCF12 1 dataset
ChIP WA01 ENCSR000BIT.TCF12.WA01 190 bp overlap
TCF3 1 dataset
ChIP NPC GSE154479.TCF3.NPC 190 bp overlap
TCF4 1 dataset
ChIP GEN2-2 GSE76147.TCF4.GEN2-2 113 bp overlap
TEAD1 1 dataset
ChIP WTC11 ENCFF502QUV 190 bp overlap
TEAD4 1 dataset
ChIP ESC S26-ESC-d0-TEAD4-exp1 190 bp overlap
TFAP4 1 dataset
ChIP K562 ENCFF727PXG 129 bp overlap
TRIM28 1 dataset
ChIP hESC GSE115387.TRIM28.hESC 181 bp overlap
Tcf12 1 dataset
Motif DE_12h DE_12h-Tcf12_MA0521.3 6 bp overlap
Twist2 1 dataset
Motif DE_12h DE_12h-Twist2_MA0633.3 6 bp overlap
YY1 2 datasets
ChIP H1 ENCFF524BTL 186 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 168 bp overlap
ZFX 2 datasets
ChIP HEK293T_FLAG GSE145160.ZFX.HEK293T_FLAG 190 bp overlap
ChIP K562 ENCFF536AJO 143 bp overlap
ZKSCAN3 1 dataset
Motif DE_12h DE_12h-ZKSCAN3_MA1973.2 14 bp overlap
ZNF143 1 dataset
ChIP WA01 ENCSR000EBW.ZNF143.WA01 173 bp overlap
ZNF16 1 dataset
Motif DE_12h DE_12h-ZNF16_MA1654.2 21 bp overlap
ZNF207 1 dataset
ChIP WA09 GSE118632.ZNF207.WA09 190 bp overlap
ZNF423 1 dataset
ChIP WTC11 ENCFF574PBR 87 bp overlap
ZNF462 2 datasets
ChIP GM23338 ENCFF896CCA 130 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 139 bp overlap
ZNF610 1 dataset
Motif DE_12h DE_12h-ZNF610_MA1713.2 10 bp overlap
ZNF93 1 dataset
Motif DE_12h DE_12h-ZNF93_MA1721.2 14 bp overlap
Huangfu Lab · Publications · Resources · Contact