chr6 : 167,236,265 167,236,542
277 bp 100 TFs 1 linked gene
This 277 bp open chromatin element is linked to HPAT5 and is bound by 100 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
HPAT5 8.0 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:167,231,265 – 167,241,542
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
100 transcription factors
Source
Cell type
AGO1 4 datasets
ChIP Hep-G2 ENCSR555ZMV.AGO1.Hep-G2 272 bp overlap
ChIP Hep-G2 GSE120104.AGO1.Hep-G2 221 bp overlap
ChIP HepG2 ENCFF358CXO 126 bp overlap
ChIP K562 ENCFF741BCI 139 bp overlap
AR 1 dataset
ChIP MDA-MB-453 ERP003503.AR.MDA-MB-453 125 bp overlap
ARNTL 1 dataset
ChIP NSC_hNP1 GSE134972.ARNTL.NSC_hNP1 250 bp overlap
ATF3 1 dataset
ChIP Hep-G2 ENCSR402ZCY.ATF3.Hep-G2 221 bp overlap
BCL11A 1 dataset
ChIP HUDEP-2_90min GSE104676.BCL11A.HUDEP-2_90min 68 bp overlap
BRD4 8 datasets
ChIP CLL_patient2_4h_CpG_BET GSE109411.BRD4.CLL_patient2_4h_CpG_BET 165 bp overlap
ChIP CLL_patient3_4h_CpG_BET GSE109411.BRD4.CLL_patient3_4h_CpG_BET 233 bp overlap
ChIP CLL_patient4_4h_CpG_BET GSE109411.BRD4.CLL_patient4_4h_CpG_BET 235 bp overlap
ChIP Kelly_resistant GSE103030.BRD4.Kelly_resistant 277 bp overlap
ChIP Kelly_resistant_JQ1 GSE103030.BRD4.Kelly_resistant_JQ1 109 bp overlap
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 251 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 242 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 239 bp overlap
CBFB 1 dataset
ChIP ME-1 GSE46044.CBFB.ME-1 238 bp overlap
CDK9 1 dataset
ChIP HCT-116 GSE72622.CDK9.HCT-116 218 bp overlap
CTCF 29 datasets
ChIP GM23338 ENCFF772DML 177 bp overlap
ChIP HepG2 ENCFF757EKU 221 bp overlap
ChIP K-562 GSE70764.CTCF.K-562 195 bp overlap
ChIP K-562_MonoC GSE137216.CTCF.K-562_MonoC 238 bp overlap
ChIP K-562_MonoN GSE137216.CTCF.K-562_MonoN 80 bp overlap
ChIP K-562_enCRISPRi-KL GSE132212.CTCF.K-562_enCRISPRi-KL 75 bp overlap
ChIP K562 ENCFF400DFR 179 bp overlap
ChIP Kelly_resistant GSE103030.CTCF.Kelly_resistant 199 bp overlap
ChIP Kelly_resistant_JQ1 GSE103030.CTCF.Kelly_resistant_JQ1 132 bp overlap
ChIP Kelly_sensitive GSE103030.CTCF.Kelly_sensitive 217 bp overlap
ChIP Kelly_shB4-res GSE115248.CTCF.Kelly_shB4-res 140 bp overlap
ChIP NB69 GSE101295.CTCF.NB69 152 bp overlap
ChIP SH-SY5Y GSE101295.CTCF.SH-SY5Y 157 bp overlap
ChIP SK-N-SH ENCSR000EIC.CTCF.SK-N-SH 177 bp overlap
ChIP SK-N-SH ENCSR000DXQ.CTCF.SK-N-SH 126 bp overlap
ChIP T-47D_NaCl-isotonic GSE111923.CTCF.T-47D_NaCl-isotonic 236 bp overlap
ChIP T-47D_NaCl-isotonic-triptolide GSE111923.CTCF.T-47D_NaCl-isotonic-triptolide 226 bp overlap
ChIP T-47D_Y537S GSE148277.CTCF.T-47D_Y537S 257 bp overlap
ChIP WA01 ENCSR000BNH.CTCF.WA01 55 bp overlap
ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 116 bp overlap
ChIP WERI-Rb-1 ENCFF349QKF 176 bp overlap
ChIP WERI-Rb-1 ENCSR000DXW.CTCF.WERI-Rb-1 125 bp overlap
ChIP endodermal cell ENCFF471YCZ 277 bp overlap
ChIP hiPSC_IB12 GSE106870.CTCF.hiPSC_IB12 260 bp overlap
ChIP hiPSC_IB7 GSE106870.CTCF.hiPSC_IB7 130 bp overlap
ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 158 bp overlap
ChIP neural progenitor cell ENCFF420RBO 277 bp overlap
ChIP neuroblastoma GSE115862.CTCF.neuroblastoma 148 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 120 bp overlap
CTCFL 1 dataset
ChIP K-562 GSE70764.CTCFL.K-562 168 bp overlap
DNMT3B 1 dataset
ChIP HUES-8_TripleKO-TET1-2-3 GSE99346.DNMT3B.HUES-8_TripleKO-TET1-2-3 277 bp overlap
EMSY 1 dataset
ChIP K562 ENCFF511ZZZ 217 bp overlap
EP300 1 dataset
ChIP WA01 ENCSR000AUQ.EP300.WA01 177 bp overlap
ERG 3 datasets
ChIP CD34_NR29 GSE23730.ERG.CD34_NR29 267 bp overlap
ChIP MCF-7 GSE23730.ERG.MCF-7 55 bp overlap
ChIP ME-1 GSE46044.ERG.ME-1 222 bp overlap
ESR1 3 datasets
ChIP Ishikawa GSE99905.ESR1.Ishikawa 277 bp overlap
ChIP Ishikawa_DMSO_D538G_clone3 GSE132426.ESR1.Ishikawa_DMSO_D538G_clone3 82 bp overlap
ChIP MCF-7_PaPE-1 GSE93510.ESR1.MCF-7_PaPE-1 200 bp overlap
EZH2 5 datasets
ChIP A-1847_CARM1-KO GSE95643.EZH2.A-1847_CARM1-KO 277 bp overlap
ChIP Karpas-422_CPI360-D8 GSE134136.EZH2.Karpas-422_CPI360-D8 188 bp overlap
ChIP SU-DHL-6 GSE134136.EZH2.SU-DHL-6 277 bp overlap
ChIP SU-DHL-6_DMSO GSE134136.EZH2.SU-DHL-6_DMSO 229 bp overlap
ChIP THP-1 GSE135024.EZH2.THP-1 246 bp overlap
FLI1 1 dataset
ChIP UAE_ZINC GSE23730.FLI1.UAE_ZINC 277 bp overlap
FOXA1 1 dataset
ChIP LNCaP_SHGATA2_R1881 GSE69043.FOXA1.LNCaP_SHGATA2_R1881 105 bp overlap
FOXJ3 1 dataset
ChIP SK-N-SH ENCFF124KVL 231 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 168 bp overlap
HAND2 3 datasets
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 277 bp overlap
ChIP Kelly GSE94822.HAND2.Kelly 277 bp overlap
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 249 bp overlap
HEXIM1 1 dataset
ChIP HCT-116 GSE72622.HEXIM1.HCT-116 255 bp overlap
HNRNPL 3 datasets
ChIP Hep-G2 GSE120104.HNRNPL.Hep-G2 254 bp overlap
ChIP Hep-G2 ENCSR315JJE.HNRNPL.Hep-G2 254 bp overlap
ChIP HepG2 ENCFF684GAM 184 bp overlap
HNRNPLL 3 datasets
ChIP Hep-G2 ENCSR804HMZ.HNRNPLL.Hep-G2 202 bp overlap
ChIP HepG2 ENCFF355PIC 88 bp overlap
ChIP K-562 ENCSR112RNT.HNRNPLL.K-562 216 bp overlap
HOXA3 1 dataset
ChIP Hep-G2 ENCSR999JKC.HOXA3.Hep-G2 199 bp overlap
JARID2 1 dataset
ChIP AMIPS6 GSE48516.JARID2.AMIPS6 205 bp overlap
KDM4B 1 dataset
ChIP K-562 ENCSR642VZY.KDM4B.K-562 143 bp overlap
KDM5B 1 dataset
ChIP Hep-G2 ENCSR227MRE.KDM5B.Hep-G2 273 bp overlap
MAF1 1 dataset
ChIP THP-1_macrophage_PMA GSE96800.MAF1.THP-1_macrophage_PMA 209 bp overlap
MAX 1 dataset
ChIP NCI-H2171 GSE36354.MAX.NCI-H2171 186 bp overlap
MCRS1 2 datasets
ChIP Hep-G2 GSE107730.MCRS1.Hep-G2 232 bp overlap
ChIP Hep-G2 GSE97411.MCRS1.Hep-G2 232 bp overlap
MNX1 1 dataset
ChIP Hep-G2 ENCSR108MKR.MNX1.Hep-G2 191 bp overlap
MORC2 1 dataset
ChIP H9 GSE95374.MORC2.H9 184 bp overlap
MTA1 1 dataset
ChIP Hep-G2 ENCSR983KRB.MTA1.Hep-G2 277 bp overlap
MYCN 5 datasets
ChIP COG-N-415 GSE138295.MYCN.COG-N-415 277 bp overlap
ChIP Kelly GSE94782.MYCN.Kelly 219 bp overlap
ChIP Kelly GSE94822.MYCN.Kelly 215 bp overlap
ChIP Kelly_sensitive GSE115249.MYCN.Kelly_sensitive 211 bp overlap
ChIP LA-N-5 GSE138295.MYCN.LA-N-5 212 bp overlap
NANOG 3 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 208 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 189 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 196 bp overlap
NCAPH2 1 dataset
ChIP HEK293 GSE97540.NCAPH2.HEK293 230 bp overlap
NFATC3 1 dataset
ChIP Hep-G2 GSE97661.NFATC3.Hep-G2 68 bp overlap
NFE2 2 datasets
ChIP K-562 ENCSR000FCC.NFE2.K-562 76 bp overlap
ChIP K562 ENCFF047YKA 212 bp overlap
NFKB1 1 dataset
ChIP HEK293T_2KR GSE129618.NFKB1.HEK293T_2KR 157 bp overlap
NRL 1 dataset
ChIP HepG2 ENCFF528PUT 78 bp overlap
OGG1 4 datasets
ChIP HEK293 GSE89017.OGG1.HEK293 277 bp overlap
ChIP HEK293_15min GSE89017.OGG1.HEK293_15min 277 bp overlap
ChIP HEK293_30_min GSE89017.OGG1.HEK293_30_min 205 bp overlap
ChIP HEK293_60_min GSE89017.OGG1.HEK293_60_min 277 bp overlap
OLIG2 1 dataset
ChIP brain-prefrontal-cortex_2018006 GSE129039.OLIG2.brain-prefrontal-cortex_2018006 116 bp overlap
PCBP1 1 dataset
ChIP K562 ENCFF382QWQ 135 bp overlap
PHF8 1 dataset
ChIP Hep-G2 ENCSR604VAE.PHF8.Hep-G2 197 bp overlap
POLR2A 2 datasets
ChIP H1 ENCFF566JSR 145 bp overlap
ChIP H1 ENCFF566JSR 277 bp overlap
POU5F1 5 datasets
ChIP BG03 GSE21614.POU5F1.BG03 178 bp overlap
ChIP DE_D1 DED1-OCT4_Batch_II 277 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 271 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 277 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 256 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 277 bp overlap
PRDM15 1 dataset
ChIP WTC11 ENCFF108TMF 226 bp overlap
RAD21 4 datasets
ChIP H1 ENCFF698EWO 166 bp overlap
ChIP IMR-5 GSE78957.RAD21.IMR-5 221 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.RAD21.hiPSC_failed-genome-editing 132 bp overlap
ChIP hiPSC_parental-line GSE106870.RAD21.hiPSC_parental-line 133 bp overlap
RARA 1 dataset
ChIP TSU-1621MT GSE60477.RARA.TSU-1621MT 192 bp overlap
RBFOX2 2 datasets
ChIP HepG2 ENCFF554DMZ 233 bp overlap
ChIP HepG2 ENCFF939HTZ 242 bp overlap
RBM39 1 dataset
ChIP Hep-G2 ENCSR339JTP.RBM39.Hep-G2 206 bp overlap
RELA 2 datasets
ChIP HEK293_60_min GSE89017.RELA.HEK293_60_min 84 bp overlap
ChIP HEK293_TNF-1h GSE75562.RELA.HEK293_TNF-1h 277 bp overlap
REPIN1 1 dataset
ChIP HepG2 ENCFF598VSY 277 bp overlap
RORC 2 datasets
ChIP HCC70 GSE126380.RORC.HCC70 245 bp overlap
ChIP HCC70_XY018 GSE126380.RORC.HCC70_XY018 277 bp overlap
RUNX1 2 datasets
ChIP AML GSE111821.RUNX1.AML 73 bp overlap
ChIP K-562 ENCSR588AKU.RUNX1.K-562 114 bp overlap
RXR 1 dataset
ChIP TSU-1621MT GSE60477.RXR.TSU-1621MT 226 bp overlap
SALL2 1 dataset
ChIP HEK293_E1 GSE145940.SALL2.HEK293_E1 52 bp overlap
SMAD3 1 dataset
ChIP WTC11 ENCFF815YYQ 261 bp overlap
SMARCA4 1 dataset
ChIP NGP_ARID1A-het GSE134626.SMARCA4.NGP_ARID1A-het 178 bp overlap
SP1 1 dataset
ChIP HEK293 GSE76494.SP1.HEK293 197 bp overlap
SREBP2 2 datasets
ChIP HCC70 GSE126380.SREBP2.HCC70 274 bp overlap
ChIP HCC70_XY018 GSE126380.SREBP2.HCC70_XY018 229 bp overlap
SRSF1 1 dataset
ChIP Hep-G2 GSE120104.SRSF1.Hep-G2 177 bp overlap
STAT1 1 dataset
ChIP CD14 GSE43036.STAT1.CD14 156 bp overlap
STAT3 1 dataset
ChIP WA01 ERP004237.STAT3.WA01 262 bp overlap
SUZ12 1 dataset
ChIP Aska-SS GSE108025.SUZ12.Aska-SS 277 bp overlap
T 1 dataset
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 138 bp overlap
TAF1 1 dataset
ChIP Hep-G2 ENCSR918OKK.TAF1.Hep-G2 156 bp overlap
TAF15 4 datasets
ChIP Hep-G2 GSE120104.TAF15.Hep-G2 186 bp overlap
ChIP Hep-G2 ENCSR825MZS.TAF15.Hep-G2 178 bp overlap
ChIP HepG2 ENCFF116QSW 160 bp overlap
ChIP HepG2 ENCFF406BOT 141 bp overlap
TBX2 1 dataset
ChIP Kelly GSE94822.TBX2.Kelly 221 bp overlap
TCF7 1 dataset
ChIP breast-organoid_BRCA1-mut GSE113909.TCF7.breast-organoid_BRCA1-mut 277 bp overlap
TEAD4 1 dataset
ChIP H1 ENCFF778PAX 115 bp overlap
TFAP2B 1 dataset
ChIP SK-N-SH ENCFF869XXQ 277 bp overlap
TFAP2C 2 datasets
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 277 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 277 bp overlap
TFIIIC 1 dataset
ChIP HEK293 GSE119418.TFIIIC.HEK293 259 bp overlap
TRIM25 1 dataset
ChIP BT-549 GSE79588.TRIM25.BT-549 183 bp overlap
TRIM28 3 datasets
ChIP HCT-116 GSE72622.TRIM28.HCT-116 127 bp overlap
ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 138 bp overlap
ChIP hESC GSE115387.TRIM28.hESC 185 bp overlap
WDR5 1 dataset
ChIP SMMC-7721 GSE126982.WDR5.SMMC-7721 260 bp overlap
ZBTB33 1 dataset
ChIP HepG2 ENCFF778UKV 162 bp overlap
ZBTB38 2 datasets
ChIP HepG2 ENCFF875UQX 177 bp overlap
ChIP HepG2 ENCFF875UQX 277 bp overlap
ZBTB48 2 datasets
ChIP U2OS GSE96776.ZBTB48.U2OS 277 bp overlap
ChIP U2OS_ZBTB48-KO GSE96776.ZBTB48.U2OS_ZBTB48-KO 277 bp overlap
ZBTB7A 1 dataset
ChIP VCaP_DHT GSE123089.ZBTB7A.VCaP_DHT 254 bp overlap
ZFP91 1 dataset
ChIP HepG2 ENCFF012CME 277 bp overlap
ZFX 2 datasets
ChIP HEK293T_FLAG GSE145160.ZFX.HEK293T_FLAG 277 bp overlap
ChIP HepG2 ENCFF016NZF 277 bp overlap
ZNF232 2 datasets
ChIP WTC11 ENCFF901BGD 256 bp overlap
ChIP WTC11 ENCFF901BGD 252 bp overlap
ZNF687 1 dataset
ChIP HepG2 ENCFF653WIX 277 bp overlap
ZNF736 1 dataset
ChIP HEK293T GSE78099.ZNF736.HEK293T 121 bp overlap