chr6 : 24,909,909 24,910,200
291 bp 77 TFs 1 linked gene
This 291 bp open chromatin element is linked to RIPOR2 and is bound by 77 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
RIPOR2 869 bp At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:24,904,909 – 24,915,200
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
77 transcription factors
Source
Cell type
AR 3 datasets
ChIP LNCaP-95_NT GSE125552.AR.LNCaP-95_NT 102 bp overlap
ChIP prostate_cancer-associated-fibroblasts GSE90772.AR.prostate_cancer-associated-fibroblasts 291 bp overlap
ChIP prostate_fetal-fibroblast GSE90772.AR.prostate_fetal-fibroblast 142 bp overlap
ASH2L 1 dataset
ChIP GM12878 ENCSR849WCQ.ASH2L.GM12878 208 bp overlap
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 161 bp overlap
BCL11B 1 dataset
ChIP thymus_CD34neg GSE84677.BCL11B.thymus_CD34neg 201 bp overlap
BCL6 1 dataset
ChIP SU-DHL-4 GSE119038.BCL6.SU-DHL-4 291 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 279 bp overlap
BRD3 1 dataset
ChIP K-562_iBET-BD1-IFNG GSE138084.BRD3.K-562_iBET-BD1-IFNG 219 bp overlap
BRD4 11 datasets
ChIP CLL_patient1 GSE109411.BRD4.CLL_patient1 152 bp overlap
ChIP CLL_patient1_4h_CpG_BET GSE109411.BRD4.CLL_patient1_4h_CpG_BET 86 bp overlap
ChIP CLL_patient4_4h_CpG_BET GSE109411.BRD4.CLL_patient4_4h_CpG_BET 66 bp overlap
ChIP LNCaP-clone-FGC_DHT-ABBV-744 GSE118247.BRD4.LNCaP-clone-FGC_DHT-ABBV-744 136 bp overlap
ChIP LNCaP-clone-FGC_DHT-DMSO GSE118247.BRD4.LNCaP-clone-FGC_DHT-DMSO 291 bp overlap
ChIP LNCaP-clone-FGC_DHT-Enzalutamide GSE118247.BRD4.LNCaP-clone-FGC_DHT-Enzalutamide 284 bp overlap
ChIP NCI-H1963_shNONT GSE145028.BRD4.NCI-H1963_shNONT 98 bp overlap
ChIP SEM GSE83671.BRD4.SEM 291 bp overlap
ChIP SUM229PE_neg_30nMtrametinib_24h GSE87418.BRD4.SUM229PE_neg_30nMtrametinib_24h 291 bp overlap
ChIP cortical-interneuron_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_KCl-pos_JQ1-neg 229 bp overlap
ChIP retina_AB1-FW23 GSE86981.BRD4.retina_AB1-FW23 291 bp overlap
CHD4 2 datasets
ChIP GM12878 ENCSR751CJG.CHD4.GM12878 60 bp overlap
ChIP RH5 GSE155861.CHD4.RH5 227 bp overlap
CREBBP 1 dataset
ChIP tonsil_GCBC_p5 GSE89688.CREBBP.tonsil_GCBC_p5 291 bp overlap
CTBP2 1 dataset
ChIP WA01 ENCSR000EUO.CTBP2.WA01 242 bp overlap
CTCF 60 datasets
ChIP B cell ENCFF506FKC 174 bp overlap
ChIP B-cell ENCSR000AUV.CTCF.B-cell 291 bp overlap
ChIP BJAB GSE31485.CTCF.BJAB 93 bp overlap
ChIP CD4-positive, alpha-beta T cell ENCFF277LDE 61 bp overlap
ChIP DOHH2 ENCSR084RDK.CTCF.DOHH2 291 bp overlap
ChIP GM04025_B-lymphocytes GSE111170.CTCF.GM04025_B-lymphocytes 291 bp overlap
ChIP GM04604 GSE148179.CTCF.GM04604 291 bp overlap
ChIP GM04648 GSE148179.CTCF.GM04648 277 bp overlap
ChIP GM06077 GSE148179.CTCF.GM06077 291 bp overlap
ChIP GM09236__B-lymphocytes GSE111170.CTCF.GM09236__B-lymphocytes 220 bp overlap
ChIP GM09237_B-lymphocytes GSE111170.CTCF.GM09237_B-lymphocytes 291 bp overlap
ChIP GM12866 ENCSR000DRF.CTCF.GM12866 113 bp overlap
ChIP GM12867 ENCSR000DRH.CTCF.GM12867 113 bp overlap
ChIP GM12869 ENCSR000DRJ.CTCF.GM12869 156 bp overlap
ChIP GM12870 ENCSR000DRK.CTCF.GM12870 133 bp overlap
ChIP GM12871 ENCSR000DRL.CTCF.GM12871 141 bp overlap
ChIP GM12873 ENCFF711LOS 259 bp overlap
ChIP GM12874 ENCSR000DRR.CTCF.GM12874 216 bp overlap
ChIP GM12875 ENCFF081UCQ 257 bp overlap
ChIP GM12878 ENCFF511URZ 205 bp overlap
ChIP GM12878 ENCFF635MMB 217 bp overlap
ChIP GM12878 GSE76922.CTCF.GM12878 291 bp overlap
ChIP GM12878 ENCSR000DKV.CTCF.GM12878 250 bp overlap
ChIP GM17942 GSE76922.CTCF.GM17942 291 bp overlap
ChIP GM20000 ENCFF217HWJ 137 bp overlap
ChIP GM20000 ENCFF218HKS 137 bp overlap
ChIP GM20000 ENCSR000DLG.CTCF.GM20000 107 bp overlap
ChIP GM23338 ENCFF772DML 201 bp overlap
ChIP H1 ENCFF764RHO 246 bp overlap
ChIP HSPC-CD34 GSE107147.CTCF.HSPC-CD34 95 bp overlap
ChIP ID00015 GSE76922.CTCF.ID00015 174 bp overlap
ChIP ID00016 GSE76922.CTCF.ID00016 291 bp overlap
ChIP KARPAS422 ENCSR113REG.CTCF.KARPAS422 291 bp overlap
ChIP Kelly_sensitive GSE103030.CTCF.Kelly_sensitive 139 bp overlap
ChIP LNCaP clone FGC ENCFF957KCI 167 bp overlap
ChIP OCI-Ly1 ENCSR072EUE.CTCF.OCI-Ly1 291 bp overlap
ChIP OCI-Ly7 ENCSR027HML.CTCF.OCI-Ly7 291 bp overlap
ChIP SU-DHL-6 ENCFF116KKR 82 bp overlap
ChIP SU-DHL-6 ENCSR125DKL.CTCF.SU-DHL-6 291 bp overlap
ChIP WA01 ENCSR000BNH.CTCF.WA01 244 bp overlap
ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 139 bp overlap
ChIP activated CD4-positive, alpha-beta T cell ENCFF095PZX 205 bp overlap
ChIP brain ENCFF685VRG 291 bp overlap
ChIP brain ENCFF685VRG 67 bp overlap
ChIP cortical-interneuron_KCl-neg_JQ1-neg GSE117508.CTCF.cortical-interneuron_KCl-neg_JQ1-neg 290 bp overlap
ChIP cortical-interneuron_KCl-neg_JQ1-pos GSE117508.CTCF.cortical-interneuron_KCl-neg_JQ1-pos 291 bp overlap
ChIP cortical-interneuron_KCl-pos_JQ1-neg GSE117508.CTCF.cortical-interneuron_KCl-pos_JQ1-neg 291 bp overlap
ChIP cortical-interneuron_KCl-pos_JQ1-pos GSE117508.CTCF.cortical-interneuron_KCl-pos_JQ1-pos 291 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF483ZLP 51 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF835ZSJ 87 bp overlap
ChIP epithelial_kidney ENCSR000DVH.CTCF.epithelial_kidney 99 bp overlap
ChIP hESC_D15 GSE116862.CTCF.hESC_D15 147 bp overlap
ChIP hESC_D5 GSE116862.CTCF.hESC_D5 120 bp overlap
ChIP hiPSC_IB12 GSE106870.CTCF.hiPSC_IB12 123 bp overlap
ChIP leukemia GSE142161.CTCF.leukemia 291 bp overlap
ChIP leukemia_CEBPA-24h GSE142161.CTCF.leukemia_CEBPA-24h 227 bp overlap
ChIP neural ENCSR822CEA.CTCF.neural 291 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 255 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 265 bp overlap
ChIP plasmablast GSE142493.CTCF.plasmablast 264 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF274GAT 90 bp overlap
E2F6 1 dataset
ChIP WA01 ENCSR000BSI.E2F6.WA01 113 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 136 bp overlap
EP300 1 dataset
ChIP neural cell ENCFF442QNK 253 bp overlap
ESR1 2 datasets
ChIP MCF-7 GSE68355.ESR1.MCF-7 151 bp overlap
ChIP MCF-7_E2-ICI GSE67295.ESR1.MCF-7_E2-ICI 129 bp overlap
EZH2 4 datasets
ChIP HUVEC-C GSE109625.EZH2.HUVEC-C 291 bp overlap
ChIP HUVEC-C_VEGF_12h GSE109625.EZH2.HUVEC-C_VEGF_12h 212 bp overlap
ChIP dermal-fibroblast_Transformed GSE126396.EZH2.dermal-fibroblast_Transformed 100 bp overlap
ChIP epithelial_mammary ENCSR000ARE.EZH2.epithelial_mammary 155 bp overlap
GABPA 1 dataset
ChIP RWPE-1 GSE29808.GABPA.RWPE-1 212 bp overlap
GATA2 1 dataset
ChIP ME-1_CBFB-MYH11-KD GSE117138.GATA2.ME-1_CBFB-MYH11-KD 224 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 224 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 291 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 291 bp overlap
GATA6 9 datasets
ChIP DE_D1 S09-DE-d1-GATA6-exp1 291 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 291 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 291 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 291 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 291 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 291 bp overlap
ChIP PATU8988 GSE47535.GATA6.PATU8988 105 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 285 bp overlap
ChIP foregut GSE117136.GATA6.foregut 259 bp overlap
HCFC1 1 dataset
ChIP GM12878 ENCSR514VAY.HCFC1.GM12878 149 bp overlap
HDAC2 1 dataset
ChIP PC-3 GSE147455.HDAC2.PC-3 109 bp overlap
IKZF1 1 dataset
ChIP pre-B-cell GSE107886.IKZF1.pre-B-cell 291 bp overlap
IKZF2 1 dataset
ChIP GM12878 ENCSR680UQE.IKZF2.GM12878 248 bp overlap
IRF4 2 datasets
ChIP GM12878 ENCSR000BGY.IRF4.GM12878 142 bp overlap
ChIP T-cell GSE136853.IRF4.T-cell 159 bp overlap
JARID2 2 datasets
ChIP UTEIPS11 GSE48516.JARID2.UTEIPS11 210 bp overlap
ChIP UTEIPS7 GSE48516.JARID2.UTEIPS7 55 bp overlap
KDM1A 2 datasets
ChIP pancreatic-progenitor_GT GSE104840.KDM1A.pancreatic-progenitor_GT 199 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 251 bp overlap
KDM4A 1 dataset
ChIP WA01 ENCSR000AVC.KDM4A.WA01 178 bp overlap
KMT2A 1 dataset
ChIP blood_cord GSE83671.KMT2A.blood_cord 291 bp overlap
MAX 1 dataset
ChIP H1 ENCFF914VQY 262 bp overlap
MED1 2 datasets
ChIP G296S_4 GSE85628.MED1.G296S_4 62 bp overlap
ChIP cardiomyocyte_5 GSE85628.MED1.cardiomyocyte_5 291 bp overlap
MED26 1 dataset
ChIP HEK293T GSE121024.MED26.HEK293T 175 bp overlap
MEF2B 1 dataset
ChIP tonsil GSE110682.MEF2B.tonsil 239 bp overlap
MLLT1 1 dataset
ChIP GM12878 ENCSR552XSN.MLLT1.GM12878 141 bp overlap
MTA2 1 dataset
ChIP pre-B-cell GSE107886.MTA2.pre-B-cell 99 bp overlap
MXI1 1 dataset
ChIP neural cell ENCFF623HQN 291 bp overlap
MYC 1 dataset
ChIP LNCaP_MYC GSE73994.MYC.LNCaP_MYC 88 bp overlap
NBN 1 dataset
ChIP GM12878 ENCSR278SQL.NBN.GM12878 162 bp overlap
PAX5 1 dataset
ChIP GM12878 ENCSR000BHD.PAX5.GM12878 148 bp overlap
PHF19 1 dataset
ChIP DU145_CTR GSE135623.PHF19.DU145_CTR 205 bp overlap
POLR2A 3 datasets
ChIP Raji ENCFF613VGX 167 bp overlap
ChIP neural cell ENCFF604SPB 110 bp overlap
ChIP neural cell ENCFF604SPB 240 bp overlap
POU5F1 1 dataset
ChIP HUES-8 GSE109524.POU5F1.HUES-8 177 bp overlap
PRDM14 1 dataset
ChIP NCCIT GSE71675.PRDM14.NCCIT 291 bp overlap
RAD21 7 datasets
ChIP GM12878 ENCFF101UQZ 191 bp overlap
ChIP GM12878 ENCSR000BMY.RAD21.GM12878 143 bp overlap
ChIP H1 ENCFF698EWO 241 bp overlap
ChIP H1 ENCFF967OJF 234 bp overlap
ChIP LoVo_PHASEM GSE51290.RAD21.LoVo_PHASEM 208 bp overlap
ChIP hiPSC_IB12 GSE106870.RAD21.hiPSC_IB12 143 bp overlap
ChIP neural cell ENCFF564MOT 291 bp overlap
RB1 1 dataset
ChIP GM12878 ENCSR785OKZ.RB1.GM12878 291 bp overlap
RBBP4 1 dataset
ChIP SCMC GSE155861.RBBP4.SCMC 291 bp overlap
RBM39 1 dataset
ChIP K-562 ENCSR764OXF.RBM39.K-562 175 bp overlap
RELB 1 dataset
ChIP GM12878 ENCSR387QUV.RELB.GM12878 291 bp overlap
SAP30 1 dataset
ChIP WA01 ENCSR000ATR.SAP30.WA01 138 bp overlap
SIN3A 4 datasets
ChIP H1 ENCFF042ZSL 291 bp overlap
ChIP H1 ENCFF896IJG 195 bp overlap
ChIP WA01 ENCSR000EBO.SIN3A.WA01 193 bp overlap
ChIP WA01 ENCSR000BIS.SIN3A.WA01 107 bp overlap
SMARCA4 2 datasets
ChIP Aska-SS GSE108025.SMARCA4.Aska-SS 72 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 214 bp overlap
SMARCB1 1 dataset
ChIP proliferating-human-fibroblast_ASO_LINC GSE131711.SMARCB1.proliferating-human-fibroblast_ASO_LINC 221 bp overlap
SMC3 2 datasets
ChIP neural cell ENCFF795YGY 291 bp overlap
ChIP neural cell ENCFF795YGY 291 bp overlap
SP1 2 datasets
ChIP WA01 ENCSR000BIR.SP1.WA01 109 bp overlap
ChIP WTC11 ENCFF688PEU 291 bp overlap
SPI1 2 datasets
ChIP GM12891 ENCFF563IUT 212 bp overlap
ChIP GM12891 ENCSR000BIJ.SPI1.GM12891 133 bp overlap
STAT5A 1 dataset
ChIP GM12878 ENCFF267JUM 291 bp overlap
SUZ12 2 datasets
ChIP Aska-SS GSE108025.SUZ12.Aska-SS 122 bp overlap
ChIP hiPSC GSE124903.SUZ12.hiPSC 205 bp overlap
T 1 dataset
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 136 bp overlap
TAF1 1 dataset
ChIP neural ENCSR000BTX.TAF1.neural 115 bp overlap
TAF7 1 dataset
ChIP H1 ENCFF061XZZ 66 bp overlap
TBX21 1 dataset
ChIP GM12878 ENCSR739IHN.TBX21.GM12878 291 bp overlap
TCF12 1 dataset
ChIP WA01 ENCSR000BIT.TCF12.WA01 240 bp overlap
TFAP2C 3 datasets
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 156 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 78 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 167 bp overlap
YY1 2 datasets
ChIP GM12892 ENCSR000BLT.YY1.GM12892 116 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 88 bp overlap
ZBTB2 1 dataset
ChIP GM12878 GSE97661.ZBTB2.GM12878 140 bp overlap
ZMYM3 1 dataset
ChIP GM12878 GSE97661.ZMYM3.GM12878 203 bp overlap
ZNF121 1 dataset
ChIP WTC11 ENCFF291API 250 bp overlap