chr5 : 159,095,813 159,096,967
1,154 bp 82 TFs 2 linked genes
This 1.2 kb open chromatin element is linked to EBF1 and LINC02202 and is bound by 82 transcription factors.
Linked Genes
2 genes
Distance
Gene Expression Dist. to TSS Distance Link type
EBF1 at TSS At TSS Proximity
LINC02202 3.5 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:159,090,813 – 159,101,967
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
82 transcription factors
Source
Cell type
AR 2 datasets
ChIP prostate_cancer-associated-fibroblasts GSE90772.AR.prostate_cancer-associated-fibroblasts 221 bp overlap
ChIP prostate_fetal-fibroblast GSE90772.AR.prostate_fetal-fibroblast 132 bp overlap
ARID2 1 dataset
ChIP Aska-SS GSE108025.ARID2.Aska-SS 255 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 634 bp overlap
ATF1 1 dataset
ChIP HCT-116 GSE130477.ATF1.HCT-116 116 bp overlap
BRD4 6 datasets
ChIP 402-91 GSE111253.BRD4.402-91 288 bp overlap
ChIP CLL_patient2_4h_CpG_BET GSE109411.BRD4.CLL_patient2_4h_CpG_BET 427 bp overlap
ChIP DND41_E GSE54379.BRD4.DND41_E 193 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 273 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 527 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 594 bp overlap
CBX7 3 datasets
ChIP HEK293T_PCGF2fl GSE119618.CBX7.HEK293T_PCGF2fl 153 bp overlap
ChIP hESC GSE133412.CBX7.hESC 160 bp overlap
ChIP hESC_TKO GSE133412.CBX7.hESC_TKO 156 bp overlap
CDK9 3 datasets
ChIP P493-6 GSE36354.CDK9.P493-6 171 bp overlap
ChIP P493-6 GSE36354.CDK9.P493-6 276 bp overlap
ChIP P493-6 GSE36354.CDK9.P493-6 223 bp overlap
CDKN1B 1 dataset
ChIP MDA-MB-231_p27CK-DD GSE112444.CDKN1B.MDA-MB-231_p27CK-DD 182 bp overlap
CHD1 2 datasets
ChIP WA01 ENCSR000AQK.CHD1.WA01 358 bp overlap
ChIP hMSC-TERT GSE89179.CHD1.hMSC-TERT 305 bp overlap
CHD2 1 dataset
ChIP GM12878 ENCFF697XCL 381 bp overlap
CTBP2 2 datasets
ChIP WA01 ENCSR000EUO.CTBP2.WA01 422 bp overlap
ChIP WA01 ENCSR000EUO.CTBP2.WA01 469 bp overlap
CTCF 7 datasets
ChIP artery_tibial ENCSR699BEK.CTCF.artery_tibial 218 bp overlap
ChIP endodermal cell ENCFF471YCZ 461 bp overlap
ChIP endodermal cell ENCFF471YCZ 461 bp overlap
ChIP endothelial_brain-microvascular ENCSR000DTA.CTCF.endothelial_brain-microvascular 124 bp overlap
ChIP fibroblast_CARDIAC ENCSR000DTF.CTCF.fibroblast_CARDIAC 123 bp overlap
ChIP hESC_D5 GSE116862.CTCF.hESC_D5 244 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 180 bp overlap
Cebpa 4 datasets
ChIP BLaER1 ENCFF031ISE 446 bp overlap
ChIP BLaER1 ENCFF335XTP 295 bp overlap
ChIP BLaER1 ENCFF364PUR 260 bp overlap
ChIP BLaER1 ENCFF364PUR 281 bp overlap
E2F6 2 datasets
ChIP H1 ENCFF785DWK 451 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 330 bp overlap
EBF1 2 datasets
ChIP GM12878 ENCFF167CZS 321 bp overlap
ChIP GM12878 ENCSR000DZQ.EBF1.GM12878 212 bp overlap
ELF1 1 dataset
ChIP GM12878 ENCSR000BMB.ELF1.GM12878 237 bp overlap
ERG 1 dataset
ChIP SEM GSE117864.ERG.SEM 525 bp overlap
ESR1 2 datasets
ChIP MCF-7_PaPE-1 GSE93510.ESR1.MCF-7_PaPE-1 417 bp overlap
ChIP MCF-7_PaPE-1_OA GSE93510.ESR1.MCF-7_PaPE-1_OA 309 bp overlap
EZH2 19 datasets
ChIP A-1847_CARM1-KO GSE95643.EZH2.A-1847_CARM1-KO 620 bp overlap
ChIP GM23338 ENCFF613YON 160 bp overlap
ChIP GM23338 ENCFF613YON 1089 bp overlap
ChIP GM23338 ENCFF886DXX 193 bp overlap
ChIP GM23338 ENCFF886DXX 407 bp overlap
ChIP H1 ENCFF232NZA 1154 bp overlap
ChIP Hep-3B2-1-7 GSE128137.EZH2.Hep-3B2-1-7 122 bp overlap
ChIP LNCaP GSE39459.EZH2.LNCaP 195 bp overlap
ChIP astrocyte ENCFF365JTP 154 bp overlap
ChIP astrocyte ENCFF365JTP 785 bp overlap
ChIP astrocyte ENCFF365JTP 592 bp overlap
ChIP hESC_KO GSE113817.EZH2.hESC_KO 317 bp overlap
ChIP hepatocyte ENCFF118DKH 357 bp overlap
ChIP hepatocyte ENCFF552DZB 768 bp overlap
ChIP hepatocyte ENCFF552DZB 201 bp overlap
ChIP mammary epithelial cell ENCFF224GAI 491 bp overlap
ChIP myotube ENCSR000ASZ.EZH2.myotube 300 bp overlap
ChIP neural progenitor cell ENCFF018MKA 1154 bp overlap
ChIP neural progenitor cell ENCFF472NFV 1154 bp overlap
EZH2_phosphoT487 4 datasets
ChIP GM23338 ENCSR591DTH.EZH2_phosphoT487.GM23338 551 bp overlap
ChIP PC-9 ENCSR702GMW.EZH2_phosphoT487.PC-9 460 bp overlap
ChIP PC-9 ENCSR702GMW.EZH2_phosphoT487.PC-9 275 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR886KKK.EZH2_phosphoT487.neuron_bipolar_doxy_4d 591 bp overlap
GABPA 2 datasets
ChIP WA01 ENCSR000BIW.GABPA.WA01 180 bp overlap
ChIP WA01 ENCSR000BIW.GABPA.WA01 206 bp overlap
GATA6 3 datasets
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 56 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 325 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 359 bp overlap
HCFC1 1 dataset
ChIP GM12878 ENCSR514VAY.HCFC1.GM12878 88 bp overlap
HDAC2 2 datasets
ChIP WA01 ENCSR000AVB.HDAC2.WA01 212 bp overlap
ChIP pre-B-cell GSE107886.HDAC2.pre-B-cell 247 bp overlap
HEXIM1 1 dataset
ChIP HCT-116 GSE72622.HEXIM1.HCT-116 359 bp overlap
HIF1A 1 dataset
ChIP BEAS-2B_arsenic GSE145834.HIF1A.BEAS-2B_arsenic 472 bp overlap
IKZF1 4 datasets
ChIP GM12878 ENCFF824TGK 641 bp overlap
ChIP GM12878 ENCFF824TGK 204 bp overlap
ChIP pre-B-cell GSE107886.IKZF1.pre-B-cell 490 bp overlap
ChIP pre-B-cell GSE107886.IKZF1.pre-B-cell 360 bp overlap
IKZF2 2 datasets
ChIP GM12878 ENCFF238LYK 601 bp overlap
ChIP GM12878 ENCFF918AID 551 bp overlap
IKZF3 2 datasets
ChIP pre-B-cell GSE107886.IKZF3.pre-B-cell 304 bp overlap
ChIP pre-B-cell GSE107886.IKZF3.pre-B-cell 394 bp overlap
INO80 2 datasets
ChIP Hep-G2 GSE97411.INO80.Hep-G2 584 bp overlap
ChIP Huh-7 GSE97411.INO80.Huh-7 135 bp overlap
JARID2 1 dataset
ChIP hESC GSE133412.JARID2.hESC 152 bp overlap
JUN 1 dataset
ChIP HUES-8 GSE109524.JUN.HUES-8 121 bp overlap
KDM6B 1 dataset
ChIP CUTLL1 GSE56694.KDM6B.CUTLL1 57 bp overlap
MAX 2 datasets
ChIP H1 ENCFF914VQY 357 bp overlap
ChIP P493-6 GSE36354.MAX.P493-6 189 bp overlap
MED1 1 dataset
ChIP P493-6 GSE36354.MED1.P493-6 255 bp overlap
MEN1 2 datasets
ChIP SEM GSE83671.MEN1.SEM 467 bp overlap
ChIP SEM GSE83671.MEN1.SEM 301 bp overlap
MLLT1 2 datasets
ChIP GM12878 ENCFF995GXC 182 bp overlap
ChIP GM12878 ENCFF995GXC 979 bp overlap
MTA2 1 dataset
ChIP pre-B-cell GSE107886.MTA2.pre-B-cell 542 bp overlap
MXI1 2 datasets
ChIP neural ENCSR934NHU.MXI1.neural 252 bp overlap
ChIP neural cell ENCFF623HQN 605 bp overlap
MYC 2 datasets
ChIP OVCAR-3 GSE154941.MYC.OVCAR-3 278 bp overlap
ChIP P493-6_scramble-shRNA GSE101853.MYC.P493-6_scramble-shRNA 174 bp overlap
MYCN 5 datasets
ChIP COG-N-415 GSE138295.MYCN.COG-N-415 217 bp overlap
ChIP Kelly GSE94782.MYCN.Kelly 134 bp overlap
ChIP LA-N-5 GSE138295.MYCN.LA-N-5 208 bp overlap
ChIP NB-1643 GSE138295.MYCN.NB-1643 269 bp overlap
ChIP NB-1643 GSE138295.MYCN.NB-1643 214 bp overlap
NCOR2 1 dataset
ChIP LS180 GSE39277.NCOR2.LS180 100 bp overlap
NEUROD1 1 dataset
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 348 bp overlap
NFE2L2 1 dataset
ChIP A-549 GSE113497.NFE2L2.A-549 406 bp overlap
NR2F1 2 datasets
ChIP GM12878 ENCFF273VKX 505 bp overlap
ChIP GM12878 ENCSR514VYD.NR2F1.GM12878 519 bp overlap
OGG1 2 datasets
ChIP HEK293 GSE89017.OGG1.HEK293 167 bp overlap
ChIP HEK293_15min GSE89017.OGG1.HEK293_15min 177 bp overlap
PCGF2 1 dataset
ChIP HEK293T_PCGF2fl GSE119618.PCGF2.HEK293T_PCGF2fl 132 bp overlap
POLR2A 2 datasets
ChIP GM12878 ENCFF412KAE 625 bp overlap
ChIP PFSK-1 ENCFF576NIT 557 bp overlap
POU2F2 1 dataset
ChIP pre-B-cell GSE107886.POU2F2.pre-B-cell 629 bp overlap
POU5F1 3 datasets
ChIP BG03 GSE21614.POU5F1.BG03 229 bp overlap
ChIP DE_D1 DED1-OCT4_Batch_II 1154 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 175 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 128 bp overlap
PRDM14 2 datasets
ChIP NCCIT GSE71675.PRDM14.NCCIT 419 bp overlap
ChIP hESC GSE22767.PRDM14.hESC 71 bp overlap
RBPJ 1 dataset
ChIP NHEK GSE29498.RBPJ.NHEK 183 bp overlap
REST 3 datasets
ChIP CD4 GSE49570.REST.CD4 152 bp overlap
ChIP neural ENCSR000BTV.REST.neural 298 bp overlap
ChIP neural cell ENCFF882LXX 213 bp overlap
RNF2 4 datasets
ChIP H1 ENCFF239FFS 1154 bp overlap
ChIP HEK293T_PCGF1356fl_OHT GSE119618.RNF2.HEK293T_PCGF1356fl_OHT 90 bp overlap
ChIP HEK293T_PCGF135fl GSE119618.RNF2.HEK293T_PCGF135fl 57 bp overlap
ChIP HEK293T_PCGF2fl GSE119618.RNF2.HEK293T_PCGF2fl 103 bp overlap
SALL3 2 datasets
ChIP hiPSC GSE104863.SALL3.hiPSC 407 bp overlap
ChIP hiPSC GSE104863.SALL3.hiPSC 124 bp overlap
SIN3A 2 datasets
ChIP PFSK1 ENCSR000BOY.SIN3A.PFSK1 128 bp overlap
ChIP PFSK1 ENCSR000BOY.SIN3A.PFSK1 348 bp overlap
SMAD2-3 4 datasets
ChIP HUES-8 GSE109524.SMAD2-3.HUES-8 140 bp overlap
ChIP HUES-8 GSE109524.SMAD2-3.HUES-8 685 bp overlap
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 254 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 485 bp overlap
SMARCC1 2 datasets
ChIP Aska-SS GSE108025.SMARCC1.Aska-SS 398 bp overlap
ChIP ESC S25-ESC-d0-BAF155-exp1 116 bp overlap
SOX8 1 dataset
ChIP RH4_DMSO-6H GSE116344.SOX8.RH4_DMSO-6H 218 bp overlap
STAT3 1 dataset
ChIP WA01 ERP004237.STAT3.WA01 127 bp overlap
SUZ12 11 datasets
ChIP H1 ENCFF507HGF 271 bp overlap
ChIP H1 ENCFF881NFR 1154 bp overlap
ChIP HEK293T_PCGF1352fl GSE119618.SUZ12.HEK293T_PCGF1352fl 72 bp overlap
ChIP HEK293T_PCGF1356fl GSE119618.SUZ12.HEK293T_PCGF1356fl 136 bp overlap
ChIP HEK293T_PCGF1356fl_OHT GSE119618.SUZ12.HEK293T_PCGF1356fl_OHT 129 bp overlap
ChIP HEK293T_PCGF135fl GSE119618.SUZ12.HEK293T_PCGF135fl 150 bp overlap
ChIP HEK293T_PCGF135fl_OHT GSE119618.SUZ12.HEK293T_PCGF135fl_OHT 135 bp overlap
ChIP HEK293T_PCGF2fl GSE119618.SUZ12.HEK293T_PCGF2fl 145 bp overlap
ChIP HEK293T_PCGF2fl_OHT GSE119618.SUZ12.HEK293T_PCGF2fl_OHT 117 bp overlap
ChIP LNCaP GSE39459.SUZ12.LNCaP 304 bp overlap
ChIP WA01 ENCSR000EUQ.SUZ12.WA01 381 bp overlap
TAF1 1 dataset
ChIP PFSK-1 ENCFF982LZL 171 bp overlap
TBP 2 datasets
ChIP H1 ENCFF859IIO 377 bp overlap
ChIP WA01 ENCSR000ECB.TBP.WA01 159 bp overlap
TCF12 2 datasets
ChIP WA01 ENCSR000BIT.TCF12.WA01 221 bp overlap
ChIP WA01 ENCSR000BIT.TCF12.WA01 276 bp overlap
TEAD1 1 dataset
ChIP H69 GSE62274.TEAD1.H69 88 bp overlap
TFAP2C 1 dataset
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 811 bp overlap
TP63 1 dataset
ChIP breast-organoid GSE113909.TP63.breast-organoid 135 bp overlap
TRIM28 2 datasets
ChIP AF22 GSE84259.TRIM28.AF22 224 bp overlap
ChIP AF22 GSE84259.TRIM28.AF22 111 bp overlap
YY1 2 datasets
ChIP Huh-7 GSE97411.YY1.Huh-7 298 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 184 bp overlap
ZBTB33 3 datasets
ChIP GM12878 ENCSR542FLV.ZBTB33.GM12878 139 bp overlap
ChIP GM12878 ENCSR542FLV.ZBTB33.GM12878 78 bp overlap
ChIP K-562 ENCSR876GXA.ZBTB33.K-562 157 bp overlap
ZBTB40 2 datasets
ChIP GM12878 ENCFF346DYM 140 bp overlap
ChIP GM12878 ENCFF346DYM 537 bp overlap
ZBTB48 5 datasets
ChIP U2OS GSE96776.ZBTB48.U2OS 341 bp overlap
ChIP U2OS GSE96776.ZBTB48.U2OS 294 bp overlap
ChIP U2OS_ZBTB48-KO GSE96776.ZBTB48.U2OS_ZBTB48-KO 268 bp overlap
ChIP U2OS_ZBTB48-KO GSE96776.ZBTB48.U2OS_ZBTB48-KO 445 bp overlap
ChIP U2OS_ZBTB48-KO GSE96776.ZBTB48.U2OS_ZBTB48-KO 143 bp overlap
ZEB1 3 datasets
ChIP GM12878 ENCFF148RLQ 311 bp overlap
ChIP GM12878 ENCSR000BND.ZEB1.GM12878 290 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR418KUS.ZEB1.neuron_bipolar_doxy_4d 148 bp overlap
ZNF445 1 dataset
ChIP HEK293T GSE78099.ZNF445.HEK293T 267 bp overlap
ZNF506 1 dataset
ChIP HEK293T GSE78099.ZNF506.HEK293T 224 bp overlap
ZNF512 1 dataset
ChIP WTC11 ENCFF086TTM 397 bp overlap
ZNF534 1 dataset
ChIP HEK293T GSE78099.ZNF534.HEK293T 88 bp overlap