chr5 : 105,639,121 105,639,675
554 bp 106 TFs 0 linked genes
This 554 bp open chromatin element has no linked target genes and is bound by 106 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:105,634,121 – 105,644,675
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
106 transcription factors
Source
Cell type
AGO1 2 datasets
ChIP Hep-G2 ENCSR555ZMV.AGO1.Hep-G2 232 bp overlap
ChIP Hep-G2 GSE120104.AGO1.Hep-G2 232 bp overlap
ASCL1 6 datasets
Motif DE_12h DE_12h-ASCL1_MA1100.3 8 bp overlap
Motif DE_12h DE_12h-ASCL1_MA1631.2 9 bp overlap
Motif ES_0h ES_0h-ASCL1_MA1100.3 8 bp overlap
Motif ES_0h ES_0h-ASCL1_MA1631.2 9 bp overlap
ChIP NCI-H82 GSE69394.ASCL1.NCI-H82 151 bp overlap
ChIP SCLC_ASCLP_NE GSE61197.ASCL1.SCLC_ASCLP_NE 248 bp overlap
ATRX 1 dataset
ChIP metastatic-neuroblastoma_SKNFI GSE100148.ATRX.metastatic-neuroblastoma_SKNFI 218 bp overlap
Ascl2 2 datasets
Motif DE_12h DE_12h-Ascl2_MA0816.1 10 bp overlap
Motif ES_0h ES_0h-Ascl2_MA0816.1 10 bp overlap
BHLHE22 4 datasets
Motif DE_12h DE_12h-BHLHE22_MA1635.2 6 bp overlap
Motif DE_12h DE_12h-BHLHE22_MA1635.2 6 bp overlap
Motif DE_12h DE_12h-BHLHE22_MA1635.2 6 bp overlap
Motif ES_0h ES_0h-BHLHE22_MA1635.2 6 bp overlap
BRD2 2 datasets
ChIP MV4-11_IBET151_500nM GSE120715.BRD2.MV4-11_IBET151_500nM 171 bp overlap
ChIP THP-1_iBET GSE138084.BRD2.THP-1_iBET 396 bp overlap
BRD4 11 datasets
ChIP BE2C GSE80151.BRD4.BE2C 379 bp overlap
ChIP COLO-741 GSE73319.BRD4.COLO-741 228 bp overlap
ChIP HEK293_Ctrl GSE129407.BRD4.HEK293_Ctrl 305 bp overlap
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 554 bp overlap
ChIP RH4_shCHD4 GSE140115.BRD4.RH4_shCHD4 501 bp overlap
ChIP RH4_shscr GSE140115.BRD4.RH4_shscr 201 bp overlap
ChIP SK-N-BE2-C GSE80151.BRD4.SK-N-BE2-C 379 bp overlap
ChIP SK-N-BE2-C_Naive-veh GSE107706.BRD4.SK-N-BE2-C_Naive-veh 527 bp overlap
ChIP SK-N-BE2-C_Resistant-veh GSE107706.BRD4.SK-N-BE2-C_Resistant-veh 141 bp overlap
ChIP T-47D ERP003925.BRD4.T-47D 339 bp overlap
ChIP hESC GSE33281.BRD4.hESC 61 bp overlap
CHD8 1 dataset
ChIP T-47D_ETOH_45 GSE62428.CHD8.T-47D_ETOH_45 155 bp overlap
CTCF 8 datasets
ChIP 786-O_NORMOXIA GSE78113.CTCF.786-O_NORMOXIA 241 bp overlap
ChIP BE2C ENCFF757SRF 317 bp overlap
ChIP BE2C ENCSR000DQD.CTCF.BE2C 152 bp overlap
Motif DE_12h DE_12h-CTCF_MA1929.2 31 bp overlap
Motif DE_12h DE_12h-CTCF_MA1929.2 31 bp overlap
Motif ES_0h ES_0h-CTCF_MA1929.2 31 bp overlap
ChIP HEK293 ENCSR000DTW.CTCF.HEK293 102 bp overlap
ChIP T-47D_NaCl-triptolide GSE111923.CTCF.T-47D_NaCl-triptolide 272 bp overlap
CTNNB1 1 dataset
ChIP hiPSC_D2 GSE132532.CTNNB1.hiPSC_D2 281 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF460KDD 179 bp overlap
E2F1 1 dataset
ChIP LNCaP_shRB GSE94958.E2F1.LNCaP_shRB 202 bp overlap
EGR1 1 dataset
ChIP T-HESCs GSE141063.EGR1.T-HESCs 330 bp overlap
ERG 1 dataset
ChIP HUVEC-C GSE124891.ERG.HUVEC-C 135 bp overlap
ESR1 3 datasets
ChIP Ishikawa_ETV4-KO2_Rescue GSE129803.ESR1.Ishikawa_ETV4-KO2_Rescue 303 bp overlap
ChIP MCF-7_aldosterone GSE99626.ESR1.MCF-7_aldosterone 554 bp overlap
ChIP MDA-MB-134-VI_ESTROGEN GSE51022.ESR1.MDA-MB-134-VI_ESTROGEN 275 bp overlap
EZH2 3 datasets
ChIP LNCaP GSE39459.EZH2.LNCaP 230 bp overlap
ChIP SU-DHL-5 GSE45982.EZH2.SU-DHL-5 132 bp overlap
ChIP prostate-cancer_plko GSE107780.EZH2.prostate-cancer_plko 142 bp overlap
FOXA1 1 dataset
ChIP breast-cancer_heregulin GSE101407.FOXA1.breast-cancer_heregulin 294 bp overlap
FOXO1 1 dataset
ChIP CD34 GSE80773.FOXO1.CD34 164 bp overlap
FOXP2 2 datasets
ChIP PFSK-1 ENCFF349WGE 237 bp overlap
ChIP PFSK1 ENCSR000BGA.FOXP2.PFSK1 152 bp overlap
GATA2 1 dataset
ChIP ME-1_CBFB-MYH11-KD GSE117138.GATA2.ME-1_CBFB-MYH11-KD 340 bp overlap
GLIS1 2 datasets
ChIP HEK293 ENCFF299RSE 350 bp overlap
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 450 bp overlap
GLIS2 1 dataset
ChIP HEK293 ENCSR535DIA.GLIS2.HEK293 421 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 458 bp overlap
GSPT2 1 dataset
ChIP HEK293T GSE35197.GSPT2.HEK293T 268 bp overlap
GTF3C2 1 dataset
ChIP H9 GSE94418.GTF3C2.H9 527 bp overlap
HAND2 2 datasets
ChIP Kelly GSE94822.HAND2.Kelly 215 bp overlap
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 554 bp overlap
HDAC2 2 datasets
ChIP MCF-7 ENCSR000BTP.HDAC2.MCF-7 228 bp overlap
ChIP RH4_Entinostat-6H GSE116344.HDAC2.RH4_Entinostat-6H 171 bp overlap
Hand1 2 datasets
Motif DE_12h DE_12h-Hand1_MA2123.1 9 bp overlap
Motif ES_0h ES_0h-Hand1_MA2123.1 9 bp overlap
IRF2 1 dataset
ChIP keratinocyte_DOX GSE135677.IRF2.keratinocyte_DOX 188 bp overlap
ISL1 1 dataset
ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 304 bp overlap
KDM6B 1 dataset
ChIP CUTLL1 GSE56694.KDM6B.CUTLL1 213 bp overlap
KLF1 3 datasets
Motif DE_12h DE_12h-KLF1_MA0493.3 8 bp overlap
Motif DE_12h DE_12h-KLF1_MA0493.3 8 bp overlap
ChIP HEK293 GSE76494.KLF1.HEK293 142 bp overlap
KLF11 1 dataset
Motif DE_12h DE_12h-KLF11_MA1512.2 10 bp overlap
KLF13 1 dataset
Motif DE_12h DE_12h-KLF13_MA0657.2 17 bp overlap
KLF15 1 dataset
ChIP HEK293 GSE76494.KLF15.HEK293 182 bp overlap
KLF16 1 dataset
Motif DE_12h DE_12h-KLF16_MA0741.1 11 bp overlap
KLF2 2 datasets
Motif DE_12h DE_12h-KLF2_MA1515.2 8 bp overlap
Motif DE_12h DE_12h-KLF2_MA1515.2 8 bp overlap
KLF3 1 dataset
Motif DE_12h DE_12h-KLF3_MA1516.2 10 bp overlap
KLF4 2 datasets
Motif DE_12h DE_12h-KLF4_MA0039.5 8 bp overlap
Motif DE_12h DE_12h-KLF4_MA0039.5 8 bp overlap
KLF5 2 datasets
Motif DE_12h DE_12h-KLF5_MA0599.1 10 bp overlap
Motif DE_12h DE_12h-KLF5_MA0599.1 10 bp overlap
KLF6 1 dataset
Motif DE_12h DE_12h-KLF6_MA1517.2 9 bp overlap
KLF7 1 dataset
ChIP HEK293 ENCSR604VWJ.KLF7.HEK293 284 bp overlap
KLF9 2 datasets
Motif DE_12h DE_12h-KLF9_MA1107.3 11 bp overlap
ChIP GBM1A GSE62211.KLF9.GBM1A 251 bp overlap
MAZ 1 dataset
ChIP HEK293 GSE76494.MAZ.HEK293 184 bp overlap
MED1 1 dataset
ChIP MCF-7_SHRARS_E2 GSE60270.MED1.MCF-7_SHRARS_E2 284 bp overlap
MTA2 1 dataset
ChIP RH4 GSE155861.MTA2.RH4 381 bp overlap
MYB 2 datasets
Motif DE_12h DE_12h-MYB_MA0100.4 6 bp overlap
Motif ES_0h ES_0h-MYB_MA0100.4 6 bp overlap
MYC 2 datasets
ChIP BE2C_SHCTR GSE70098.MYC.BE2C_SHCTR 230 bp overlap
ChIP P493-6_MST-312 GSE77061.MYC.P493-6_MST-312 136 bp overlap
MYCN 7 datasets
ChIP BE2C GSE80151.MYCN.BE2C 554 bp overlap
ChIP COG-N-415 GSE138295.MYCN.COG-N-415 420 bp overlap
ChIP Kelly GSE94822.MYCN.Kelly 336 bp overlap
ChIP Kelly GSE94822.MYCN.Kelly 64 bp overlap
ChIP Kelly_sensitive GSE115249.MYCN.Kelly_sensitive 140 bp overlap
ChIP SK-N-BE2-C GSE80151.MYCN.SK-N-BE2-C 554 bp overlap
ChIP SK-N-BE2-C GSE94822.MYCN.SK-N-BE2-C 424 bp overlap
MYF5 1 dataset
ChIP Rh18 GSE84628.MYF5.Rh18 330 bp overlap
MYOD1 2 datasets
ChIP IMR-90_GM GSE128527.MYOD1.IMR-90_GM 252 bp overlap
ChIP rhabdomyosarcoma GSE50413.MYOD1.rhabdomyosarcoma 260 bp overlap
MYOG 3 datasets
Motif DE_12h DE_12h-MYOG_MA0500.3 8 bp overlap
Motif DE_12h DE_12h-MYOG_MA0500.3 8 bp overlap
Motif ES_0h ES_0h-MYOG_MA0500.3 8 bp overlap
NCOR1 1 dataset
ChIP HEK293T_SICTR GSE35197.NCOR1.HEK293T_SICTR 220 bp overlap
NHLH1 3 datasets
Motif DE_12h DE_12h-NHLH1_MA0048.3 9 bp overlap
Motif DE_12h DE_12h-NHLH1_MA0048.3 9 bp overlap
Motif ES_0h ES_0h-NHLH1_MA0048.3 9 bp overlap
NHLH2 1 dataset
Motif DE_12h DE_12h-NHLH2_MA1529.2 16 bp overlap
Neurod2 4 datasets
Motif DE_12h DE_12h-Neurod2_MA1993.2 6 bp overlap
Motif DE_12h DE_12h-Neurod2_MA1993.2 6 bp overlap
Motif DE_12h DE_12h-Neurod2_MA1993.2 6 bp overlap
Motif ES_0h ES_0h-Neurod2_MA1993.2 6 bp overlap
OSR2 2 datasets
Motif DE_12h DE_12h-OSR2_MA1646.2 8 bp overlap
ChIP HEK293 GSE76494.OSR2.HEK293 147 bp overlap
Olig2 4 datasets
Motif DE_12h DE_12h-Olig2_MA1997.2 6 bp overlap
Motif DE_12h DE_12h-Olig2_MA1997.2 6 bp overlap
Motif DE_12h DE_12h-Olig2_MA1997.2 6 bp overlap
Motif ES_0h ES_0h-Olig2_MA1997.2 6 bp overlap
POU4F2 1 dataset
ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 135 bp overlap
POU5F1 3 datasets
ChIP BG03 GSE21614.POU5F1.BG03 201 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 322 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 152 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 299 bp overlap
RAD21 3 datasets
ChIP HCT-116 GSE131606.RAD21.HCT-116 201 bp overlap
ChIP hiPSC_CVI GSE106870.RAD21.hiPSC_CVI 210 bp overlap
ChIP hiPSC_IV8 GSE106870.RAD21.hiPSC_IV8 153 bp overlap
RBBP5 1 dataset
ChIP H1 ENCFF905HFL 554 bp overlap
RBPJ 3 datasets
Motif DE_12h DE_12h-RBPJ_MA1116.2 6 bp overlap
ChIP GSC8-11 GSE74557.RBPJ.GSC8-11 166 bp overlap
ChIP GSC8-11_12d-das GSE74557.RBPJ.GSC8-11_12d-das 185 bp overlap
RUNX1 2 datasets
ChIP Jurkat GSE85524.RUNX1.Jurkat 181 bp overlap
ChIP Jurkat GSE85524.RUNX1.Jurkat 173 bp overlap
SIRT6 1 dataset
ChIP SK-MEL-239_L-C-B GSE102813.SIRT6.SK-MEL-239_L-C-B 164 bp overlap
SMARCA4 1 dataset
ChIP NCI-H1703 GSE121755.SMARCA4.NCI-H1703 331 bp overlap
SP3 1 dataset
Motif DE_12h DE_12h-SP3_MA0746.3 11 bp overlap
SP5 1 dataset
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
SP8 1 dataset
Motif DE_12h DE_12h-SP8_MA0747.2 11 bp overlap
SP9 1 dataset
Motif DE_12h DE_12h-SP9_MA1564.2 10 bp overlap
SRSF3 1 dataset
ChIP K-562 GSE120104.SRSF3.K-562 198 bp overlap
Stat5a 1 dataset
Motif DE_12h DE_12h-Stat5a_MA1624.2 9 bp overlap
TAF15 1 dataset
ChIP K-562 ENCSR047LSJ.TAF15.K-562 197 bp overlap
TBL1X 1 dataset
ChIP HEK293T GSE35197.TBL1X.HEK293T 207 bp overlap
TBX2 3 datasets
ChIP Kelly GSE94822.TBX2.Kelly 248 bp overlap
ChIP Kelly GSE94822.TBX2.Kelly 63 bp overlap
ChIP SK-N-BE2-C GSE94822.TBX2.SK-N-BE2-C 358 bp overlap
TCF12 1 dataset
ChIP WA01 ENCSR000BIT.TCF12.WA01 203 bp overlap
TEAD4 1 dataset
ChIP hMSC-TERT4 GSE140782.TEAD4.hMSC-TERT4 222 bp overlap
TP63 2 datasets
ChIP breast-organoid GSE113909.TP63.breast-organoid 97 bp overlap
ChIP keratinocyte GSE33571.TP63.keratinocyte 157 bp overlap
TRIM28 1 dataset
ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 231 bp overlap
TWIST1 2 datasets
ChIP BE2C GSE80151.TWIST1.BE2C 554 bp overlap
ChIP SK-N-BE2-C GSE80151.TWIST1.SK-N-BE2-C 554 bp overlap
Tcf12 4 datasets
Motif DE_12h DE_12h-Tcf12_MA0521.3 6 bp overlap
Motif DE_12h DE_12h-Tcf12_MA0521.3 6 bp overlap
Motif DE_12h DE_12h-Tcf12_MA0521.3 6 bp overlap
Motif ES_0h ES_0h-Tcf12_MA0521.3 6 bp overlap
Tfcp2l1 1 dataset
Motif DE_12h DE_12h-Tfcp2l1_MA0145.2 14 bp overlap
Twist2 4 datasets
Motif DE_12h DE_12h-Twist2_MA0633.3 6 bp overlap
Motif DE_12h DE_12h-Twist2_MA0633.3 6 bp overlap
Motif DE_12h DE_12h-Twist2_MA0633.3 6 bp overlap
Motif ES_0h ES_0h-Twist2_MA0633.3 6 bp overlap
Wt1 1 dataset
Motif DE_12h DE_12h-Wt1_MA1627.2 10 bp overlap
YY1 2 datasets
ChIP K-562 ENCSR000BMH.YY1.K-562 168 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 237 bp overlap
ZBTB42 1 dataset
ChIP HEK293 GSE76494.ZBTB42.HEK293 298 bp overlap
ZBTB48 2 datasets
ChIP U2OS GSE96776.ZBTB48.U2OS 520 bp overlap
ChIP U2OS_ZBTB48-KO GSE96776.ZBTB48.U2OS_ZBTB48-KO 554 bp overlap
ZFP42 2 datasets
Motif DE_12h DE_12h-ZFP42_MA1651.2 13 bp overlap
Motif ES_0h ES_0h-ZFP42_MA1651.2 13 bp overlap
ZNF449 1 dataset
Motif DE_12h DE_12h-ZNF449_MA1656.2 10 bp overlap
ZNF460 1 dataset
Motif DE_12h DE_12h-ZNF460_MA1596.1 16 bp overlap
ZNF549 1 dataset
ChIP HEK293 GSE76494.ZNF549.HEK293 162 bp overlap
ZNF692 1 dataset
Motif DE_12h DE_12h-ZNF692_MA1986.2 8 bp overlap
ZNF708 2 datasets
Motif DE_12h DE_12h-ZNF708_MA1730.2 9 bp overlap
Motif DE_12h DE_12h-ZNF708_MA1730.2 9 bp overlap
ZNF768 2 datasets
Motif DE_12h DE_12h-ZNF768_MA1731.2 9 bp overlap
Motif ES_0h ES_0h-ZNF768_MA1731.2 9 bp overlap
ZNF93 1 dataset
Motif DE_12h DE_12h-ZNF93_MA1721.2 14 bp overlap
ZSCAN22 1 dataset
ChIP HEK293 GSE76494.ZSCAN22.HEK293 341 bp overlap
Zfp809 1 dataset
Motif DE_12h DE_12h-Zfp809_MA2125.1 9 bp overlap