chr5 : 31,889,172 31,889,784
612 bp 125 TFs 0 linked genes
This 612 bp open chromatin element has no linked target genes and is bound by 125 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:31,884,172 – 31,894,784
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
125 transcription factors
Source
Cell type
AR 11 datasets
ChIP prostate GSE56288.AR.prostate 415 bp overlap
ChIP prostate-cancer_PDX_58 GSE130408.AR.prostate-cancer_PDX_58 116 bp overlap
ChIP prostate-cancer_PDX_70 GSE130408.AR.prostate-cancer_PDX_70 109 bp overlap
ChIP prostate_1730_T GSE130408.AR.prostate_1730_T 245 bp overlap
ChIP prostate_1798_T GSE130408.AR.prostate_1798_T 132 bp overlap
ChIP prostate_1816_T GSE130408.AR.prostate_1816_T 288 bp overlap
ChIP prostate_2752_T GSE130408.AR.prostate_2752_T 85 bp overlap
ChIP prostate_P1 GSE130408.AR.prostate_P1 238 bp overlap
ChIP prostate_P27 GSE130408.AR.prostate_P27 401 bp overlap
ChIP prostate_P27_T GSE130408.AR.prostate_P27_T 248 bp overlap
ChIP prostate_P29_T GSE130408.AR.prostate_P29_T 133 bp overlap
ASCL1 1 dataset
ChIP NCI-H82 GSE69394.ASCL1.NCI-H82 122 bp overlap
BCOR 1 dataset
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 320 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 213 bp overlap
CTCF 2 datasets
Motif DE_12h DE_12h-CTCF_MA1930.2 33 bp overlap
ChIP nerve_tibial ENCSR822PJT.CTCF.nerve_tibial 197 bp overlap
CTNNB1 2 datasets
ChIP hESC_YAP-_activinA_15h GSE99202.CTNNB1.hESC_YAP-_activinA_15h 265 bp overlap
ChIP hiPSC_D2 GSE132532.CTNNB1.hiPSC_D2 229 bp overlap
DUX4 1 dataset
ChIP WA01 GSE94322.DUX4.WA01 137 bp overlap
E2F6 1 dataset
Motif DE_12h DE_12h-E2F6_MA0471.3 8 bp overlap
EOMES 1 dataset
Motif DE_12h DE_12h-EOMES_MA0800.2 9 bp overlap
ERG 1 dataset
ChIP VCaP_ETOH GSE49091.ERG.VCaP_ETOH 123 bp overlap
ESR1 1 dataset
ChIP endometrioid-adenocarcinoma_tumor_2 GSE94031.ESR1.endometrioid-adenocarcinoma_tumor_2 262 bp overlap
ETV1 2 datasets
ChIP GIST-T1 GSE106624.ETV1.GIST-T1 67 bp overlap
ChIP GIST-T1 GSE106624.ETV1.GIST-T1 173 bp overlap
ETV5::FOXO1 2 datasets
Motif DE_12h DE_12h-ETV5FOXO1_MA1947.2 10 bp overlap
Motif DE_12h DE_12h-ETV5FOXO1_MA1947.2 10 bp overlap
EZH2 1 dataset
ChIP hepatocyte ENCFF118DKH 229 bp overlap
FEZF1 3 datasets
ChIP HEK293 ENCFF528YED 273 bp overlap
ChIP HEK293 ENCSR827NWO.FEZF1.HEK293 319 bp overlap
ChIP HEK293 GSE76494.FEZF1.HEK293 269 bp overlap
FOXA1 5 datasets
ChIP HEK293_eGFP_TFS GSE123618.FOXA1.HEK293_eGFP_TFS 117 bp overlap
ChIP LNCaP GSE56288.FOXA1.LNCaP 262 bp overlap
ChIP NCI-H3122 GSE39998.FOXA1.NCI-H3122 167 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 229 bp overlap
ChIP prostate_P29 GSE130408.FOXA1.prostate_P29 231 bp overlap
FOXA2 1 dataset
Motif DE_12h DE_12h-FOXA2_MA0047.4 8 bp overlap
FOXA3 1 dataset
Motif DE_12h DE_12h-FOXA3_MA1683.2 7 bp overlap
FOXB1 1 dataset
Motif DE_12h DE_12h-FOXB1_MA0845.1 11 bp overlap
FOXC1 1 dataset
Motif DE_12h DE_12h-FOXC1_MA0032.2 11 bp overlap
FOXC2 1 dataset
Motif DE_12h DE_12h-FOXC2_MA0846.2 11 bp overlap
FOXD3 1 dataset
Motif DE_12h DE_12h-FOXD3_MA0041.3 14 bp overlap
FOXE1 1 dataset
Motif DE_12h DE_12h-FOXE1_MA1487.3 12 bp overlap
FOXF1 2 datasets
ChIP GIST-T1 GSE106624.FOXF1.GIST-T1 85 bp overlap
ChIP GIST48_siETV1 GSE106624.FOXF1.GIST48_siETV1 159 bp overlap
FOXI1 1 dataset
Motif DE_12h DE_12h-FOXI1_MA0042.2 7 bp overlap
FOXN3 1 dataset
Motif DE_12h DE_12h-FOXN3_MA1489.1 8 bp overlap
FOXP1 1 dataset
Motif DE_12h DE_12h-FOXP1_MA0481.4 7 bp overlap
FOXP4 1 dataset
Motif DE_12h DE_12h-FOXP4_MA2117.1 7 bp overlap
FOXS1 1 dataset
Motif DE_12h DE_12h-FOXS1_MA2118.1 8 bp overlap
Foxj3 1 dataset
Motif DE_12h DE_12h-Foxj3_MA0851.2 9 bp overlap
Foxl2 1 dataset
Motif DE_12h DE_12h-Foxl2_MA1607.2 10 bp overlap
GFI1 1 dataset
Motif DE_12h DE_12h-GFI1_MA0038.3 11 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 456 bp overlap
GTF2B 1 dataset
ChIP HeLa_ASYNC GSE71848.GTF2B.HeLa_ASYNC 194 bp overlap
Gli1 1 dataset
Motif DE_12h DE_12h-Gli1_MA1990.2 10 bp overlap
HNF1B 1 dataset
Motif DE_12h DE_12h-HNF1B_MA0153.2 13 bp overlap
HOXB13 3 datasets
ChIP prostate-cancer_PDX_70 GSE130408.HOXB13.prostate-cancer_PDX_70 72 bp overlap
ChIP prostate_P29 GSE130408.HOXB13.prostate_P29 167 bp overlap
ChIP prostate_P29_T GSE130408.HOXB13.prostate_P29_T 202 bp overlap
HOXC13 1 dataset
Motif DE_12h DE_12h-HOXC13_MA0907.2 9 bp overlap
IRF3 1 dataset
Motif DE_12h DE_12h-IRF3_MA1418.2 17 bp overlap
IRF4 1 dataset
Motif DE_12h DE_12h-IRF4_MA1419.2 14 bp overlap
IRF5 1 dataset
Motif DE_12h DE_12h-IRF5_MA1420.1 14 bp overlap
IRF6 1 dataset
Motif DE_12h DE_12h-IRF6_MA1509.1 9 bp overlap
IRF8 1 dataset
Motif DE_12h DE_12h-IRF8_MA0652.2 13 bp overlap
IRF9 1 dataset
Motif DE_12h DE_12h-IRF9_MA0653.1 15 bp overlap
JARID2 1 dataset
ChIP MRC-5_IPS25_CTR GSE48515.JARID2.MRC-5_IPS25_CTR 190 bp overlap
KLF5 1 dataset
Motif DE_12h DE_12h-KLF5_MA0599.1 10 bp overlap
MAZ 1 dataset
Motif DE_12h DE_12h-MAZ_MA1522.2 8 bp overlap
MEIS1 1 dataset
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
NANOG 7 datasets
ChIP GM23338 ENCFF065NZG 311 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 552 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 612 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 404 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 201 bp overlap
ChIP hESC GSE18292.NANOG.hESC 195 bp overlap
ChIP hESC GSE20650.NANOG.hESC 151 bp overlap
NEUROD1 2 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 220 bp overlap
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 280 bp overlap
NEUROG2 3 datasets
ChIP MRC-5_NFD_02DPT GSE75910.NEUROG2.MRC-5_NFD_02DPT 193 bp overlap
ChIP MRC-5_NFD_05DPT GSE75910.NEUROG2.MRC-5_NFD_05DPT 216 bp overlap
ChIP MRC-5_N_05DPT GSE75910.NEUROG2.MRC-5_N_05DPT 205 bp overlap
NFYA 1 dataset
Motif DE_12h DE_12h-NFYA_MA0060.4 8 bp overlap
NFYC 1 dataset
Motif DE_12h DE_12h-NFYC_MA1644.2 7 bp overlap
NIPBL 1 dataset
ChIP hESC_WNT3A_ACTIVIN GSE64758.NIPBL.hESC_WNT3A_ACTIVIN 286 bp overlap
NKX2-1 1 dataset
ChIP NCI-H3122 GSE39998.NKX2-1.NCI-H3122 93 bp overlap
NKX3-1 1 dataset
ChIP islet ERP004003.NKX3-1.islet 202 bp overlap
NR1I3 1 dataset
Motif DE_12h DE_12h-NR1I3_MA1534.2 8 bp overlap
OSR1 1 dataset
Motif DE_12h DE_12h-OSR1_MA1542.2 8 bp overlap
OSR2 3 datasets
Motif DE_12h DE_12h-OSR2_MA1646.2 8 bp overlap
ChIP HEK293 ENCFF875BDB 285 bp overlap
ChIP HEK293 ENCSR324LTM.OSR2.HEK293 215 bp overlap
PDX1 1 dataset
ChIP hiPSC GSE125768.PDX1.hiPSC 117 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 396 bp overlap
PKNOX1 2 datasets
ChIP HEK293T ENCFF174WDB 326 bp overlap
ChIP HEK293T ENCSR233FAG.PKNOX1.HEK293T 270 bp overlap
POLR2A 4 datasets
ChIP gastroesophageal sphincter ENCFF070PCA 161 bp overlap
ChIP sigmoid colon ENCFF725QFT 217 bp overlap
ChIP sigmoid colon ENCFF748YVT 260 bp overlap
ChIP stomach ENCFF278MYS 231 bp overlap
POU4F1 1 dataset
Motif DE_12h DE_12h-POU4F1_MA0790.2 12 bp overlap
POU4F2 1 dataset
Motif DE_12h DE_12h-POU4F2_MA0683.2 15 bp overlap
POU4F3 1 dataset
Motif DE_12h DE_12h-POU4F3_MA0791.2 12 bp overlap
POU5F1 4 datasets
ChIP HUES-8 GSE109524.POU5F1.HUES-8 581 bp overlap
ChIP NCCIT GSE36134.POU5F1.NCCIT 315 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 612 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 518 bp overlap
PRDM6 3 datasets
ChIP HEK293 ENCFF283AJL 185 bp overlap
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 228 bp overlap
ChIP HEK293 GSE76494.PRDM6.HEK293 152 bp overlap
RAD21 4 datasets
ChIP HAP1 GSE152721.RAD21.HAP1 400 bp overlap
ChIP HAP1 GSE126634.RAD21.HAP1 446 bp overlap
ChIP HAP1_CTCF GSE126634.RAD21.HAP1_CTCF 424 bp overlap
ChIP HAP1_clone25 GSE152721.RAD21.HAP1_clone25 318 bp overlap
RARA 3 datasets
Motif DE_12h DE_12h-RARA_MA0729.1 18 bp overlap
ChIP hiPSC_D3 GSE109172.RARA.hiPSC_D3 246 bp overlap
ChIP hiPSC_D4 GSE109172.RARA.hiPSC_D4 307 bp overlap
RORA 1 dataset
Motif DE_12h DE_12h-RORA_MA0072.2 11 bp overlap
Rarb 1 dataset
Motif DE_12h DE_12h-Rarb_MA0858.1 17 bp overlap
SCRT1 1 dataset
Motif DE_12h DE_12h-SCRT1_MA0743.3 10 bp overlap
SCRT2 1 dataset
Motif DE_12h DE_12h-SCRT2_MA0744.3 10 bp overlap
SIX2 3 datasets
ChIP HEK GSE73865.SIX2.HEK 222 bp overlap
ChIP kidney_fetal_16w GSE75948.SIX2.kidney_fetal_16w 151 bp overlap
ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 157 bp overlap
SMAD2 1 dataset
ChIP hESC_YAP-_activinA_15h GSE99202.SMAD2.hESC_YAP-_activinA_15h 315 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 309 bp overlap
SMARCA4 5 datasets
ChIP Aska-SS GSE108025.SMARCA4.Aska-SS 281 bp overlap
ChIP NPC_K755R-siAP GSE122631.SMARCA4.NPC_K755R-siAP 180 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 448 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 517 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 442 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 268 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 424 bp overlap
SMARCC1 5 datasets
ChIP Aska-SS GSE108025.SMARCC1.Aska-SS 589 bp overlap
ChIP Aska-SS_shSSX GSE108025.SMARCC1.Aska-SS_shSSX 112 bp overlap
ChIP SK-N-MC_shEWSFLI1 GSE94275.SMARCC1.SK-N-MC_shEWSFLI1 307 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 458 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 575 bp overlap
SOX2 2 datasets
ChIP HNSC GSE69479.SOX2.HNSC 293 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 381 bp overlap
SP1 1 dataset
Motif DE_12h DE_12h-SP1_MA0079.5 9 bp overlap
SP4 1 dataset
Motif DE_12h DE_12h-SP4_MA0685.2 9 bp overlap
SP5 2 datasets
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
SPIB 1 dataset
Motif DE_12h DE_12h-SPIB_MA0081.3 13 bp overlap
SS18 1 dataset
ChIP Aska-SS_BAF47KO1 GSE108025.SS18.Aska-SS_BAF47KO1 591 bp overlap
Sox6 1 dataset
Motif DE_12h DE_12h-Sox6_MA0515.1 10 bp overlap
Stat2 1 dataset
Motif DE_12h DE_12h-Stat2_MA1623.2 10 bp overlap
Stat5a 1 dataset
Motif DE_12h DE_12h-Stat5a_MA1624.2 9 bp overlap
T 1 dataset
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 284 bp overlap
TBR1 1 dataset
Motif DE_12h DE_12h-TBR1_MA0802.2 9 bp overlap
TBX2 1 dataset
Motif DE_12h DE_12h-TBX2_MA0688.2 9 bp overlap
TBX3 1 dataset
Motif DE_12h DE_12h-TBX3_MA1566.3 9 bp overlap
TEAD1 1 dataset
Motif DE_12h DE_12h-TEAD1_MA0090.4 9 bp overlap
TEAD3 1 dataset
Motif DE_12h DE_12h-TEAD3_MA0808.1 8 bp overlap
TEAD4 1 dataset
Motif DE_12h DE_12h-TEAD4_MA0809.3 8 bp overlap
TP53 1 dataset
ChIP hESC_DIFF GSE39912.TP53.hESC_DIFF 308 bp overlap
YY1 2 datasets
ChIP H1 ENCFF524BTL 337 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 154 bp overlap
Yy1 1 dataset
Motif DE_12h DE_12h-Yy1_MA0095.4 8 bp overlap
ZBTB42 1 dataset
ChIP HEK293 GSE76494.ZBTB42.HEK293 234 bp overlap
ZKSCAN5 2 datasets
Motif DE_12h DE_12h-ZKSCAN5_MA1652.2 9 bp overlap
Motif DE_12h DE_12h-ZKSCAN5_MA1652.2 9 bp overlap
ZNF263 2 datasets
Motif DE_12h DE_12h-ZNF263_MA0528.3 7 bp overlap
Motif DE_12h DE_12h-ZNF263_MA0528.3 7 bp overlap
ZNF341 1 dataset
Motif DE_12h DE_12h-ZNF341_MA1655.2 8 bp overlap
ZNF354A 2 datasets
Motif DE_12h DE_12h-ZNF354A_MA1978.2 20 bp overlap
Motif DE_12h DE_12h-ZNF354A_MA1978.2 20 bp overlap
ZNF382 1 dataset
Motif DE_12h DE_12h-ZNF382_MA1594.1 24 bp overlap
ZNF449 2 datasets
ChIP HEK293 ENCFF764ZIC 411 bp overlap
ChIP HEK293 ENCSR738SLS.ZNF449.HEK293 439 bp overlap
ZNF467 1 dataset
ChIP HEK293 GSE76494.ZNF467.HEK293 146 bp overlap
ZNF528 1 dataset
Motif DE_12h DE_12h-ZNF528_MA1597.1 17 bp overlap
ZNF530 1 dataset
Motif DE_12h DE_12h-ZNF530_MA1981.2 14 bp overlap
ZNF652 1 dataset
Motif DE_12h DE_12h-ZNF652_MA1657.2 9 bp overlap
ZNF660 2 datasets
ChIP HEK293 ENCFF282RUS 238 bp overlap
ChIP HEK293 ENCSR283DOU.ZNF660.HEK293 379 bp overlap
ZNF680 1 dataset
Motif DE_12h DE_12h-ZNF680_MA1729.2 11 bp overlap
ZNF684 1 dataset
Motif DE_12h DE_12h-ZNF684_MA1600.2 14 bp overlap
ZNF736 1 dataset
ChIP HEK293T GSE78099.ZNF736.HEK293T 162 bp overlap